Hchr025613.1
Basic Information
- Insect
- Hemistola chrysoprasaria
- Gene Symbol
- ZFY
- Assembly
- GCA_947063395.1
- Location
- OX346736.1:2189359-2198347[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 36 0.0054 0.44 11.8 0.5 1 21 151 171 151 172 0.95 2 36 8.2e-05 0.0066 17.5 0.0 1 23 232 254 232 254 0.98 3 36 0.054 4.3 8.7 1.4 2 21 258 277 258 278 0.93 4 36 0.0066 0.53 11.5 0.6 2 23 314 336 313 336 0.95 5 36 8.6 6.9e+02 1.7 1.1 3 23 344 363 343 363 0.83 6 36 0.0049 0.4 11.9 0.7 1 23 368 390 368 390 0.98 7 36 0.026 2.1 9.7 0.5 1 23 396 419 396 419 0.96 8 36 0.2 16 6.9 5.5 1 23 428 451 428 451 0.97 9 36 0.02 1.6 10.0 5.4 1 23 459 481 459 481 0.98 10 36 0.0082 0.66 11.2 0.9 2 20 596 614 595 616 0.95 11 36 0.0057 0.46 11.7 1.3 1 20 646 665 646 668 0.94 12 36 0.0029 0.23 12.7 0.5 1 23 673 696 673 696 0.94 13 36 8.3 6.7e+02 1.8 2.5 5 21 702 718 701 719 0.92 14 36 0.08 6.4 8.1 1.1 1 23 726 749 726 749 0.82 15 36 0.00015 0.012 16.7 2.1 1 23 755 777 755 777 0.95 16 36 7.9e-05 0.0064 17.6 1.7 1 23 784 807 784 807 0.98 17 36 0.00068 0.055 14.6 3.3 2 21 906 925 905 926 0.94 18 36 0.11 8.6 7.7 0.4 3 23 932 952 931 952 0.91 19 36 10 8e+02 1.5 0.1 2 22 958 978 957 980 0.87 20 36 0.067 5.4 8.4 0.7 1 23 985 1007 985 1007 0.93 21 36 2.4 1.9e+02 3.5 1.0 5 21 1013 1029 1011 1030 0.92 22 36 0.0031 0.25 12.6 0.2 1 23 1043 1066 1043 1066 0.95 23 36 0.00019 0.015 16.4 3.3 1 23 1072 1094 1072 1094 0.98 24 36 8.4e-05 0.0067 17.5 0.3 3 23 1103 1123 1101 1123 0.97 25 36 0.64 51 5.3 1.7 1 23 1129 1152 1129 1152 0.89 26 36 1.8 1.4e+02 3.9 0.2 1 13 1160 1172 1160 1174 0.87 27 36 0.00065 0.052 14.7 0.1 2 21 1273 1292 1272 1293 0.94 28 36 7.8 6.3e+02 1.9 0.0 2 23 1299 1321 1298 1321 0.90 29 36 0.013 1 10.6 0.2 3 23 1328 1349 1327 1349 0.97 30 36 0.00012 0.0097 17.0 4.8 1 23 1354 1376 1354 1376 0.97 31 36 0.088 7.1 8.0 2.9 2 21 1380 1399 1379 1400 0.93 32 36 3.4e-05 0.0028 18.7 0.6 1 23 1426 1449 1426 1449 0.95 33 36 0.003 0.24 12.6 1.0 1 23 1455 1477 1455 1477 0.95 34 36 0.16 13 7.2 0.1 1 23 1483 1505 1483 1505 0.97 35 36 0.0096 0.77 11.0 0.6 1 23 1511 1534 1511 1534 0.94 36 36 0.046 3.7 8.9 0.3 3 23 1542 1565 1540 1565 0.85
Sequence Information
- Coding Sequence
- ATGAGCCGGCAAGTAGACGTGAAAGCTCTCGTGTCGCACATCGTCAGAGGAGACGGCTTGGACAAATGCCGAATATGTATGGGCGACACCTCACAAGGGCAAGTCCACCTCGGAGACACGGTCATGATGGATGGGGACAAGGCCGTCACACTTTCTGAGCTTTTGGAAGTCATAACGGGAGTCGAGATGACGTCAGAGGAAGGCCTCCCCCCAACTATATGCGTACCATGCACCGACTCACTCACAGAAGCCGCTGCTTTCCGAACCTTAGTTCAAAATGCCCAGGAAACTTGGACCAACATGCTTGAACTGATAGATTTAATACCCAACACAATCAATAAAACTACAGACCGAGTTTTGGCTAACATAGTAAAGAACAAAATCTACATCACTGAAATAGCAAAGGAAGTCACCAAAACCGAAACCAAAGTTAAACTTACAAAGGGATCGTATCGATGTCCGAGATGCAAAATGGAGTTTTCGTATCCAAGACTTTTGTATACGCATTTGAATCAATCTGCAGATTTGATACGAGCTTGTCCAGTTTGTGCTCAAATCATGAGCAGAGGTGAATTAGTCAACCATATGTATGAGCATGATAAAAAGCTGTATAGCTGCAAGAAATGTCCAGCTTTATTCTTATATGTTAAGCCGTATAGGGATCATATTATGACAGCGCACAAGCCAGGCGCTTTCACGTGTGGAGATTGTGGACGAAGTGTGTCGTCTGAGGCAGCATTAAATGCTCACCAGTCCATCCATTCGCAACGATCTTGCCCAAATTGTGACACTCAATTCAACAACCAGACTTGCTACATATACCATATACAAAAATGCTGTAGGTTAGAACCAGCAGAAAACACGAATAAAGTTGTGGCAACACTTAATGATAAAAGAAAAGTGAAAATAGGAGCTAGAGGCAGTCGTAACAAGGAATGCATTTGTGATTATTGCAAGAAGACTTTCGCTGGGAAGAAGTTTGTAGCCGCTCATATACAAATAGTACATACAAAAGAAACACACCGACCGTGTGTTCATTGTGGGAAATTATTTGCCGCTGCGCACATGCCAACCCACATGAAAAGTCACGAAAACTTGACATTCGAATGCAACCAATGCGGTATCAAAGTCAAATCTAAGTTAGGTTATCGCCAACATTTGCGTTTGCATACCGGTGAAAAACCGTATCCTTGCCAATTTTGCGGAGAAAGATTCTCAGCTTCTTCGAGACGATCTGAACATATAAGAAACATGCATACAAAATCTGAGATAGTTTTAAAACATAGCTGTAGTTTATGCTCAGCTCAATTTCGTCTTCCGCATAAATTGAGACATCATGTTAAGACAGTGCATGGCCAAGCTAATGATTCGTTTTATGAATGCAAGAAATGTAAAGAGAGATTTGCCAGTTGTCGTAGTCTTTTGTATCACAATAGGAAACATAATAAAACTATGGAATCCACGCCATTCCTGCCGAATCAAACATGCGAGACCTGCTCCTCATCCATCATAGACTTTCTACCTTTCTTCAAATTATGCCGAAAATCCGCAGAACACTGGAACGAGATCGCTGATCACTTGAACACCATCACCGTTCATAGGAAATCTACCACAGCGTATGTCCTAATCGGCAAAGAACTTAAAACTGTAGGCGACAGAAGCGCTCGAAACAAAACTCcgaaagaaattttaaaaaatatgagaTACAGACTGAATCACGTACGGTACGATGAAAAGTGCAAGAAGAAACCCAAAATTAAAGAAAAGCCGAAAGAAGTTATTATGACATGTCCTAAATGCAATAAAAACTACACAGACTTTCACAAATTCAACGCACATATTGGCAATATAAGAATGGTTTGTTGCGAACACTGTAATGGTATTCTAGACGACGTCTCTTATGGTGATCATCTTAAAACTCATAAGATAAATAGTTTTCAATGCAAAATTTGTTCCCTCCACTTTGTAAATAAAGAAGGTTTGTTAAAACACAAGTGGGTGCATCAAAACGGGAAGTTCATGTGTCCGGAATGCAAAGTTACGTTTCCTACTATGGAAAGATTGACTCAACATATCAACTTCAAACATAcaacaatttattgtaaatgcaAAGAGATTTTTACTAGTAAGTCTTGCTATTCGACACATAAGAAGCTTTGTAGTCAAAAGCAGAAGTATATTTGTGATTACTGCTCGAAGGAGTTTAAGAATAAGACAGTAATTTCAGGGCATATCACGTATTTCCATCAACAAGAAAAATTGCACCAGTGTGACAAATGTGGAAAGAGATTTGCTAATTCGAATTCTTTAGAAGAACATAGCTACTCGCACGAGAAAATACTAGATCGATTTTCATGTGAATTTTGTGGTCTAAACTACAGCACGAATGGTGGTTACAGGAGGCATATGAGAAAGAAACATTATAATGTTGAGGAGGTACCAGAACTGCCGCCAGCGCTCTGCTGCTCTTGCTCCGAAGTTGTAATACAAACAGCAGAGTTCAAGCATTTGTGCAAAGAATCTGCACAACGTTGGGAAGACGCATCAAACTTACTTACCGCCATCCCTGACGCGACTGAGAGAGACAGAACGTATATCGTATtccatgaaaaaaaaattattagcaCCCTATCTACAACAGTCAGCTCGATAGCACGAGCTGCGTTGCTCCTAAACAAATCAAAGGACAAAAAGAAAAAACGGTTCTTCTTATGCACATGCCCACATTGCGGCAAACCTTTTCACACATTAGAAACTTTAAACCAACATCTGAAGTATACTCCAAAGAGTTTCTGTCGCGAATGCGGGGTCATTTTCAATAAGAAAGATTTGGCTAAACATCTTATTGATAAACACGGTATTATCGTTATTTCTTGTGAGAGCTGCTACCGACTATTTTCTAATATAGATGATGCTAAAGATCATATTGTGGATAACCATGGACCGACGTTTCACAACTGTCAGGTTTGCGGTATGGGATTCTCGAATGAACGAGGGATACGTGCGCATTTCTCGAATCACGCTCTATACTCGTGCTACTGTGGCAAGATCTACGAAAACAACAGATGCTACAAATACCACATCACAAAATGCAAAGCTAAAAAGCCCAAATCTACCAACTCGATCTATGAATGCGATTATTGCGGAGTTCAGTACGACATGAAACCATCTTTAAAAGCGCATATAAGTCAAAAACATCTCAATGTACTACCGTTTGTCTGTCATGCGTGCGGAAAACGAACTTCTACGTTAGCCCACTTGAGGTCTCACCAACTAACTCACAAGAAGGAAAGAAAAACCATCGATTGTGAGTACTGTGGGGCAAAGTTTCGTACAAAAATTGGTTATAAGCTACATATGAGAATTCACACCGGTGACAGGCCGTATAAATGTGAATTTTGCGACGAGAGCTTTCTCTCGTCGTCTCGTAGATCAGATCACGTTAAAAGACGACATAAGGCAGTAAAAGAAACACCACATGTCTGCAAAAAGTGTCCAGCCTCATTCATACGAGAAGAAAGCTGTTGCCCTCCAGGAGCATGTGTGACTTGTGCAAGCGCCGCCCTAGCCGCACAGGAATTCCGCCTATTCGTCAAAAACTCTGACAAACTTTGGTTGAAAGCTATATCGAATCTAACAGATTTAGAATGCGACGAAACCGACCCAGTGAAATCTATTTGCGCATATGTAGAACAAAACGATTTAACTATTCATACAACAAAGGATTATACCGGTGGTGAGGCGAAAATTGTAGTTAATCGTTCCAAAAGTAAAAAGACCAGAAGAAAGAACAGATTCACTCGCGGTCCAATGATCACGTGCCCCGATTGCCTAAAAGCATTCACAAGTCCTTACTTCCTTCAAATACATCTGAAAAATAGTGGACAAAAGGATGTTTGTTTAATCTGTGGTCTCACGACAGTCAGAGGTATGCCTATGAAAGACCACATAGCGAAAGTGCACAAAGAAAATGCTGCGTTATGCTCGCAATGTCCAGCTTTATTCATGCAGCAAAGCGATTTAGAAAAACACGTGCAAAAAGCTCACGTTCCTGGAGCTCACACTTGTACAGATTGCGGCAGGACGTTCCCGAGATTGTCTTCCTTCGAACATCATTTCCAAATGCATGTCGTGAGCACGTGTCGTAATTGTGGCGTCCAGTTTACAAATAGAAGTTGTTATAGAGAACACAGGAATCGATGCGAGCCAGACGCCAAACCCGACGCCAAAACTATGCCCAGAAACCGCCGATCGAACATTCGAGACCCGGCTGTCTTCATATGCGATTATTGCAAcaaaaaatacacaagccgACCTCAATTGAAAAATCATATCCTCTGGATTCACATGGATATTCGACCTCATCAGTGTCAGTGGTGCGGAAAAAGGTTTTATACGTATGCGAGACTGGCCGAACACACAGTGGTGCATACTCGCGCGCGGAATTTCGAATGTGATATTTGTGGCGCGAAATTGGtttccaagatggcggccgtgtaCCACAGACGTCGTCACACTGGCGAGAAACCCTATAAATGCGAGGATTGTGACGCCTCATTCATATCTTCATCTCGCAGACTGGAACATGCGAAAAGGAAGCATAATAGAGGGGTGAAACTTCAATGCCCGCATGCCCCCTGTTCTGCGGCGTTTGTACGCAAAACTGAGCTTAAAAAACATTTGATTAGGGCGCATAATACAACTGACATTATTAATAAAGGGCTTAATTCAACGCAAACCGTGAATAAAGCGCTTGATGCTGATTTGGCTAGTATTAAAAAGAACGACATAAATGCTAAAGATAAAGACCGTCGCGAATTAACACCAACTTGCGATGTTAATTACCAAGTCATATGGGAGGAAATGTAA
- Protein Sequence
- MSRQVDVKALVSHIVRGDGLDKCRICMGDTSQGQVHLGDTVMMDGDKAVTLSELLEVITGVEMTSEEGLPPTICVPCTDSLTEAAAFRTLVQNAQETWTNMLELIDLIPNTINKTTDRVLANIVKNKIYITEIAKEVTKTETKVKLTKGSYRCPRCKMEFSYPRLLYTHLNQSADLIRACPVCAQIMSRGELVNHMYEHDKKLYSCKKCPALFLYVKPYRDHIMTAHKPGAFTCGDCGRSVSSEAALNAHQSIHSQRSCPNCDTQFNNQTCYIYHIQKCCRLEPAENTNKVVATLNDKRKVKIGARGSRNKECICDYCKKTFAGKKFVAAHIQIVHTKETHRPCVHCGKLFAAAHMPTHMKSHENLTFECNQCGIKVKSKLGYRQHLRLHTGEKPYPCQFCGERFSASSRRSEHIRNMHTKSEIVLKHSCSLCSAQFRLPHKLRHHVKTVHGQANDSFYECKKCKERFASCRSLLYHNRKHNKTMESTPFLPNQTCETCSSSIIDFLPFFKLCRKSAEHWNEIADHLNTITVHRKSTTAYVLIGKELKTVGDRSARNKTPKEILKNMRYRLNHVRYDEKCKKKPKIKEKPKEVIMTCPKCNKNYTDFHKFNAHIGNIRMVCCEHCNGILDDVSYGDHLKTHKINSFQCKICSLHFVNKEGLLKHKWVHQNGKFMCPECKVTFPTMERLTQHINFKHTTIYCKCKEIFTSKSCYSTHKKLCSQKQKYICDYCSKEFKNKTVISGHITYFHQQEKLHQCDKCGKRFANSNSLEEHSYSHEKILDRFSCEFCGLNYSTNGGYRRHMRKKHYNVEEVPELPPALCCSCSEVVIQTAEFKHLCKESAQRWEDASNLLTAIPDATERDRTYIVFHEKKIISTLSTTVSSIARAALLLNKSKDKKKKRFFLCTCPHCGKPFHTLETLNQHLKYTPKSFCRECGVIFNKKDLAKHLIDKHGIIVISCESCYRLFSNIDDAKDHIVDNHGPTFHNCQVCGMGFSNERGIRAHFSNHALYSCYCGKIYENNRCYKYHITKCKAKKPKSTNSIYECDYCGVQYDMKPSLKAHISQKHLNVLPFVCHACGKRTSTLAHLRSHQLTHKKERKTIDCEYCGAKFRTKIGYKLHMRIHTGDRPYKCEFCDESFLSSSRRSDHVKRRHKAVKETPHVCKKCPASFIREESCCPPGACVTCASAALAAQEFRLFVKNSDKLWLKAISNLTDLECDETDPVKSICAYVEQNDLTIHTTKDYTGGEAKIVVNRSKSKKTRRKNRFTRGPMITCPDCLKAFTSPYFLQIHLKNSGQKDVCLICGLTTVRGMPMKDHIAKVHKENAALCSQCPALFMQQSDLEKHVQKAHVPGAHTCTDCGRTFPRLSSFEHHFQMHVVSTCRNCGVQFTNRSCYREHRNRCEPDAKPDAKTMPRNRRSNIRDPAVFICDYCNKKYTSRPQLKNHILWIHMDIRPHQCQWCGKRFYTYARLAEHTVVHTRARNFECDICGAKLVSKMAAVYHRRRHTGEKPYKCEDCDASFISSSRRLEHAKRKHNRGVKLQCPHAPCSAAFVRKTELKKHLIRAHNTTDIINKGLNSTQTVNKALDADLASIKKNDINAKDKDRRELTPTCDVNYQVIWEEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -