Hchr022039.2
Basic Information
- Insect
- Hemistola chrysoprasaria
- Gene Symbol
- Mblk-1
- Assembly
- GCA_947063395.1
- Location
- OX346730.1:8513379-8548286[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-14 1.4e-11 44.5 0.0 1 38 360 398 360 404 0.94 2 2 2.6e-18 1.7e-15 57.1 0.0 1 43 567 610 567 612 0.95
Sequence Information
- Coding Sequence
- atgatctctaagtcaatagagtGTCTAGAACGTGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATACCAAGACGCGTTGATACCGAGAGCAGAGGAGCGCTCGAGCGACGACTCAATGCCCGCCACCGAGCAACCACCCGCGCTCAAGATCAAGACCATAGAGCAGATCAACGAGGACGAACGGAAGGTAATGTTACATAGACTGGTTGACACCGAGAGCAGAGGAGCGCTCGAGCGACGACTCAATGCCCGCTACCGAGCAACCACCCGCGCTCAAGATCAAGACCATAGAGCAGATCAACGAGGACGAACGGAAGAGAGCAGAGGAGCGCTCGAGCGACAACTCAATATTCGCCACCGAGCAACCACCCGCGCTCAAGATCAAGACCATAGAGCAGATCAACGAGGACGAACGGAAGTAGCTAATGTAATAAAAACTCTTGAACCAATTGAGCGCGGTgtgACAGAAGATGTAAGCCCAAAGCCCCGCCAGGAGACGATCCTAGAGAGTCTGATCAAACGTCCAGCCACGCAGCCCAAGGTCGAGCTGGCGGAAGAACCCGCAGACTGGAAGCCTCCAGACAAATGTTACTTCTGTACTGATGGCGAACGACCGGAGGGAGAACGGGAGCAAGCGCAGCGGGGTGCTACGAGTCCAGCCACCGAGTCAGACAGCAGTTCTGTGTCGGGCGCGAAGAGTCCGGCGGCAGCTGCTCCGCCTCTGCTGCAACACCTGCTGCAGCTGCAGAGCCCGCAAACTATCGCACAGTTCCAGCAGATGATCGCTGCGCTGACGGCGCTGGGCACGGGGCTGGTGCCGCCTCCGTTCGCGCAGAACGTCTGGATGATGCCCAGGATGGTACAGAACGCCAGGCCTCAGTGTGATAGCAGGGTACCAGAAGACAAGGCCGCCCCGCCGTCTCCGAGCCTAACAGAACAGCCCTTGGACCTGAGCGCCAAATCTACGTCGAGCGCCAGCGGCACTCCACCGCCCGATGCTAAGAGCTTGGATCAAAGATTAAAACGAGCAATCTTGGACGGCGCCGGCAACAGTTCCAAACGGAACTACACCGAAGACGAGCTACAATCAGCCCTACGAGATATTCAGTCAGGTCGACTGGGGACGCGGCGAGCCGCTGTAGTTTACGGCATCCCTCGCTCCACTCTCAGGAATAAAGTCAACAAGTTCGGTCTCAACACCGATCAGCACGACTCAGAACCGGACAGCGATGTCGAAGGCACCGACTCTCCACCGTCAGTCATCCTCAAGATACCCACCTTCCCCCCGCCGGACGACAAAAGCTCGTCCCCTGCGACTTCAGTCTCAACACCAATAACTCCTATAACGCCGATGCTCCCCAACCCTCAACCTCAGCTCAACCCGGCATCGCAACTTCTTCTCCCGCCGTCGGTCTTCGCCGATCCACCTTCGACGCTATTCACTTCAATTAGCGATGTTATAGCCAAGAGCATCAGCCAAAAGTTTCAACAGCCGCTGGATCGGCCGCAGCCCGACCAGATGTCCTACATGCGAGCTCAAGACAGACACGTCTCTGTAATTAAAACGCCTCCAGAAAACATGAGGAATCAGTACCAAGGGCCGAGCAATTCGAGAGCTCAACCAAATAACAACGGCCAGCCTGCCGGAGGCAAGGGGACGAGACCCAAGCGGGGGAAATACAGAAACTACGATCGTGACAGCTTAGTCGAAGCTGTGAAAGCGGTTCAACGAGGAGAGATGTCGGTGCATCGAGCCGGGTCGTACTACGGCGTGCCGCATTCTACCCTGGAGTATAAAGTTAAAGAGCGGCATTTGATGAGGCCGAGGAAACGCGAGCCGAAACCTCAGCCCGAAGTTAAACCGCAACCGCCGAAGCCGCCACCACCTAAACCGACAACGAAGCCGTTCTCGAACGGCCTGAACGGACCGGATGGCTATCCTGGATATCCGTTCTGGGCCGGAGCTAATTTTAACCCCCACCCGCCGCAAGATCTGTACGCGTCGCATATGATGCAGCGGTTGCGGGCGGAGGCGCCGCCCGCGAACGGTTCGTTCCTGGAGGGGATTATAAGGTCGAGTCTGGAGCGGCCTGGAGCAGCGTTGCTGCAGCGGTTGAACGAGCCGAGGGGGATGGGGGAGAGTCCGAGCTTGGTGCGGAGGCTGACGGGGGAGGGGGAGGGTGGGGAGGAGCcgccggcgcggcgcgcgcgcatCGCCAGCACGGACCGACAGCTCGCTGCCGAGATGCGTGAGGCTGTCCAACGCTTGCGTGCGGACAAGCTGCGTCCACGCAATGGAACCCCCACTCCCCCCGCGCCGCATTCACCTCCCCCGGCGCCCCCCGACCGCGCCTAG
- Protein Sequence
- MISKSIECLERVAEELMGRRKWKLYQDALIPRAEERSSDDSMPATEQPPALKIKTIEQINEDERKVMLHRLVDTESRGALERRLNARYRATTRAQDQDHRADQRGRTEESRGALERQLNIRHRATTRAQDQDHRADQRGRTEVANVIKTLEPIERGVTEDVSPKPRQETILESLIKRPATQPKVELAEEPADWKPPDKCYFCTDGERPEGEREQAQRGATSPATESDSSSVSGAKSPAAAAPPLLQHLLQLQSPQTIAQFQQMIAALTALGTGLVPPPFAQNVWMMPRMVQNARPQCDSRVPEDKAAPPSPSLTEQPLDLSAKSTSSASGTPPPDAKSLDQRLKRAILDGAGNSSKRNYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLNTDQHDSEPDSDVEGTDSPPSVILKIPTFPPPDDKSSSPATSVSTPITPITPMLPNPQPQLNPASQLLLPPSVFADPPSTLFTSISDVIAKSISQKFQQPLDRPQPDQMSYMRAQDRHVSVIKTPPENMRNQYQGPSNSRAQPNNNGQPAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPEVKPQPPKPPPPKPTTKPFSNGLNGPDGYPGYPFWAGANFNPHPPQDLYASHMMQRLRAEAPPANGSFLEGIIRSSLERPGAALLQRLNEPRGMGESPSLVRRLTGEGEGGEEPPARRARIASTDRQLAAEMREAVQRLRADKLRPRNGTPTPPAPHSPPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -