Basic Information

Gene Symbol
ZFX
Assembly
GCA_947063395.1
Location
OX346728.1:500894-504623[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.011 0.9 10.8 0.3 3 23 83 103 82 103 0.99
2 24 0.13 10 7.5 0.6 6 23 115 133 115 133 0.98
3 24 6.3e-05 0.0051 17.9 1.4 2 23 187 208 187 208 0.97
4 24 3.4e-06 0.00028 21.9 0.7 1 23 214 237 214 237 0.95
5 24 3.3 2.6e+02 3.1 0.1 3 23 245 265 243 265 0.83
6 24 7e-06 0.00056 20.9 0.7 1 23 271 293 271 293 0.98
7 24 0.45 36 5.8 1.6 1 13 299 311 299 313 0.89
8 24 0.023 1.9 9.8 1.0 1 23 415 437 415 437 0.98
9 24 0.00067 0.054 14.6 2.2 2 23 444 466 443 466 0.92
10 24 8.1e-06 0.00065 20.7 0.5 3 23 474 494 473 494 0.97
11 24 1.5e-06 0.00012 23.0 1.1 1 23 500 522 500 522 0.99
12 24 0.00075 0.06 14.5 0.7 1 23 528 550 528 550 0.97
13 24 0.053 4.3 8.7 0.7 6 23 560 577 559 577 0.94
14 24 0.067 5.4 8.4 0.2 1 22 583 604 583 604 0.92
15 24 0.0019 0.16 13.2 0.0 1 23 659 682 659 682 0.94
16 24 0.0014 0.11 13.7 0.3 1 23 688 710 688 710 0.94
17 24 0.0093 0.75 11.1 0.1 1 23 716 738 716 738 0.95
18 24 0.0023 0.19 13.0 0.1 1 23 743 765 743 765 0.95
19 24 0.00095 0.077 14.2 0.4 3 23 973 993 972 993 0.98
20 24 8.4e-06 0.00068 20.6 0.6 2 23 999 1020 998 1020 0.95
21 24 0.0059 0.47 11.7 1.9 1 23 1026 1048 1026 1048 0.98
22 24 0.035 2.8 9.3 0.2 1 23 1054 1076 1054 1076 0.96
23 24 0.00017 0.014 16.5 0.5 1 23 1082 1104 1082 1104 0.96
24 24 0.001 0.082 14.1 1.8 1 23 1109 1132 1109 1132 0.94

Sequence Information

Coding Sequence
ATGGAGGAGTACAGTTCCCAAGTGCAAGTGGTGTGCCACGCTTGTGACTCCACATGTTACACCGGCGAGGACTTCGTCGACCACGTCACTAGTGTTCACACTGACCTTATACATGAACACGATATCGCTGCGTTTGTGAAGGACAATGCAACGTTTGAACAAGTGTTACAGTCAGATTCGGATGGTGAAGCTCGTTCGGTTACGTCGGAACCTCTCGAGGAACGGAAGCCCCTGCCCACGTTACTCTGTCCATACTGCGAAAGCTCGTTCTCTGCGACCTCTCGGCTGATCAGTCACTTGAACACTCACAAGGAGATATCGATGGAACTCGGTGTAGAATGTTGCGACACGTCATACACGAACAAGAGAGAGTTCGTGAGCCATCTGCAACGAACACATATCAACCGTCTCGTGTACGACACCGCTACCATGTGCAAGAGCTGCGGACACAACGCCGAGACAGAGGAGCTGCTGGGCGCTCATGTCGCCGAGAAACACAAACAACCCGAACGGAAGCCGGTAAAAGAGAGTCCGAGGAATCAAAAGTGCATACCGGCCGTCTGTCCCGAGTGTAACAAGACATTCTCGAACAAGTACAACATGCTGTTCCACATGAAGTCTCACAAGGAGAGCGAGGCGCACGTGTGCGACACGTGCGGCAAGAGTTACACGACGCGCGGCAACCTGGCGCAGCATCGCCGAGCCGCGCACCTCGGCCTCATGCGGCATCTCTGTCGGCAGTGCGGCGAGGCCTTCCCCAGCGGCGGCGCGCGGGACGTCCACGCGCGCCTCCACACCGGCGCGGCGCCCTACGCGTGTCCGCTCTGCGACAAGAGCTTCCGCGCCACCAACACGCTCCGCAACCACATGAAGATGCACTACGACGTGCGAGACTACGAGTGCGACCTCTGCGGGAGGGGCTTCAGGAAGCGAGACTGCGATAGATACGCCCTCCGCGAGGAGGAGGCCGCGACACGAGACTCGGACGACTCGGAGGACCTGCCGCTGGCCGAGCTCGCGCGACACCCGCCGCTGCACGGGTTCCTCGCCGCGCTCGAGGCGCTCAGGGATCACATCGCCGGCGAGCACGCGCCCCccgccccgcccccgcccccgctcGCCGCCGCCGACGCCGACACGTACGACGACCTGTCCCTCGGGAACATGCGGCGCGACCGACTGGACGAGGAGACGCGCGCGAGACTCGCCGCCGCGCGACTCACCGTCGACGGCAAGACGCGGTACTCGTGCGACACCTGCGGCAAGCTGCTCACCTCCGCGCACACGTACATCTACCACGGACGCATCCACACCGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCAACGGCCTCCGCCGACACCTCACGGAGACGCACGCGCGCGCCCGACGCCCCGCCTGCGCCCGCTGCGGACGGAGCTTCGCCAACACGCAGAACCTCAAGCAGCACATGCGCATCCACACCGGCGAGCGGCCCTTCCGGTGCGGCCAATGCGGGAAGACGTTCGCGCAGAGCGGGTCGCTGCACGCGCACGTCAAGACGCACTCGGCGCAGATACCGCACCGGTGCGGCGAGTGCGGCGCGAAATTCCGCCTGCGCGCGGGGCTCGCGCGACACCGCCTGCGACACTCTGGCGAGCGCGCGCACGCGTGCGCCTGCGGCCGAGCCTTCGCGCACCGACACGAGCTCGCGCGACACTCGCTCGCGCACCTCCCCGCGCGCCCCCACGCCTGCGCCCTCTGCCCCGCCGCCTTCCGCGAGCGCCGCGCCCTGCGCCACCACGCGCGCCGCGGCGAGTTCAAGCTCGAGCgggaggaggaggaggaggTGGAGCGGCCGGTGGAGGTGGTGGAGCACGAGGGGCGGCGGGTGGCGCGGTGCGGGCGGTGCGGGCGCGGcgtggcggcggcggcgtgggCGCGCCACGCGCGCTCgcaccgcgccgcgcgcccgcaCACGTGCGCCGCGTGCGCGCGAGCCTTCTCCGACGCCGGCAACCTGGCGCGGCACGTGCGCGCCGTGCACGCGGGCCGCAGGCCGCACGCGTGCGCCGCGTGCCCGGCGACCTTCACCCGCGCGGCGCACCTGGCCGAGCACGCGCGCACGCACGGGACGGCGCGCCCCTTCCTGTGCGAGACGTGCGGCGCGGCGTGCGGCACGGCGGCGGCGCTGCGCTCGCACGCGCGCCGGCACGCGGCGGCCACGCACGCGTGCCCGCGGTGCGCGGCCGTGTTCCGGCGGCGCGGGGAGCTGCGCGCGCACGCCTCCGTGCACGCGGGCGCGCGGCCGCACGCGTGCCCCGAGTGCCCCGCCTCGTCGCCCCGGCACGCGCGCGCCCCGCGGTGTTTCTCTCGCTCGAACGCCGACACCCGTTCGCGACGTCCGACGATCCTCGAGGAACGGGACGAAGAAGACAGAATTGATTTAAAAGCTCCCTCGGACAGCTCGATCGAGGACGTCCACGATGTCGTTCCGGTCGCTCTCGCACGGAACTCTCCGCCGCGAGCCGCGACCGACTCGGAGTCGACCCCTCCTCCCGCCGAGGACGCTCCGCCGGGTCGGGGACCCGAACCGTCGCCCCCCGATATAAAATGGAAGCCCTCGACACCCGAGACCGTCGCTCCTAGTACGGACGATTTTAGAAACGATACGAACGGCCCCGACCATAAAACGCCGACCGAGAAAGTACCCGGGGAGGCGGACCGGAACAAAACACCATGTGACTCCCCAGACCGACCGAACGAGTTTTCGGACCACAGCGACGTCGAGAACGAATTCGAACCGCTGCCGAATTCCGTGTTCGAGGCCATAGAGGACACCCAGGATGTCCCCGGACCGACTTCACCGGATAAAAATACGAAGCATTCGGGTGCCCATGGCAAACCGCCCCGCATCTGTCCAGTGTGCAACAGGAGCTACTCCGCTTCGTCGAGCTACTACTACCATCTGAAGACGCACTCGAACGACGACTGCGAGTGTGACGTCTGCGGGAAGAAGTTCAAAACGAAAAGTGCCCTCGCGGTGCACGGCGCCACCCACGGGGAGCGGCGGTCGTTCTCTTGTAGGAAGTGCGAGAAGAAGTTCAGTTCGTCGGCGGGACGGTACATCCACGAGCGCACGCACACGGACCGGAAGCAGTTCGCCTGCGTACAGTGCAACGCGGCGTTCAGGTGGCGCGCACAACTCAACCGTCACTATGCCCGGCACGGGTCCGCGCGGCCCCACGCGTGCGCACAGTGCGCGCGCGCGTTCGTGACGCGCGCGGACCTGCGCCGACACGCGCGCACGCACCGCCCCGGCGCGCACGCGTGCCGCCTGTGCGGGACTCGCTTCGCTCAGGAGAGATACCTTAAGGTTCACATGGATAAGAAACATTATGAAGATGGAGCGAACAAACCGGACGTGAAAACTATGTATCTGGTCAAAAATGTGTCTCGAAGTGGTGAAGTGATTGTGTTGAATGATCTTTGA
Protein Sequence
MEEYSSQVQVVCHACDSTCYTGEDFVDHVTSVHTDLIHEHDIAAFVKDNATFEQVLQSDSDGEARSVTSEPLEERKPLPTLLCPYCESSFSATSRLISHLNTHKEISMELGVECCDTSYTNKREFVSHLQRTHINRLVYDTATMCKSCGHNAETEELLGAHVAEKHKQPERKPVKESPRNQKCIPAVCPECNKTFSNKYNMLFHMKSHKESEAHVCDTCGKSYTTRGNLAQHRRAAHLGLMRHLCRQCGEAFPSGGARDVHARLHTGAAPYACPLCDKSFRATNTLRNHMKMHYDVRDYECDLCGRGFRKRDCDRYALREEEAATRDSDDSEDLPLAELARHPPLHGFLAALEALRDHIAGEHAPPAPPPPPLAAADADTYDDLSLGNMRRDRLDEETRARLAAARLTVDGKTRYSCDTCGKLLTSAHTYIYHGRIHTGERPCVCHVCGKQFRAPNGLRRHLTETHARARRPACARCGRSFANTQNLKQHMRIHTGERPFRCGQCGKTFAQSGSLHAHVKTHSAQIPHRCGECGAKFRLRAGLARHRLRHSGERAHACACGRAFAHRHELARHSLAHLPARPHACALCPAAFRERRALRHHARRGEFKLEREEEEEVERPVEVVEHEGRRVARCGRCGRGVAAAAWARHARSHRAARPHTCAACARAFSDAGNLARHVRAVHAGRRPHACAACPATFTRAAHLAEHARTHGTARPFLCETCGAACGTAAALRSHARRHAAATHACPRCAAVFRRRGELRAHASVHAGARPHACPECPASSPRHARAPRCFSRSNADTRSRRPTILEERDEEDRIDLKAPSDSSIEDVHDVVPVALARNSPPRAATDSESTPPPAEDAPPGRGPEPSPPDIKWKPSTPETVAPSTDDFRNDTNGPDHKTPTEKVPGEADRNKTPCDSPDRPNEFSDHSDVENEFEPLPNSVFEAIEDTQDVPGPTSPDKNTKHSGAHGKPPRICPVCNRSYSASSSYYYHLKTHSNDDCECDVCGKKFKTKSALAVHGATHGERRSFSCRKCEKKFSSSAGRYIHERTHTDRKQFACVQCNAAFRWRAQLNRHYARHGSARPHACAQCARAFVTRADLRRHARTHRPGAHACRLCGTRFAQERYLKVHMDKKHYEDGANKPDVKTMYLVKNVSRSGEVIVLNDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-