Basic Information

Insect: Hemistola chrysoprasaria
Gene Symbol: -
Assembly: GCA_947063395.1
Location: OX346736.1:5724722-5729932[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.3 24 6.3 2.3 3 23 64 84 63 84 0.97

2 33 0.68 54 5.2 0.0 2 23 105 127 104 127 0.93

3 33 0.078 6.3 8.1 0.8 2 23 148 170 147 170 0.93

4 33 0.00082 0.066 14.4 0.4 2 19 178 195 177 198 0.94

5 33 0.014 1.1 10.5 3.4 1 23 240 263 240 263 0.98

6 33 0.00017 0.014 16.5 0.1 2 23 338 360 337 360 0.90

7 33 0.00024 0.019 16.1 1.9 2 23 365 387 364 387 0.91

8 33 0.00083 0.067 14.4 2.8 2 23 392 414 391 414 0.93

9 33 0.12 9.9 7.5 0.7 1 23 419 442 419 442 0.94

10 33 0.41 33 5.9 5.1 1 23 446 469 446 469 0.96

11 33 0.67 54 5.2 4.9 1 23 501 523 501 523 0.98

12 33 0.42 34 5.9 0.1 2 23 544 566 543 566 0.91

13 33 0.017 1.4 10.2 0.8 1 23 586 609 586 609 0.95

14 33 0.054 4.3 8.7 2.0 1 19 615 633 615 635 0.96

15 33 0.0022 0.18 13.0 2.6 1 23 678 701 678 701 0.98

16 33 0.0002 0.016 16.3 0.0 2 22 776 796 775 798 0.89

17 33 0.00046 0.037 15.2 0.3 3 23 804 825 802 825 0.94

18 33 0.0026 0.21 12.8 3.9 2 23 830 852 829 852 0.95

19 33 0.24 19 6.6 0.6 1 23 857 880 857 880 0.93

20 33 0.027 2.2 9.6 6.2 1 23 884 907 884 907 0.97

21 33 0.0026 0.21 12.8 0.4 2 23 914 935 913 935 0.96

22 33 0.0046 0.37 12.0 3.5 1 23 941 963 941 963 0.98

23 33 1.3 1e+02 4.4 0.0 2 23 993 1015 992 1015 0.90

24 33 0.078 6.3 8.1 0.8 2 23 1036 1058 1035 1058 0.93

25 33 1.5 1.2e+02 4.1 1.0 2 19 1066 1083 1063 1086 0.94

26 33 0.21 17 6.8 1.4 1 23 1128 1151 1128 1151 0.96

27 33 0.00034 0.027 15.6 0.1 2 22 1226 1246 1225 1248 0.89

28 33 0.0029 0.23 12.6 0.1 3 23 1254 1275 1252 1275 0.94

29 33 0.01 0.82 10.9 4.3 2 23 1280 1302 1279 1302 0.94

30 33 0.24 19 6.6 0.5 1 23 1307 1330 1307 1330 0.93

31 33 0.0021 0.17 13.1 4.1 1 23 1334 1357 1334 1357 0.97

32 33 0.0034 0.27 12.4 0.6 2 23 1364 1385 1363 1385 0.96

33 33 0.0022 0.18 13.0 3.1 1 23 1391 1413 1391 1413 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.3	24	6.3	2.3	3	23	64	84	63	84	0.97
2	33	0.68	54	5.2	0.0	2	23	105	127	104	127	0.93
3	33	0.078	6.3	8.1	0.8	2	23	148	170	147	170	0.93
4	33	0.00082	0.066	14.4	0.4	2	19	178	195	177	198	0.94
5	33	0.014	1.1	10.5	3.4	1	23	240	263	240	263	0.98
6	33	0.00017	0.014	16.5	0.1	2	23	338	360	337	360	0.90
7	33	0.00024	0.019	16.1	1.9	2	23	365	387	364	387	0.91
8	33	0.00083	0.067	14.4	2.8	2	23	392	414	391	414	0.93
9	33	0.12	9.9	7.5	0.7	1	23	419	442	419	442	0.94
10	33	0.41	33	5.9	5.1	1	23	446	469	446	469	0.96
11	33	0.67	54	5.2	4.9	1	23	501	523	501	523	0.98
12	33	0.42	34	5.9	0.1	2	23	544	566	543	566	0.91
13	33	0.017	1.4	10.2	0.8	1	23	586	609	586	609	0.95
14	33	0.054	4.3	8.7	2.0	1	19	615	633	615	635	0.96
15	33	0.0022	0.18	13.0	2.6	1	23	678	701	678	701	0.98
16	33	0.0002	0.016	16.3	0.0	2	22	776	796	775	798	0.89
17	33	0.00046	0.037	15.2	0.3	3	23	804	825	802	825	0.94
18	33	0.0026	0.21	12.8	3.9	2	23	830	852	829	852	0.95
19	33	0.24	19	6.6	0.6	1	23	857	880	857	880	0.93
20	33	0.027	2.2	9.6	6.2	1	23	884	907	884	907	0.97
21	33	0.0026	0.21	12.8	0.4	2	23	914	935	913	935	0.96
22	33	0.0046	0.37	12.0	3.5	1	23	941	963	941	963	0.98
23	33	1.3	1e+02	4.4	0.0	2	23	993	1015	992	1015	0.90
24	33	0.078	6.3	8.1	0.8	2	23	1036	1058	1035	1058	0.93
25	33	1.5	1.2e+02	4.1	1.0	2	19	1066	1083	1063	1086	0.94
26	33	0.21	17	6.8	1.4	1	23	1128	1151	1128	1151	0.96
27	33	0.00034	0.027	15.6	0.1	2	22	1226	1246	1225	1248	0.89
28	33	0.0029	0.23	12.6	0.1	3	23	1254	1275	1252	1275	0.94
29	33	0.01	0.82	10.9	4.3	2	23	1280	1302	1279	1302	0.94
30	33	0.24	19	6.6	0.5	1	23	1307	1330	1307	1330	0.93
31	33	0.0021	0.17	13.1	4.1	1	23	1334	1357	1334	1357	0.97
32	33	0.0034	0.27	12.4	0.6	2	23	1364	1385	1363	1385	0.96
33	33	0.0022	0.18	13.0	3.1	1	23	1391	1413	1391	1413	0.98

Sequence Information

Coding Sequence: ATGATCGTCTTGAGATTTTGTTACCGACTCATCCCTCAGCCGCAGAAAACAATCGAAACGAAATGTTACATCAAGAATAATTTCGTTTCAGAGACGGTGAGCGCAGCCGCTGAATGTCGcagagaaaacttaaaactgatTCTTAATTACACCTCTATAATACCATTCAAGTGGAAAGAACAAAACAATTGTTTCTACTGTGGAAAAGCTGAAACTGATTATACAAAATTCAGAAAACACACTAAATCACACGGCCTATGTACTGACAGGTTCCTCCAAGAAAGCGATATTTGGATTGATGTGTCAGAAATTTCCTGCGAAATTTGCGAGACAGAATTTGAAAGCTTGGAGTTAATTTTGGATCATTTGACTAAAGAGCATTCGAAAATATACCATAGAAATATAGAAACAGCTTTTTCACAATATCGTTTGCGTGATTTAAAATGTGTTGTTTGCGTTAAATATTTTAAGGATTTCAAATACTTGGTACAGCATACAAAAGATGAACATCCGAACGCAGAATGCCAAAACACCTGCGATATTTGCTTAAAAACATTCACTACATCTAGCGAGTTGACTCTGCATTCTTCCAATTCTGATATGAAAACAAAAGAATCGacaaaaagtgaaaaaaatacTCTCTTCCAGCGAATACGAGAGAATATTCAATGTGTTATTAACATGTCCACAGCAGTACcctttaaattcaaatcaacaTTCAGATGTTTCTACTGCACACAGTTTTTCAACGACTGTGATGCGGTTATATCTCACACGCGTACGGAGCACCCCTTCTGCGAACTTAAATCGAGAGCAATGAAAGGATGCAAGTCAGAAAAGCCTCGCGTTAAAATAGATATAAACCATCTAGCGTGCAAACTCTGCCAACAACCGATGGCCGACTTAACCACCTTCGTAGACCACGCTATTGAAAAACACGAAGCGAAATATGATAAATCTATATCTATTACCGCGTGCTTCGAGCAGTTTCGACTTATCCAAAGTGCTTTACCGTGTCCAGATTGTGGGCTTACTTTTACTTACTTTGCGACATTGCTAAGGCATATGGGGGCAAAGCACAGTTACGGATCGGTTTGTGTATATTGCGGACGATGTTTTAGAAATGCTACTAACCTAGACAGGCATGTAGCTCATGAGCACACGGGCAAGTGCGAGTGTACAATATGCGGCATTAAATGTAAAAACTCTTCGACTTTAGCGAGTCACATGGCTCAATACCACGGCGCGAAAGATTTTAAGTGCTCGCAGTGTCCGGAGTTATTTGAATCACTTTACAAAAAGCAGAAGCATCTTATCGAAGTTCATAATATTGGACACAAATGTTCGTATTGTCTGAGAATGTTTACTAAGTATTCACGTATGGTAAATCATGAAAAGAGGACGCACTCAGAGGAACAAACATTCGCAGAATGTCGgagagaaaacttaaaactgatTTTTAATTACACCTCTATAATACCATTTAAGTGGAAAGAACATTTCAAATGCTTCTACTGTAAAAAATCTGAAACTGATTATACAACATTCAGAGAACACACCAAATCCCACGGCCTATGTACTGACATGGCCCTGAGGGATAACGTAATTAAAATTGATGCTACAGAAATCTCCTGCAAAATTTGCAAAACGGAATTCGAAAGCTTGGAGCTAATTTTGGATCACTTAATTAACGAGCATTCAAAAATATACCATAAAAATATCGATACAGCTGTTTTACAATACCGTCTGCGTGACTTTAAATGTGTAACCTGCGATAAACAACTCAAAGACTTACAATACTTAATACAGCATACAAAAGATGAACATCCGAACGCAGAATGCCACACCTGCGATTTTTGCTTAAAAACATTCGCTACATATAACGAATTGACGCAACATTCATTCAATTGTGTTATGAAAACAAAAGAACCAACGAAAAGTGAAAAAATGGCTCTCCACGAGCGTATAAGAAAAAATATCCGTTGTGTTATTAACATGTCGACAGCAATACCCTTTAAATTCAAATCGACTTTCAGATGTTTCTATTGCACACAGTCTTTCATTGACTGTGACGAGGTCATATCTCACACGCGTACGGAGCACCCCATTTGCGAACTGAAATCGAGAGCAATGAAAGGATGTAAGTCAGAAAAGCCACGCGTTAAAATCGATATAAACCATCTCGCGTGCAAGCTCTGCCTACAACCGATGACCGACTTAACCACCTTCGTAGACCACGCTATTGAAAAACATGACGCGAACTATGATAAATCTATATCTATCACAGCGTGCTTCGAGCCATTTCAACTCGTCCAAAGTGGGATACCGTGTCCAGATTGTGGGCAAACTTTTACTTACTTTGCGACATTGCTGAGACATATTGGGGCGGAGCACAGTCATATATCAATCTGTGTTCATTGCGGACGTGGTTTTAGGAGTGCCTCTAGTTTAGACTCACATATTTCTAATGCACACACGGGCATGTGTAAATGTTCAATTTGTGGCACGAAATGTAAAAACGCTCAGACATTAGCGAGTCACATGGCTCGATACCACTACGGGAAAGATTTTAAGTGCTCGCAGTGTCCGGAGCTATTTGAAACAGTTTACAAAAAGCAAAAGCATCTTATCGAAGTTCATAATATTGGACACAAATGTTCGCATTGCGGGAGTTCGTTTACTACGTATTCCCGCATGGTAAATCATGTTAAGAGAAAACACTTAAAGGAACGAACTGTGCCGTGCTCGATATGTGACTTAAAGTTCTTCGATCAACAACAAATGAAGCTGCACATGGTGAAACATGAGGGTGAGAGACGGTTCCGATGCGATATTTGCCACAAGGCATTTTTATGGAAGAAGAATTTGAAATCTCATATGAAAAGTCACATTATGGTAAAACACACCAAATCCCACGGCCTATGTACTGACAGGATCCTCAAAGATAGCGTTATTTGGATTGATGTGTCAGAAATTTCCTGCGAAATTTGCGAGACTGAATTCGAGAGCTTGGAATTAATTTTGGATCATTTGACTAACGATCATTTGAAAATATACCATAGAAATATTGAAACAAGTTTTTTACAATACCGTCTGCGTGATTTAAAATGTGTTGTTTGCGTTAAATATTTCAAAGACTTCAAATACTTGGTACAGCATACAAAAGATGAACATGCGAACACAAAATGCCCCAAAACCTGCGATTTTTGCTTAAACACATTCGTTTCATCTAACGAATTGACGGTACATTCTTCCAATTGTGATTTGAAAATAAAAGAACCCACAAAGGGTGAAAAAATGGCTCTCTTCCAGCGTATAAGAAAGAATATCCAATGTGTTATTAACATGTCGACAGCAGTACCCTTTAAATTCAAAGCAAAATTCAAATGTTTCTACTGCACACAGTTGTTCATCGACTGTGAAGCGGTCATAACTCACACGCGTGCGGAGCACCCCTTCTGCGATCTTAAATTGAGAGCACTCAAAGAATGTAAGTCGGACAAGCCTCGTGTTAAAATAGATATAAACCATCTGGCGTGCAAACTCTGCCAACAACCTATGGCCGACTTAACTACCTTCGTTGACCACGCTATTGAAAAACACGAAGCGAAGTATGATAAATCTATACCTATTACCGCGTGCTTCGAACAATTTCGACTCATCCAACGTGGAATACCATGTCTTGATTGTGGGAAAACTTTTACTTATTTTGCGACATTGCTAAGGCATATTGGGGCAGAGCACAGTGATAGATCGATCTGTGTTTATTGCGGACGTGGTTTCAGGAGTGCCACAAGTTTAGACATGCATATTTCTAATATGCACACGGGGATGTGTGATTGTTCAATTTGCGGCACCAAATGTAAAAACTCACAGACATTAGGGCGGCACATGGCTCGATACCACGACGTGAAGGATTACAAGTGCTCGCAGTGTCCGGAGCTGTTTGAATCAGTTTACAAAAAGCAAAAGCATCTTATCGAAGTTCATAATATTGGACATAAATGTTCGTATTGCGGGAGCATGTTTACTAAGAATTCTTTTATGGAAAATCATGTAAGGCGGACGCACTTAAAGGAACGAACAGTGCCGTGCTCAATTTGTAACTTAAAGTTTTTCGACCAAAGACAAATGAAGCTGCACATGGTGAAACATGACGGCGAGAGACGATTCCGATGCGATATTTGCCACAAGGCGTTTTTATGGAAGAAAAATTTGCGATCTCATATGAACACTCACAATAGGgtataa
Protein Sequence: MIVLRFCYRLIPQPQKTIETKCYIKNNFVSETVSAAAECRRENLKLILNYTSIIPFKWKEQNNCFYCGKAETDYTKFRKHTKSHGLCTDRFLQESDIWIDVSEISCEICETEFESLELILDHLTKEHSKIYHRNIETAFSQYRLRDLKCVVCVKYFKDFKYLVQHTKDEHPNAECQNTCDICLKTFTTSSELTLHSSNSDMKTKESTKSEKNTLFQRIRENIQCVINMSTAVPFKFKSTFRCFYCTQFFNDCDAVISHTRTEHPFCELKSRAMKGCKSEKPRVKIDINHLACKLCQQPMADLTTFVDHAIEKHEAKYDKSISITACFEQFRLIQSALPCPDCGLTFTYFATLLRHMGAKHSYGSVCVYCGRCFRNATNLDRHVAHEHTGKCECTICGIKCKNSSTLASHMAQYHGAKDFKCSQCPELFESLYKKQKHLIEVHNIGHKCSYCLRMFTKYSRMVNHEKRTHSEEQTFAECRRENLKLIFNYTSIIPFKWKEHFKCFYCKKSETDYTTFREHTKSHGLCTDMALRDNVIKIDATEISCKICKTEFESLELILDHLINEHSKIYHKNIDTAVLQYRLRDFKCVTCDKQLKDLQYLIQHTKDEHPNAECHTCDFCLKTFATYNELTQHSFNCVMKTKEPTKSEKMALHERIRKNIRCVINMSTAIPFKFKSTFRCFYCTQSFIDCDEVISHTRTEHPICELKSRAMKGCKSEKPRVKIDINHLACKLCLQPMTDLTTFVDHAIEKHDANYDKSISITACFEPFQLVQSGIPCPDCGQTFTYFATLLRHIGAEHSHISICVHCGRGFRSASSLDSHISNAHTGMCKCSICGTKCKNAQTLASHMARYHYGKDFKCSQCPELFETVYKKQKHLIEVHNIGHKCSHCGSSFTTYSRMVNHVKRKHLKERTVPCSICDLKFFDQQQMKLHMVKHEGERRFRCDICHKAFLWKKNLKSHMKSHIMVKHTKSHGLCTDRILKDSVIWIDVSEISCEICETEFESLELILDHLTNDHLKIYHRNIETSFLQYRLRDLKCVVCVKYFKDFKYLVQHTKDEHANTKCPKTCDFCLNTFVSSNELTVHSSNCDLKIKEPTKGEKMALFQRIRKNIQCVINMSTAVPFKFKAKFKCFYCTQLFIDCEAVITHTRAEHPFCDLKLRALKECKSDKPRVKIDINHLACKLCQQPMADLTTFVDHAIEKHEAKYDKSIPITACFEQFRLIQRGIPCLDCGKTFTYFATLLRHIGAEHSDRSICVYCGRGFRSATSLDMHISNMHTGMCDCSICGTKCKNSQTLGRHMARYHDVKDYKCSQCPELFESVYKKQKHLIEVHNIGHKCSYCGSMFTKNSFMENHVRRTHLKERTVPCSICNLKFFDQRQMKLHMVKHDGERRFRCDICHKAFLWKKNLRSHMNTHNRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -