Hnig028560.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hemicrepidius niger
Gene Symbol
nfxl1
Assembly
GCA_963082805.1
Location
OY720165.1:28527381-28530456[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 4e+04 -5.0 1.9 15 19 168 172 168 172 0.85
2 18 0.15 3e+03 -0.5 0.8 4 10 203 209 202 209 0.95
3 18 2.9e-06 0.059 14.5 18.4 1 19 217 234 217 234 0.99
4 18 4e-07 0.008 17.3 15.3 1 19 270 288 270 288 0.94
5 18 6e-09 0.00012 23.1 12.6 1 18 323 340 323 341 0.99
6 18 0.00069 14 7.0 13.8 1 18 376 393 376 394 0.97
7 18 0.086 1.7e+03 0.3 3.7 1 12 403 414 403 414 0.94
8 18 2 4e+04 -5.0 1.6 6 10 418 422 418 422 0.93
9 18 5.6e-05 1.1 10.4 17.1 1 18 428 445 428 446 0.94
10 18 9.1e-10 1.8e-05 25.7 11.2 1 19 455 473 455 473 0.97
11 18 0.00051 10 7.4 7.4 10 19 522 531 519 531 0.90
12 18 0.01 2e+02 3.2 5.2 1 12 541 551 541 551 0.90
13 18 2 4e+04 -6.9 4.5 14 18 579 583 579 583 0.86
14 18 1 2e+04 -3.2 0.6 1 8 610 616 610 617 0.60
15 18 0.006 1.2e+02 3.9 4.2 1 11 620 630 620 631 0.90
16 18 2 4e+04 -4.7 2.3 15 18 645 648 644 652 0.68
17 18 6e-06 0.12 13.5 16.4 3 19 661 677 660 677 0.94
18 18 5.2e-05 1.1 10.5 11.5 1 17 720 738 720 740 0.86

Sequence Information

Coding Sequence
ATGAGTGGAGTTGGGAAAAATTCGAAGAATCCGTGGCAAAAAAATCAGCAACCCCTTAAAAAATCACAAAATGCAAAACCCCATAACCTACCAGGTAATAATCTTAcaaaatctgaaattaaattcaaagaaGCACAGAAAAAACTCCAGGCAGCTGTACAAAAATACGCCAAAGAATATGATTCTTCCTCAGATGAAGAAGAATTAGAAACGAACAACATAATTGgtgcaattattaaaagttatacCCAAACTGGGGGTGCAACAAATAGTTTAAACCGAACTCAGGTATTTCTAGAAGATACTTTCTTATCAGGAGTCAGTACATGCCTTATTTGTATATCGTCCGTTAAAAGAACTGATTCTATATGGAATTGTTCTGAATGCTACTGTGTCTTTCATTTAACATGTATTCAACGTTGGTCAAAAGATACCATCACCCAACAAAAACAAGCCTTAGAAGATCAAATTCTTGTCCGCCAAACTAAAATATGTTGGGGTTGTCCAAAATGTAGACAAGTTTATGGCCCATCAGATATTCCAACAAAGTATgaatgtttttgtaaaaaaactgTTGATCCTTCTTTCCAACCGTTTTTAATTCCACATTCTTGTGGTGAAACTtgtggaaaaaatttaaaaccgtaTTGTGGGCACGGTTGTGTATTATTATGTCATCCAGgaCCTTGTCCACCTTGTCCAAAGACCGTATCGGTTACTTGTTTCTGTGGTTCCCAACCCCCACGTGTTCAAAGATGTAGCAGCAAAGAATGGTCCTGTGGTTCgccttgtaataaattattatcatgtCAGAAACATAAGTGTGCTCAACCGTGTCATTCTGGAGAATGTCTACCATGCCCAAAGAAAAGCATCCAGAAATGTGTTTGTGGATCAAGCAAGAAATTAAGGGATTGTACAACCCCTTTATGGCAGTGTGATAAAgcTTGCAATAAAGTTTTAGAATGTGGTCACCATAATTGCCTAGAATTATGTCATGTAGGAAATTGTGATCCTTGTATTTTATCAAAAACTCGTACTTGTCCATGCgggaaatctaattataatttacCTTGCACTGAGGATACCCCAACATGTGGTGATACTTGTGGAAAAGTGTTAGAATGTGGTGCTCATGTTTGCCACCAACGTTGTCATAAGGATAAATGTGGCACCtgctTGGAAATAGTTGCAAAATTATGCCGTTGTGGGTCACACACCAAGGAGGTTCAATGCCATAAACCGTATCTGTGTGAGAGCAAGTGTAAACAAGTTAAAGACTGCAACAAACATCCTTGTAATCGAAAAtgtTGTGATGGAAATTGCCCTCCATGTGAAAAACCTTGTGGCCGTACATTAAGTTGCAGTAATCATAAATGCAGCTCTATATGTCATAGAGGACCATGTTATCCATGCAGTTTAACCGAATCTGTTTCGTGTCGGTGTGGAGGAACATCAATTACAGTACCTTgtggaagaaaaaataaaacaaggccTCCTAAATGCACCAAACAGTGCATGTTACCCCCTGATTGTCATCATGAGAAACGTGAACCCCATCGTTGTCATTTTGGAGATTGCCCTCCTTGCAGACAGAGATGTGATAAAGAAAGACCAAAGTGTTCGCATAATTGCCCAGCATCCTGTCATTCTGCAGTGCTTGTTAAAGTGGAAGGTCAAAAAGCTTCAATGCCTTGGGAACAAACCGAACCTCAGCTTGAAATTAAAGCATTGCCTTGTCCGGATTGTATTGTTCCTGTTCCGATTAACTGTTTAGgaaaTCATGAAATTAGTAATTGGCCTTGCCATTTAGCAAAGGTTTCTAGCTGTGGAAGAACATGTCAAAGGTTACTTCCTTGCGAAAATCATCGATGCTCTCTTATGTGTCACTTGGTTGAAAACGCAACGGATGATCAAAAAGCTGGGTTAAATTGCCAAAAATGTGATGGCAGTTGTACAAAACCAAGACCTGAAGGGTGTCAACACAACTGTCCAAAAGCTTGTCATCCTGGATTGTGTCCCCCATGCAAACAAATGCTACGAATCAGATGCCACTGTGGCCTTAATCAACCCTATGTTGCATGCAAAGATTGGACTTCATCTGACAACAAGGAGGAACTACAGAGTTGTGGAAATCAATGCCCAAAAAATtatgaatgTGGTCATCGTTGTCGTTCAAATTGTCATTCTGGAGTGTGTCCAAATTCTGAACAatgtaaaaagaaaatgaagGTAACATGCAActgtaaaagaattaaaaaagaattttccTGTGAAACTGTTCGTGCAAACATGGCTTCCGTTGCTTGTGAtgaaatatgtttacaaaaacaaCAGGAAGAAAAGATTGTAAAGGATTTAGAAAAGGAACAAAGAAAAAAGGAAGAagagttaaaaaatttgaaggaaTTAGAGaaatatgaaaagaaattcCAGGGCAAGAAAAGGACCAAAGAAAGGAAAACTTATGACCAAACCGAAGAACAATCTTTGTTACAAAAGTATTGGTTGGGAATTATTTCTCTTGTAATAGTTTTACTTTcgttatgtttttattttatgttactttaa
Protein Sequence
MSGVGKNSKNPWQKNQQPLKKSQNAKPHNLPGNNLTKSEIKFKEAQKKLQAAVQKYAKEYDSSSDEEELETNNIIGAIIKSYTQTGGATNSLNRTQVFLEDTFLSGVSTCLICISSVKRTDSIWNCSECYCVFHLTCIQRWSKDTITQQKQALEDQILVRQTKICWGCPKCRQVYGPSDIPTKYECFCKKTVDPSFQPFLIPHSCGETCGKNLKPYCGHGCVLLCHPGPCPPCPKTVSVTCFCGSQPPRVQRCSSKEWSCGSPCNKLLSCQKHKCAQPCHSGECLPCPKKSIQKCVCGSSKKLRDCTTPLWQCDKACNKVLECGHHNCLELCHVGNCDPCILSKTRTCPCGKSNYNLPCTEDTPTCGDTCGKVLECGAHVCHQRCHKDKCGTCLEIVAKLCRCGSHTKEVQCHKPYLCESKCKQVKDCNKHPCNRKCCDGNCPPCEKPCGRTLSCSNHKCSSICHRGPCYPCSLTESVSCRCGGTSITVPCGRKNKTRPPKCTKQCMLPPDCHHEKREPHRCHFGDCPPCRQRCDKERPKCSHNCPASCHSAVLVKVEGQKASMPWEQTEPQLEIKALPCPDCIVPVPINCLGNHEISNWPCHLAKVSSCGRTCQRLLPCENHRCSLMCHLVENATDDQKAGLNCQKCDGSCTKPRPEGCQHNCPKACHPGLCPPCKQMLRIRCHCGLNQPYVACKDWTSSDNKEELQSCGNQCPKNYECGHRCRSNCHSGVCPNSEQCKKKMKVTCNCKRIKKEFSCETVRANMASVACDEICLQKQQEEKIVKDLEKEQRKKEEELKNLKELEKYEKKFQGKKRTKERKTYDQTEEQSLLQKYWLGIISLVIVLLSLCFYFMLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00979049;
90% Identity
-
80% Identity
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