Hchr026310.1
Basic Information
- Insect
- Hemistola chrysoprasaria
- Gene Symbol
- clz9
- Assembly
- GCA_947063395.1
- Location
- OX346736.1:7409758-7412034[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-07 0.00018 21.8 0.0 2 44 19 61 18 62 0.85
Sequence Information
- Coding Sequence
- ATGCCGCGGGATTATATAAGAAAGCCAGGAACCAGAGCGTATAAAAATTATACAGACGAAACTCTTCAAGCTATATTAGCAGAGATTAAATCGGGACGTATTTCAGTTCGTGGCGCAGCCGAGAAGTATGGGATTCACCGCAATACGTTATCTTCTAAACTGAAAGGCAAAGCGCCTTTAAAACATGGAGGACAACCTGTATTCAGTGAAACAGAAGAACAAGGGTTTATTTCCCACATTGTTGCACTATCTTCGTTCGGATTCCCGATCACACCAACGGAATTACGTGTGATTGCAAAAACGTATTTAGACAAGCAGGGTAGAAAAGTTAACACTTTCAAAAACAATTATCCGGGAAAAGAATGGGCCCACTCCTTTTTGAAACGCCATAAATCTCTTCTTTCTCATAGAATGGCAAGGAATATTACTCATGGCCGAGCAGAGGTAAACGAAACTATTGTCAACGAATTTTTCGACAATTTCGAAAAAGAGACTGAAGGCGTACCAGATACAAATATCTGGAACTACGACGAAACCTGCCTTGTGGACGACCCTGGCTCAGTAAAGGTTTTGGTGAGGCGTGGGACCAAATATCCTGAGATTATACGAAACTCATCGAAAGCGTCGACATCAATAATGATATGTGGTAGTGCAGCAGGAGAACTGGCACCTGTCTACGTTGTTTATAAAGCCGAAAACATGTGGGAGACTTGGACTGAGAACGGGCCCGAAGGAGCTCGTTACAACCGTACCAAATCGGGCTGGTTCGACGCTCGGTGCTTCGAAGATTGGTTTCATTTTACGATGTTACCAATTTTAAAGAAACAAAGCGGCAAAAAGGTATTAGTGGGTGACAATCTCAGCTCTCATATTAATCGGGAAGTCATGGCTGATTGCGAAGCAAATAACATTGCATTTATTTGCCTTCCTCCGAATGCAACCCACTTACTGCAACCTCTAGATGTTGCATATTTTCGTCCTATGAAAATTGCGTGGAGAAACACGCTAAATGAATGGAAGAATAATGTCCGCGGTAGTAGGAGCTCATCTGTGCCTAAAGATCATTTCCCCGGGCTTTTAAAGGAAATGTTTCAAAAGATGGAAACAAATTCTTCTCAAAATCTTAAATCCGGATTTAAAAAGTGTGGTTTGTTTCCGCATAGTAGAGATGAAGTTTTACGAAGATTGCCGGATAGACAACTAGAAGAAAATGTACCTGTCCAGGAATTGTTAGGTGAGAGTTTCATAGAAAATTTGAAAGCTACAAGGCTGCAAGTCACCGAAACACGACAGTGCCGAAGAAGGAAGCGGGTCAATGTTCCACCAGGACGAGGCATAACTACTGCAGATTTACAACACGATATGGAAGTTCAGCTTGCGCCATCAACTCCTCTTTTTGATGAAGGATCAGATGCCGAGTGTGACGCTAACTCAGAGCTAGCGGTGGAGAGAGCTGCTCGTAGTAACTGCTCAACTCCAGTGCAACCATACTCACATGAATCTCCTTTTCTCTCATGTAGTACTCATGAAGCCTCTCCAATTCCATGCAGTAGTTATGCCGTCAGTAGCAATACTACTATGCCTCTTCATGACCCAACCTCAGAACAAGCGATGGAGAAAGCTGCTTGTAGTGACTGTTCAACTCCGACACACATTTCTACCTCACCAACTCCTCATTGCAGTAGGTATGCCCTCAATGAGATAACTGAACCCCGGAGCGCCAAAGAATCAGAGATTGATAGGAAGCCTCAACCTTACACGTCTAAAACATCAGAAAGGCAACAGAAAAGTAGTTTCAGCGCATCAACTgccattttaaataataagcgAAAGAAATCAATAAAAAAGGTACCCAAATCTTgcttaaagaaagaaaaatacaatCAAGATTCAGACGATAGCTGTGATTCATATATGTCCCTTCAGGAAAGCGACGCCAGTTTGAATTGGTATGATTTAGAAGATTTAGAAGATTCAGAAAAAGAAAATGACAATAACACAAGTACAGAGATACAATtcgaagaaaataaaatggatCTTACGAAATTAAAGGAAGGAGATTATGTTCAAGTCGAATACGAGAATAACTTATACCCTGGAAAAGTAATTAGAATATTAAATGACTCGGCGCTCATCTCTGCTATGGCAAAATCGGGATATAATACGTGGAAATGGCCCAAACCCGCAGACATCATTTGGTATCATCATTCCAAAATAAGACAAGTCATCAAGGAACCAAAATCTATTTCTAAGAGGGGTCTTTTTAAATTTTCCTAG
- Protein Sequence
- MPRDYIRKPGTRAYKNYTDETLQAILAEIKSGRISVRGAAEKYGIHRNTLSSKLKGKAPLKHGGQPVFSETEEQGFISHIVALSSFGFPITPTELRVIAKTYLDKQGRKVNTFKNNYPGKEWAHSFLKRHKSLLSHRMARNITHGRAEVNETIVNEFFDNFEKETEGVPDTNIWNYDETCLVDDPGSVKVLVRRGTKYPEIIRNSSKASTSIMICGSAAGELAPVYVVYKAENMWETWTENGPEGARYNRTKSGWFDARCFEDWFHFTMLPILKKQSGKKVLVGDNLSSHINREVMADCEANNIAFICLPPNATHLLQPLDVAYFRPMKIAWRNTLNEWKNNVRGSRSSSVPKDHFPGLLKEMFQKMETNSSQNLKSGFKKCGLFPHSRDEVLRRLPDRQLEENVPVQELLGESFIENLKATRLQVTETRQCRRRKRVNVPPGRGITTADLQHDMEVQLAPSTPLFDEGSDAECDANSELAVERAARSNCSTPVQPYSHESPFLSCSTHEASPIPCSSYAVSSNTTMPLHDPTSEQAMEKAACSDCSTPTHISTSPTPHCSRYALNEITEPRSAKESEIDRKPQPYTSKTSERQQKSSFSASTAILNNKRKKSIKKVPKSCLKKEKYNQDSDDSCDSYMSLQESDASLNWYDLEDLEDSEKENDNNTSTEIQFEENKMDLTKLKEGDYVQVEYENNLYPGKVIRILNDSALISAMAKSGYNTWKWPKPADIIWYHHSKIRQVIKEPKSISKRGLFKFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00790209;
- 90% Identity
- iTF_01335877;
- 80% Identity
- iTF_00790209;