Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947063395.1
Location
OX346732.1:10170328-10191754[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.8e-25 1e-21 77.8 0.0 2 89 101 184 100 184 0.93
2 3 2.7 7.3e+03 -1.9 0.0 6 40 901 933 898 954 0.68
3 3 8.5 2.3e+04 -3.4 0.0 2 20 975 993 974 998 0.80

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAGCATGGGGGACTCGGCGTCCCCCATGAAACCTGACAATTTTACGTTTACTCCGCCTCCGGAGGCTCCTGTGTTTGAGCCCACGGCCGAGGAGTTCTTGGACCCGCTGGCATACATCAGCAAAATACGACCCATCGCCGAGAAGTCTGGCATTTGCAAAATCAAACCACCAGCGCATTGGCAGCCACCCTTCGCAGTGGATGTGGACCGGCTTCGGTTCACACCCAGAATACAACGGCTCAATGAGTTAGAGGCTATAACCCGAGTGAAGCTGAACTTCCTCGACCAGATCATCAAGTTCTGGGAGCTGCAGGGCTCCGTTCTGAAGATACCCACGGTCGAGAGGAAACCACTGGACCTGTATGCGCTGCATAAGATCGTCAAAGAAGCTGGTGGTTTCGACGCGTGTTCAGCGGAACGAAAATGGTCTAAAATCGCCCGACGCATGGGCCACCCTCAAGGGAAAGGCATCGGCTCGATATTGAAGAACCATTATGAGAGGATTTTGTATCCTTACGACGTTTTTAAGAGCAACGGCGCTGTATCGGATAATAAGGAGACTAAAATCGAAGTGAAATCCGAACAGACTCCAGAGAAAACCAATCCAACCACTCGCAGCCGGTCCATATCAAAATGTACGGCGGCGACCCCTCCGTCCATGAGAAGGTATAAGGGAAGCGACCCAGAACCGGCGGCCGAGGGGTCACATACTGAGGGGGCCTTGCCGGGGAACAATGATAAGGGCCTGAAGACCCCTGTCAAGGAAGAAAGCCCGGAGACCAGGAGAAGTCCTCGCGAGAACAAGTGGATGTCGGCGGGGGGCAGCTGCGGAGCTCGGTCCAGGGTGACGAGGTCCACTCGGCTCCGAGAACATCGCATGTCCAACATGACGGTGTCGGTGACGCCCGCGCCGGACTCCTCTTGTAGACCCACTGCTGCGATCACCGCTGCTGATGATCCTCTGGCAAAATACATGTGTCGCGTATGCGGGCGAGGCGACGTAGAGGAACAGATGTTGTTATGTGACGGATGCGACGACTCGTACCACACGTTCTGTTTGCTGCCGCCGCTGGCTGACGTGCCTAAAGGGGACTGGAGGTGTCCCGTCTGTCTCGCTGAAGAGGTATCAAAACCCACGGAGGCGTTTGGTTTCGAGCAAGCAACAAGAGAATACACGTTGCAACAGTTTGGCGAAATGGCAGATCAATTCAAATCGGATTACTTCAATATGCCTGTACATATGGTGCCGACGTCGACAGTGGAGAGAGAGTTTTGGCGCATAGTATCATCTATAGACGAAGACGTCACCGTGGAGTATGGGGCTGATTTGCATTCCATGGACCATGGGTCTGGGTTCCCAACCAAGTCCTCGGCGCACCTGTACCCAGGAGAGCAGCAGTACGCGGACTCCAGCTGGAACCTCAACAACCTGCCCGTGCTGGAGGGCTCCGTGTTGGGACACATCAACGCTGACATATCTGGCATGAAGATCCCGTGGTTGTACGTGGGCATGTGTTTCGCGACGTTCTGCTGGCACAATGAGGACCACTGGAGTTATTCTATCAACTATATGCATTGGGGGGAGCCTAAGACTTGGTACGGCGTCCCCAGTTCAAAGGCTGAACAGTTCGAAGCGGCGATGAAGGCGGAAGCTCCCGAACTGTTCCAGATGCAGCCAGACCTGCTGCATCAGCTCGTCACCATCATGAACCCCAACGTCCTCATGAAGGCTGGAGTTCCTGTCTACAGGATAGACCAGCACGCCGGCGAGTTCGTGATAACGTTCCCGCGAGCGTATCACGCGGGGTTCAATCAGGGGTACAACTTCGCTGAGGCTGTCAACTTTACACCAGCCGATTGGTTAAAAATGGGTCGCGAGTGCATATCCCACTACTCAACATTGCGTCGTTACTGCGTGTTTTCGCACGACGAGTTGGTTTGCAAGATGGCGCTGGAAGCCGAGTCCTTGTCGTTAACTGTCGCTCTGGCCGCCTACAGGGACATGAGGAGCATGCTCCATGATGAGAGGAAGCTCAGGAAGTCACTGCTGGACTGGGGAGTGACGCAGGCGGAGCGCGAGGCGTTCGAGCTGCTGCCGGACGACGAGCGGCAGTGCCACTTCTGTAAGACCACGTGCTTCCTGTCCGCCGTGTCCTGCGCCTGCTCCCCGCGCGTGGCGTGCCCGCGGCACTGCGCCGAGCTGTGTCGCTGCGCGCCCGCCGCGCACAAACTGAGataCCGCTACACACTAGACGAGCTACCGGCGATGTTAGACAAACTGAAGAAGAAGTCGGAATTGTTCCGCGAGTGGGCCGAGGCGGTTCAGAACGCACTAGATCCAGACACGCCTAAAACCTGTGACCTGGACGGACTGAGGGCGCATTTGAAACGGGCCGTTGAACTTAAGACGGGAAACGTAAGACACAAAAGACGTAGAGTCGCCGAAGGAAATATTACTGATTCCATAAGTGCCATGAGGAAGGAGTTATCAGAGTTAATTGATAGCAGATTCAATACCCTGAGCGAAGAAATAAAGGAAAACAATGCAGAgcaaaataaaacattacagtTTATGGCGAACAAATATGATGAATTGAAATCTAGATATGATATATTGGAAGAGGACAGGAAAGAAGATAAAAGGTACATTAGAGAACTTGAAGATAAGGTGGAAGCGCTTCAGAAAAACCATTATGCTACTACAGTTGAGATAAGAAATATTCCAAAGAAGACGAGAGAAACCAAATTTGACCTTTCCGAACTTGTTTTAAAACTAGGAGCCGCTCTCAAACTTGACATTCAGAAATCTGAGATAAATGACATATATAGAGTGAATTCTCCGTCCAAGATTGAACCTCCGATACTAGTTAAGTTCACGACTGCTCTACGAAAAGAAGAGTTTATTCGAACGATTAAAAAGGTCTCCAAAGAGCGCGCTCATGAACTGGCTAACGTGCAGGTCAAGCTTGGCCTGCCACCATCACCTATATATGTATCAGAGCATATGACGGCGAAATCAAGAAGATTATTTTTTCTGGCTCGAGACTTCGCCAAGTCCAACCACTATGACTACTGTTGGTGCTCTCGTGGAAGAATCTTCATCCGGCAGAAAGAAGGTGCTCCTCAACTACTGGTCAAAGACGAGCTACATCTGGATGTACTTAAGAAGCAACAAGGAACAATCTAA
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFDACSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSNGAVSDNKETKIEVKSEQTPEKTNPTTRSRSISKCTAATPPSMRRYKGSDPEPAAEGSHTEGALPGNNDKGLKTPVKEESPETRRSPRENKWMSAGGSCGARSRVTRSTRLREHRMSNMTVSVTPAPDSSCRPTAAITAADDPLAKYMCRVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRIVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYMHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQMQPDLLHQLVTIMNPNVLMKAGVPVYRIDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECISHYSTLRRYCVFSHDELVCKMALEAESLSLTVALAAYRDMRSMLHDERKLRKSLLDWGVTQAEREAFELLPDDERQCHFCKTTCFLSAVSCACSPRVACPRHCAELCRCAPAAHKLRYRYTLDELPAMLDKLKKKSELFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAVELKTGNVRHKRRRVAEGNITDSISAMRKELSELIDSRFNTLSEEIKENNAEQNKTLQFMANKYDELKSRYDILEEDRKEDKRYIRELEDKVEALQKNHYATTVEIRNIPKKTRETKFDLSELVLKLGAALKLDIQKSEINDIYRVNSPSKIEPPILVKFTTALRKEEFIRTIKKVSKERAHELANVQVKLGLPPSPIYVSEHMTAKSRRLFFLARDFAKSNHYDYCWCSRGRIFIRQKEGAPQLLVKDELHLDVLKKQQGTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-