Basic Information

Insect: Hemistola chrysoprasaria
Gene Symbol: -
Assembly: GCA_947063395.1
Location: OX346723.1:3617393-3622131[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.4e-05 0.0027 18.7 3.1 1 23 151 173 151 173 0.98

2 11 6.7e-05 0.0054 17.8 0.3 2 23 186 207 185 207 0.97

3 11 0.0011 0.085 14.0 5.0 3 20 216 233 214 236 0.93

4 11 0.0043 0.34 12.1 1.6 1 23 242 265 242 265 0.96

5 11 1.5e-05 0.0012 19.8 0.8 1 23 271 293 271 293 0.97

6 11 2.6e-06 0.00021 22.2 1.1 1 23 299 321 299 321 0.95

7 11 8.6e-06 0.00069 20.6 0.5 1 23 327 349 327 349 0.97

8 11 3.4e-05 0.0028 18.7 1.7 1 23 355 377 355 377 0.98

9 11 0.00017 0.014 16.5 3.0 1 23 383 405 383 405 0.98

10 11 8.4e-07 6.8e-05 23.8 1.8 1 23 411 433 411 433 0.98

11 11 3.2e-06 0.00026 21.9 0.2 1 23 439 461 439 461 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.4e-05	0.0027	18.7	3.1	1	23	151	173	151	173	0.98
2	11	6.7e-05	0.0054	17.8	0.3	2	23	186	207	185	207	0.97
3	11	0.0011	0.085	14.0	5.0	3	20	216	233	214	236	0.93
4	11	0.0043	0.34	12.1	1.6	1	23	242	265	242	265	0.96
5	11	1.5e-05	0.0012	19.8	0.8	1	23	271	293	271	293	0.97
6	11	2.6e-06	0.00021	22.2	1.1	1	23	299	321	299	321	0.95
7	11	8.6e-06	0.00069	20.6	0.5	1	23	327	349	327	349	0.97
8	11	3.4e-05	0.0028	18.7	1.7	1	23	355	377	355	377	0.98
9	11	0.00017	0.014	16.5	3.0	1	23	383	405	383	405	0.98
10	11	8.4e-07	6.8e-05	23.8	1.8	1	23	411	433	411	433	0.98
11	11	3.2e-06	0.00026	21.9	0.2	1	23	439	461	439	461	0.98

Sequence Information

Coding Sequence: ATGGCTACAATAAACATTCCCGAAGATGTATCTATTTGCTGCCGGACATGTTTAAATGGAGCATCTAATAATATGTACGACATATTCGACGACAGGGATGATTATTTCAATGTTGCTAAGATGTTAGCAACTTGCACTACTATTCAGCTAGACGCAACAGACAATAAAATGCCAAAGAGACTCTGCAGAAGTTGCTATCACTGTCTCATGAGTTTCTACGACTTCAAGAAACTAGCCGAGGAAATTGACAAAAAACTCAACGACAGACTCACTTTACTAGCACTACCTATAAAAGATGAAGAAGATGATGAAAATATATACTCTATTATCAAAAATGAAGCTAACTCCTCCGAAGATCTACCAGACAATCAGACAGATAGTGACGATGAAGtcttgtacaaaaaaaaaattcaacataAATCCAAGTTCAAATGGATGAGAGGTGAAACTTATACTTGCCCTATTTGTTCACAAAAATTCAAGTACCAAAACAGTTACCTCAAACACATGACAAAACACGAAAATGAAATAGCAAACCAAGACGACTTTAAAATACAATGTGACATGTGCCCAGCGAATTTCAAGTCTCAAAACTCACTGGCAGCTCATAAACGGAAGCATGTATCAAAAAATAGGGTCTTAGCATGTAAGTTCTGTGGaaaaatattcaagaaaaccAGCCATTTGAAAAGACACGAGCTTTGTCATGATGACAACAGGCCTTTCAAATGTACGCAGTGTACTAAATCGTTTTTACATGAAGGTGATTTGCTAGACCATGTAAATATCAAGCATGTAGGCATAAGGCCTCATATATGCCCGATTTGTACAAAAGGCTTCAGTAATATGTCAGTTTTGTCCAATCATATAAAGACACATACAAGGGAGAGACCGTATCTGTGTCCAACTTGTGGAAAGAGGTTTGATTCTAGTACGAATTTGAAGCAGCATGTGACAAGGCATCTTGGTCTGAAGACTTTTGAATGCGATTTGTGCCCAAAGAAGTTTGTTACAAAAGGTGAATTAAAGTCACATAAAGGCACGCATACAGGAGTAAAGCCGTATTCTTGTGAGCAGTGCGGGGGAACATTCACTAAGTATAGCTCATTGAAGAAGCATAGCCTCACACATCTTGGAGTTAAACCTTTTCAATGCGACTCTTGTCCTATGAAGTTTACGTTTAAAGAGCACCTGAAAGTCCACAATCGTATCCATACAGGCGAGAAACCGTACCGCTGTGAACATTGCGATCGAGCGTTCACACAGAGCGGCGATCTCTTGAAACACAAGCGAGCGCACTTCGGCGATCATttgtataaGTGCGACGACTGTGACGAAGGCTTCAGACTGAAATCGGAACTGAGAGACCACATCACAATACATTATGTGTCTAAAAAAAGTAAACAATTCGATTCTACGAGTATATCTActaaagatttgaaagaaactAATAATTTGGAAGTTACGAATGCTGGTATGATTTTGTAA
Protein Sequence: MATINIPEDVSICCRTCLNGASNNMYDIFDDRDDYFNVAKMLATCTTIQLDATDNKMPKRLCRSCYHCLMSFYDFKKLAEEIDKKLNDRLTLLALPIKDEEDDENIYSIIKNEANSSEDLPDNQTDSDDEVLYKKKIQHKSKFKWMRGETYTCPICSQKFKYQNSYLKHMTKHENEIANQDDFKIQCDMCPANFKSQNSLAAHKRKHVSKNRVLACKFCGKIFKKTSHLKRHELCHDDNRPFKCTQCTKSFLHEGDLLDHVNIKHVGIRPHICPICTKGFSNMSVLSNHIKTHTRERPYLCPTCGKRFDSSTNLKQHVTRHLGLKTFECDLCPKKFVTKGELKSHKGTHTGVKPYSCEQCGGTFTKYSSLKKHSLTHLGVKPFQCDSCPMKFTFKEHLKVHNRIHTGEKPYRCEHCDRAFTQSGDLLKHKRAHFGDHLYKCDDCDEGFRLKSELRDHITIHYVSKKSKQFDSTSISTKDLKETNNLEVTNAGMIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -