Basic Information

Insect: Hemistola chrysoprasaria
Gene Symbol: GCR2
Assembly: GCA_947063395.1
Location: OX346713.1:8931853-8937406[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.6e-10 1.7e-07 31.5 0.0 3 38 15 51 13 57 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.6e-10	1.7e-07	31.5	0.0	3	38	15	51	13	57	0.84

Sequence Information

Coding Sequence: ATGgagaaaagtaaaaaatatgttCGGTTCCAATATTCTGAAAAAGATCTGGAAGATGCTTGTCGTGATGTTGTTTCTGGTACTTTATCACTTAATAAAGCACATAAACACTATAACATTCCGAAATCCACtctacacaataaaataaatcaaaaagtACCAATGCAACGAAAATTGGGACCTTCTACACAATTAACACAAGCTGAAGAAAACGCGTTAGCGGAATGggtaataaaaaaagcaaaaagtGGTTTTCCTATGCATCCTGAAGAGTTGCAGCTAACTGTCAAAAAATTTTTAGATTCAAACGACAGGAAATCAATTTTTATCGATAATAAACCGGGGCGTAAATGGCTTCAATTATTTCTTAGCCGGCATCCCGAAATAAGTAAACGAAATGCTGAAGTCATTTCCAGGGCCCGTGCATCGGTAACAGAAACTTCTATACGTAAATGGTTTGAAGAGTTAAATAATTTCCTTAAAGAAAACGAAGCAGATGACATCATGGAGCACCCAGAGCGTATATTTAATGCCGATGAGACGGGGGTACAAATGTGTCCAAAATCAGGAGCTGTACTTGCacccaaaaattataaaaactcgtATCAAATCGCAACGGGAAAAGAAAAAGAACAAGTCACTGTCCTATGCAATGTGTCCGCTAATGGTGAGTCAGTGCCACCTATGCTCGTATATCCTTATAAAAGGATACCACGGGATATTGTCAACTCTGTCCCGGACGAATGGGGTATTGGTCGCTCAGATTCTGGGTGGATGATATCGGAAACATTTCTAGACTATGTGAAAAACGTTTTCCATCCTTGGCTTGTCCAAAAAAACATTGCATTTCCGGTCATCATGTTTCTGGATGGACATAAATCCCACATCAATAAAGAACTATTTGAATATtgtaccaaaaataaaatattgctgTTTTGCTTATTTCCAAACGCAACTCATATTCTGCAGCCTTGTGATGTTTCATTTTTTAAATCGTTAAAAAATGCGTGGAGAGATGCTGTGAGAAACTTTAAAGCCGAAAATCCAACGAAAATATTGAATCGATCTAACTTTGCAGGCGTTTTTAAAATTGCGTACAACAACAGCATCTTAAAGACAGACGTTATTTCTAATGGCTTCAGAAAATGTGGATTATATCCATTAGATCCAAACTCTGTAGATTACACAAAATGTGTAACATCACGTCAAGTTGCCGGAGAACAAGTTACAGGTAGTACGTTAGCCGATGATGTTGATGTTCAAACTGTACAACATGATAATTTGAGTACAATATCCAATTCAGATGTCCAGAGTACGATTAAAGTTATCAACTATTTGATAACTGACTCTGTCATAAAAGAATTCTATACCTCAAAAGACGAAAATAAAAGTCACATTCATCCATATTTTCCCTTATGGCTATTTTGCAAAACTTATCAGGAGAAAGAACATCAAACTGTTTTATCTGAAACTGGTTTTAGCCACGAAATGAATATAACAGGATTTGATGAAGTTTTTGACGGGATTAATTCTCCGATGAACAAAAATATAACCGGATTAGAAGTGGAAGCAATACTTAGTGATGAGAACTTGATATTTGAATTTCGTGATGACAATTTAGTAATCACCGATAATGTGCCAATGCAGAAATCAGATGCGGTAATCATAGAATCTCTTGACAAATTTTTGCTGCCTGAAAATTCTGAAAATGACTCTGATGTAACGAACGCCTCATGTCAGGATGACCTTTTAATAACTAAAGCCTTAGAAAATGATCTATCAGTGCTTAATACAGATGAGGTGATTACACAATCTCGCGATGACATTTCTGTGAACGTAATTTCTGAAAATGATGTGTCAGTGCTGAAAAACCACGTGGTTATCGATAAGTCTTGTGATGACCTGTCAGTGGCTGAAATTTCTAATAATTGTATCAACtcaacgtcattgaatgttACACAAAAAATAGATTTGACAATCATAAAAAAGGAATCTAGCGGCCTAGCGACTCGTGAAGAAGAAAGttctaaaactaataaaactaaCCAAGGTATTGAAGCGTTTTTAACAATacctaatctaaataaaacAACCCAAAAAAGAAAAACTACAATAATGCCTTATGGAATTACTTGCTCGAAAAtgaaagattattttaatgaacAAGACACAAAGAAAAGAGAGAAAGAAGAAAATGTTCAAAGAAAAAAAGCACTGAGACTagaaaaagtgttaaaaaaagaCTCAAAAGAAACTGTACTAAGGAAAAAAAAGAGGCCATCAAAGACACCAAAACTTGACATATTATCACTAGCGGACGAGGAAGCAAAAGAAAAGGAAAGGAATGAAAGCATACTTTTGAAAAACGATGACATAGATCTCAAGATCAGTACAAAACCGAGAAAAAATAGAACCATTAATGAAAATGATCTCATAATAGAAACTAAACAAACCAAAGTGGAAACTACAGAAGCGCGTGTTCACATTAATATCATAGAAATTAGAAGCTTCATAAAACCCACGCTAGACTGGCTTGTGAGCCAGCAATATGCCAGTGGGAACTTCCCATCATCACTTGGGAGCAGTTCTGGAGATAGACTGGTCCAGTGGTGTCATGGAGCACCAGGATTCGTACCACTGTTCATATTAGCTGCTCAGGTGTTTGAAGAAGAAAAGTACATGAATATAGCACTGCAATTAGGCGACGTAATATGGGATCGTGGTCTATGCACAAAAGGCTACAGCCTCTGCCACGGTGTCAGCGGCAATGCATACGTATTTTTGCAGCTCTATCAAGTTACAAAGAACCCGGAGCAGTTGTACCGAGCGTGTTGCTTCATGGAATGGTGCGCCGTGGAACGTCCCGGCACAGAGCTGCATCACCCGGACAGACTCGCCTCGCTCTTCGAAGGACTCATCGGACGATTATACTTGGCACAGGATCTCTCTTATCCACTAGACGCCAGATTTCCCgcattttgtttataa
Protein Sequence: MEKSKKYVRFQYSEKDLEDACRDVVSGTLSLNKAHKHYNIPKSTLHNKINQKVPMQRKLGPSTQLTQAEENALAEWVIKKAKSGFPMHPEELQLTVKKFLDSNDRKSIFIDNKPGRKWLQLFLSRHPEISKRNAEVISRARASVTETSIRKWFEELNNFLKENEADDIMEHPERIFNADETGVQMCPKSGAVLAPKNYKNSYQIATGKEKEQVTVLCNVSANGESVPPMLVYPYKRIPRDIVNSVPDEWGIGRSDSGWMISETFLDYVKNVFHPWLVQKNIAFPVIMFLDGHKSHINKELFEYCTKNKILLFCLFPNATHILQPCDVSFFKSLKNAWRDAVRNFKAENPTKILNRSNFAGVFKIAYNNSILKTDVISNGFRKCGLYPLDPNSVDYTKCVTSRQVAGEQVTGSTLADDVDVQTVQHDNLSTISNSDVQSTIKVINYLITDSVIKEFYTSKDENKSHIHPYFPLWLFCKTYQEKEHQTVLSETGFSHEMNITGFDEVFDGINSPMNKNITGLEVEAILSDENLIFEFRDDNLVITDNVPMQKSDAVIIESLDKFLLPENSENDSDVTNASCQDDLLITKALENDLSVLNTDEVITQSRDDISVNVISENDVSVLKNHVVIDKSCDDLSVAEISNNCINSTSLNVTQKIDLTIIKKESSGLATREEESSKTNKTNQGIEAFLTIPNLNKTTQKRKTTIMPYGITCSKMKDYFNEQDTKKREKEENVQRKKALRLEKVLKKDSKETVLRKKKRPSKTPKLDILSLADEEAKEKERNESILLKNDDIDLKISTKPRKNRTINENDLIIETKQTKVETTEARVHINIIEIRSFIKPTLDWLVSQQYASGNFPSSLGSSSGDRLVQWCHGAPGFVPLFILAAQVFEEEKYMNIALQLGDVIWDRGLCTKGYSLCHGVSGNAYVFLQLYQVTKNPEQLYRACCFMEWCAVERPGTELHHPDRLASLFEGLIGRLYLAQDLSYPLDARFPAFCL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00790183; iTF_00790184;
90% Identity: iTF_00790184;
80% Identity: iTF_00790184;