Hchr000904.1
Basic Information
- Insect
- Hemistola chrysoprasaria
- Gene Symbol
- lolal
- Assembly
- GCA_947063395.1
- Location
- OX346709.1:16183130-16195170[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.2e-16 4e-13 49.5 0.0 1 42 272 314 272 317 0.94
Sequence Information
- Coding Sequence
- atgGCTCTTTTCGTGGATAATCCGTCGAGACACCCCATAGTGATACTGAAGGATGTAACCTTCGCTGATCTCCGCACAATGGTCGATTTCATGTATTACGGCGAAGTTAATGTCACCGAAGAACAACTGCCACAGGTACTGGACACCGCAAAGTTGCTCAAAATCAAGGGTCTCACAGAGATGCCGGACTCGACGTCTCTGACTCGCGCACAAGGAGGTCCCACCGCCGAGTTCCAATCACCCGCGGAACCTAACGAACCACAGCGAGTCTCCGCCTCGCCTGCTACATCACCTTCAATTAAACGACGAAGGCGTAGGAAAAGCTCGACGGGTTCGACGTCATTGAACATGGTCGGTGAAGAGGGTCGCGATGACTCGCAGACAGTAGAACTAGTTAGAGACGGCATCACCCTCAGCTCGGTGCCTCAACGCAGGAGGGACTTCCACGACGAAAGGCATCATGACCATGCGCAACAGACATCAGAAAACCAACACAACATTAGCATGGACACACTAGGAGTGGAAAATAACCCCGCGACAATGGCACAAGGAGGACAGTGGAGTATGATGGAGCACACGTATCCGCGTTACTCGAACGCGTGCGGCGGCATCGTGCAGGCTGAGGGCGCGCTCTACATGAGCGGCGCGATGGAGGGCGACATGTCGTACGGCACGCTCGTGCAGCAGCCGTCGTGCGCACCCGACCAGCCCGCGCCCGAGCCCTCCCCCGCGCACGCGCACCCTCACCAACACCTCCACCCGCACCCGCATCCGCACCCGCAGCCCAAGCGGCGACGTACCACCAACCCGCAGTCCGAGGAGAACTTCCAACGTGCGCTCGAGGCGGTCCGCTTCGGAGGCATCGGGTTCTGCAAGGCGGCGCGCATGTTCGGCGTCAACAACCGCACGCTCTGGCTCGAGTACAAGAAGAAGGGCTACCCGAACAACCGGCCTAGCATCAAGAGTCGCATCAAGCGCGAGCACACCACGCCTCCGCCAGACCTCAAGGACGAGGCGCCGCCGCCGGACCAGCAGATGTTGCTGTGTCCCCCGCACCCCGTCTCCGTCGGTTTCATAGACTCGCGCCCGATTGATTTCCCTCTGCAGGGCATGGCGCACAACTCCCCGCTCAATATCCTCGGAGTGAACTTCAACTCGATGCAATAG
- Protein Sequence
- MALFVDNPSRHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRAQGGPTAEFQSPAEPNEPQRVSASPATSPSIKRRRRRKSSTGSTSLNMVGEEGRDDSQTVELVRDGITLSSVPQRRRDFHDERHHDHAQQTSENQHNISMDTLGVENNPATMAQGGQWSMMEHTYPRYSNACGGIVQAEGALYMSGAMEGDMSYGTLVQQPSCAPDQPAPEPSPAHAHPHQHLHPHPHPHPQPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPDLKDEAPPPDQQMLLCPPHPVSVGFIDSRPIDFPLQGMAHNSPLNILGVNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00790473; iTF_00791321; iTF_00791121;
- 90% Identity
- iTF_00790473;
- 80% Identity
- iTF_00790473;