Hchr000882.1
Basic Information
- Insect
- Hemistola chrysoprasaria
- Gene Symbol
- JARID2
- Assembly
- GCA_947063395.1
- Location
- OX346709.1:15846565-15864364[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-16 6.1e-13 49.7 0.7 14 89 407 477 382 477 0.83
Sequence Information
- Coding Sequence
- ATGCGGTTATCCCGGCCGGCGCGAGCTCTGCCTCAGTTCAAGACAGAAGGCCGGAGCATGCGGACCGTCCTTTGGAACCTATCGTACAAATTGCTCGCCTACCAGCCTGCAGCCTCTTGGACCATGTCGCTTTTAAAAATTTTGGACAAAACAACGAACGCTAAAAAGGTTTCATTCGAACCAAGAAGAAGTAATTCATTACCTATTTTGATAAGCAATGTAACTTCCTTAGTTTTAAATGATGCAAGAAGTGAAGTGAAAAAAGAAAGCGCTGATAAAATAGAAGAAACAATACCTGAACAATTAAACCTTAGGGAGCCGTCACTGGATCTACCAGATTTAAATCTACCTAATTCAGATGAGATCGGTGATACAAGTCACTGGCCAGTGAAAGTTGAGCAGATAGAAGATATATCTATTTCTTCACCGTCATTACGGGAGACATCTAAAGCTGTGGATGAAGATAGTATATCGCAATTGTCATGCACGTCCATGATTTTGCCCTCACCGCCACATATCTTAACACCGACATCTATTGTTGATGTTTACGAATTCAACGATGAAAGCGCGACCTTAACTCCACAACCTTATAGACCAAACAGAAACGACTGTCCGAATGAAAATACTGAGGGTAATACAGGGCATTCTGGAACGGACTCAATGGTATTTGCACCAAATAATTTAACAGAAATGGAAACAAGTACGCCAATGCGTAGCCAATGCGTGGCGTGCAGTGGCGACCTGCCAGAATGCGAAAATACTCTAGCAGAGCTTGCACCAAAGAGACCTAAAGTGATGAAACCCCAGAAAACAACAGTAAAAAGGAAAGTAGCTAAGAAAACAGCAGCAAGTGGGCAGAAGGCTAGTCATACAAATATGGAACCATCAACCAGTGCGTCGTTTCATGGAACTCGAAGTACTGCATCTAGTTCTAGAAGCAATTTAGATACTGTATCTACTACTCAAGGTTCAGTTAGAGAAGGACGGAGGTTTACGCCCACTTCTTCGGAAGCGGAAAATCCGATTCATTATGCAACACACATCAAATTTCTAAATCCGGAAATGGGTATATGCACCATCAAACTTCCGGATTCATTCAAGCCTCCACTCATAACTGACGATGACAGACCAGTATTCAAAATGAGTAGTCAGTACGTGAATAAATTGTATCAAAGATGGAGCCCGGCGACTCGAGAGTTACTCATGATTAAATGTAtccaaaaacaaaaaatgaaaaCATCTCCTTTGtttgAAGGCGTCGAGCTCGATCTCGTAAATCTTTATAAATACGTTCAAGAGCATGACGGTCTCAAAAACGTATTGTCAAAAGATAAATGGACTgagattataaataaactcAGAATCTCATCGAAAGGGCAACCAAGCAAAAAGCTAGAAAagctttattttaaatatttactgtTATATGAGACGATGACCTATCtggaaCGTGAAGACATTCACCATAAAGTATCGAAATGTTGGGAAGAGCTTCATAAAAAACACATGGAGCGTGCTCTTCGCCCTCTTTGGAGACAGGAGCGAATGATGAACTTGGAGCCATATAATGATGACTCGCCAACGGACCTCATCTCCCAGGCGTGCATGGAGGCTGAGGACTGTGTCGCACATAATAATAGGACGTGCACGCTAAAACAGTTTCGTAAGATTGCCGACCGAGTAAAAGCGGTATACTTGGCCGGCAAGCCGTCGGCGACAGTCGCGGAAGTAGAACAAGAGTATTGGCGGGTGGTGATGCTGGGTACTGAACATGTCAGTGTTAACGTTTCGTCGGTGGACACCACTGAATACGGACACGGATTTCCTGCTGATGAAGACGCCCCTTACGGATCTCATCCGTGGAACCTAAAGCGAGTGTGCCGGAGCGGAGACAACGTGCTCAGCTATCTTGACCCGACGGTCGGTATATCTGCCCCGTCATTACAATACGGAATGGCGTTTACTACGAGCTGCTGGCACATGGATCCTCACATGCTGCCTTGGATAGAATACCTTCATGAGGGACCTCCCAAAATTTGgtaTTCGGTGCCAGAAAGTCAAAGCAGCAACTTCAGAGCGGCTGTAAGCGCATTATGCCCTACAGCCGTACAGAACAAATCAATATGGTTGCCGGCTGACATCACTATGATCCCACCGAGCTTGCTACAGCAACACAACGTGACCTTAGACCGTGTGGTGCAGCACCCCGGTGAATTTGTTGTTGTCTACCCAAATACGTACTCTGCATCAATTGACACCGGCATGACCCTCTCAGAAGGGACATACTACGCGCCACACAGCTGGCTCCAAAACATTGAACATATTTTCAAGGAGTTGCGTGAGAATTGTGAGCCTAGCATGTTTCCAATGGAGCAGCTATTGATCGGACTGGCTCGCAATGAACTATCACCGCCGCACGTGCTCACACACACGCACACCGTGTTGCAGCCGCTGCTTACAGCCGAGCTACGACATCGCGCCGCTGCTGTACAGTTTGGACTGCGTATTCTTACGCCGCAGCAAGAGGCCGCTGAAGGCAAGAAATCTCGGTACACTCAAACAAACGAGTGCTTTTACTGCCGCTGCACCATTTATCTGTCAAGGGTGGTCGGGCTAACTGAAAGCGGAACCAGCATGTGTCTCGAGCATGGCCTACGGTTATATGATAAATCTAAAAAGAAAAATGTGGACGTGAAGGGTTCTTATTGTCTTCTCCATTACTCCAACCAGGAGTTGGAGGATGTGATCACGTTACTCCAGTCGCGCATATCCAGCATGGCCACAGGTTGGGCACTAAACACCCAGTAA
- Protein Sequence
- MRLSRPARALPQFKTEGRSMRTVLWNLSYKLLAYQPAASWTMSLLKILDKTTNAKKVSFEPRRSNSLPILISNVTSLVLNDARSEVKKESADKIEETIPEQLNLREPSLDLPDLNLPNSDEIGDTSHWPVKVEQIEDISISSPSLRETSKAVDEDSISQLSCTSMILPSPPHILTPTSIVDVYEFNDESATLTPQPYRPNRNDCPNENTEGNTGHSGTDSMVFAPNNLTEMETSTPMRSQCVACSGDLPECENTLAELAPKRPKVMKPQKTTVKRKVAKKTAASGQKASHTNMEPSTSASFHGTRSTASSSRSNLDTVSTTQGSVREGRRFTPTSSEAENPIHYATHIKFLNPEMGICTIKLPDSFKPPLITDDDRPVFKMSSQYVNKLYQRWSPATRELLMIKCIQKQKMKTSPLFEGVELDLVNLYKYVQEHDGLKNVLSKDKWTEIINKLRISSKGQPSKKLEKLYFKYLLLYETMTYLEREDIHHKVSKCWEELHKKHMERALRPLWRQERMMNLEPYNDDSPTDLISQACMEAEDCVAHNNRTCTLKQFRKIADRVKAVYLAGKPSATVAEVEQEYWRVVMLGTEHVSVNVSSVDTTEYGHGFPADEDAPYGSHPWNLKRVCRSGDNVLSYLDPTVGISAPSLQYGMAFTTSCWHMDPHMLPWIEYLHEGPPKIWYSVPESQSSNFRAAVSALCPTAVQNKSIWLPADITMIPPSLLQQHNVTLDRVVQHPGEFVVVYPNTYSASIDTGMTLSEGTYYAPHSWLQNIEHIFKELRENCEPSMFPMEQLLIGLARNELSPPHVLTHTHTVLQPLLTAELRHRAAAVQFGLRILTPQQEAAEGKKSRYTQTNECFYCRCTIYLSRVVGLTESGTSMCLEHGLRLYDKSKKKNVDVKGSYCLLHYSNQELEDVITLLQSRISSMATGWALNTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -