Basic Information

Insect: Hemicrepidius niger
Gene Symbol: -
Assembly: GCA_963082805.1
Location: OY720163.1:449314-454486[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.7 9.7e+02 1.7 0.0 2 23 338 360 337 360 0.87

2 14 0.00012 0.012 17.1 0.1 1 23 415 438 415 438 0.97

3 14 2.1 2.1e+02 3.8 0.1 2 21 445 464 444 465 0.91

4 14 7 7e+02 2.1 1.1 2 23 532 555 531 555 0.88

5 14 0.00097 0.097 14.3 4.6 1 23 558 581 558 581 0.96

6 14 0.029 2.9 9.6 2.1 2 23 588 610 587 610 0.95

7 14 0.014 1.4 10.7 4.6 1 21 767 787 767 788 0.95

8 14 0.001 0.1 14.2 2.2 2 23 800 822 799 822 0.94

9 14 0.081 8.1 8.2 1.2 1 23 825 848 825 848 0.96

10 14 0.87 87 5.0 0.4 2 23 908 930 907 930 0.94

11 14 0.2 20 7.0 0.9 2 23 939 961 938 961 0.94

12 14 8.3 8.2e+02 1.9 0.1 3 23 968 989 967 989 0.88

13 14 1.3 1.3e+02 4.4 0.4 2 23 1219 1241 1218 1241 0.90

14 14 0.38 38 6.1 0.9 1 23 1254 1276 1254 1276 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.7	9.7e+02	1.7	0.0	2	23	338	360	337	360	0.87
2	14	0.00012	0.012	17.1	0.1	1	23	415	438	415	438	0.97
3	14	2.1	2.1e+02	3.8	0.1	2	21	445	464	444	465	0.91
4	14	7	7e+02	2.1	1.1	2	23	532	555	531	555	0.88
5	14	0.00097	0.097	14.3	4.6	1	23	558	581	558	581	0.96
6	14	0.029	2.9	9.6	2.1	2	23	588	610	587	610	0.95
7	14	0.014	1.4	10.7	4.6	1	21	767	787	767	788	0.95
8	14	0.001	0.1	14.2	2.2	2	23	800	822	799	822	0.94
9	14	0.081	8.1	8.2	1.2	1	23	825	848	825	848	0.96
10	14	0.87	87	5.0	0.4	2	23	908	930	907	930	0.94
11	14	0.2	20	7.0	0.9	2	23	939	961	938	961	0.94
12	14	8.3	8.2e+02	1.9	0.1	3	23	968	989	967	989	0.88
13	14	1.3	1.3e+02	4.4	0.4	2	23	1219	1241	1218	1241	0.90
14	14	0.38	38	6.1	0.9	1	23	1254	1276	1254	1276	0.96

Sequence Information

Coding Sequence: ATGGATACAAAACTGTGCAGAATATGTGGAAAACTGAGCGAAAATTACGTCCACATTTTTAAAACCGAAGGACTAAAGAACAAAATTGAAACATGCCTACCTATCATTGTATCCCCACACTGTTTACTACCGGACACGATATGTTCCGAGTGTTTGGAAAACGTAGACAACTtttacagttttataaaaaattgtttacaaaacatCATCGTATTGGAAGCACAGTACGATATCATGGAATCCTGTTTAAAGACAAAGAGAAAACATGAAAAGGGTTGCCTTACGGATTTCGCTTCAGTAAGATACGATAAGAACATCCAAACAGACGAAGACTTTGCCGAGTTACTTCTACAAACGAAAAACATGCATTTCGATCCAAAGATTGaacatttgaattatttacaaatgGAGAAACTTAGTGATGCTCTTCGTAATGCCGATAACATTATCAACGGGAGGGAACCGGACGTCCACGTCGCCACAAAccttataaatattaaacaagagCCCTCTTTTGGTTTGGTTAATTATGATGTCGAATCCGGTGGGGAATCAGACAATGAAAACGATAGGAATATGGGTAAGGTCGTGCTTACGTCGAACAcggtaagaaataaaattaaacctcAAAAAGAAAAGATTCCAAAAATACATGAAAATCggacaaagaaatattttgacgaTCCAGAAAACGATTTAATAAACGAAATTGCACAACGTAAAGATCTCAAAAGAAAAAGTGATACTATTTTACCGCATAGGACGAAAATCTTTAAAATGGATCCTAGTAATAGAAGGAAGAATAGACAACCGAAGAAAGTAGAATATTCTAATAAACCCGATGGTAGTATTcctaatttaacttttaataacttggaaaaaatttacgaagaaatggaaaaaaatagtttaaccCAATCGGAAAAGGATAAAACGGAGGACTATATAAAAGAGGAGAAATTTACTCCCCCGCAAcaggttgaTAAAGAAATAAACAATTCCCTTCCGCAAGTTTGTTTATTGTGTGATGCGCAGTTCTCCGGGGGTACAACTCTTGCGGCTCACGTTTATGAAATGCACGGAATCGACATGGCTCAGGTTTTATTATCGGAACCGGTTCCAGAACGGAAGAAGAAAATACCAAACCTAGTGAAAATTACAGatctaaaaagtaaaaatgacGTACAAGacGGTAGTACAAGGGATCAAGTATTTGAAGAGCCGCCTACACTTCAACCAACATTTGTTTGTCCGATTTGCCCAGCCGTCTTGACAAACCGATCGGATCTCTTTACTCATTTGAAAGTTAAACACGGGAAGCACGCGGTGCTTATGTGCGGGCTTTGTTTGTACGTTGCAAGTTCGTACACGAACTTAACAAACCATTTAGACACTTGTAAGCAGCAACATAATGTCACGTCGAAGTATATTTGTAAGATCTGTTGGTATCACGATGATAATTCAAAATTCATGGAAAATCACATCGCAGTGCATGACTTTATCCTCGCTTTTTGTAAGAAACAAGCCAAAATGTTTGACCCGTGTGATTATATCGAAGTTAATTCTAAttgcgaaaacgttaataagTTATTAACGTGTACGGAATGTAATCAGGGTGGATTCGTGACGTTCAAGGATTTTAGTACGCACAGACGAAGTCAGCATCAAATTTTCCATTGCGATTTGTGTAATAAGTTTTATGGGCGCAATTCGCATTTATGGAAACACGTAAATAGGTTACATAAAGGACATCCCAGCATCACGTGTCAGCTTTGTTACAAAACGAGCGCTTCGAAATATCATCTTGCGCaacatttcaataaaattcaTAGCGCAAAACCGTTTAAACAAAAGCAAACCGATGTTAGTGaagaaaatgataattttatgaCACAAAAATTTCAAGGGTTTGATTTTCAGTCCGTACGACAAAGTTTTATGCGGCAAGAATTACTTGAGCAGGAACGCAAATTGTGTTTAAGCGAAGACGGCAATTCCGATGGGGACGATCTTGAACTTTACAACAAAGATTCGAATTTAAAACACAGCATTAAACGAGAGgtgAAAACGGAATCGACCGTGCATGAGACGGAGTGTTCCGATTTAGAGCTTTATTCCAACGATCAGGAAGAATACGAACCTCGAGAGATTTCCGATGGCAAACCGAACCTTCCCAGTGAATCAACCAAagtgaaaaaagaaaattcctCGGTGTCCCCGCCAAAAGAAATCGATGCGTCGAGCGATTTATACAcgaatattataacaaattataccCCGCCACAAAACGAAGGCGAATATAAATGCCCTAAATGCTTTAAAGGATTCCACAAACGTACCCTCTTGAAAAAACACAAGAAAAATTGTCGGCCGAGGCTCCAAAAAGATCTCTTAACGCGTTGCAAGACTTGTTCGCGTATCTTCAAAGATCGTCAAAGCCTCaccaaacatttaataaattaccattCGGAGTATACGTGCGAAATATGTGGGCAGAAAGTGCAGAGCAAATGTGAAATTGTTTCCCATATACGTTTTTCGCATCCCAGTTGCCATTTGTTTTGCCACTGCGGTAATATTTTACGCAGTAAAATAGATCTTGTGGAGCACAAACAGGATCACAGAAATTCCTTTGTGTGTCAGTTCTGTGCGGATTTATTACCcacgaaaattaaacttaaaatgcaCATTTTGAGCCTGCACCgtaaaatattaagtttaagTTGCGGAATTTGCCTGAAACTCTTTGAAACGCAACATATTTTACGTGACCATGTCCGTTTGGTCCACAAGGACGAGTTATCTCCGCTTACATCATGTACAGTGTGTGGAAAAAATTACGGTTCCAAATGGAAGACTTACgatcatttaaataaatcccATGGCCGTATTTTTAAAGCGTGTAAGGCTTGTTTAGATGTTTTTGATACCGAAGAAGAATTACAAACGCACTTTGAAACGTTACATATGAATATGGCGGCGCAAACTAAAGGTAATGTACAAAATACACAAAACGTAAACTCTCCTAGTCTTATTCCCGTAAATACCAACGTAAAATACGAAAGTGACGGTTGTTGTGATGAGAACGATGATAAAAATTCTTCGAGTGAATTTTCAAACGATGCCGAGACCTTCATGAATTATAATGCAAAGACGGAACCGAATTTAAGCGAAGAGGAAGAAGTAATGCCGCAAAGTAAACTTCACGAGTATCCAGATATGGTGGGGCAAGAAAGTCGGATATCGTTATTGGAGAAACGGTTAAtgggtaataaaaaattagctgAAATTGATAACTCTGGAACGTCTTACGATAAACTTACAAACAAGCACAAATCGAGTACTCAAACTGGTCCAAATAAGaaATTTAAAACGGATTCCTCTGAAGTTCCATTTCCGAAACAACCTAAGGATggttttaaagataaaaaatcATCCAAACCTTCAGATTCTTCAAGCACAAACGTTAAACGAGAGCTGGACAATGAGTTAGACCCAAACGGAATCCCCAATCCGTTACAGCATAGTTCCAAACGGACGGTATATGTAAACAGTAACGACCCATCTTTCtgtgaaatttgtttaaaaacgtGGCCGGCTAAAAAACACCTCTGGCAGCACTACATACGTTGTCATAAAACCGTTGCCGCGACCGTCTGCGGCATTTGTTTGAAAACCAACGACAATTATAAAACCTTACAGGTCCATTTACGAGAAACCCATCCGACGTTACTCCATGGACAAGGTTTTGgttcaaattttatttgtagGATTTGCGGAAGGTACCATAATGCAAGTTCCAAGCTTAAACTTCACATGGCGATCCATGAAAATTTTGATTGGGGGATTTTGGAGCATTTTGCGGGTACCAGGGGCAAAAATATGTTTCCAACCAAGGTGGAAAAATCAAACGATGGCATTAATAATGGGTATATGGAAGAACGTGATGAGTCGGTATTTTACATGAACCCTCAATGGATGCACGGGGCCCTAACGAACACGAATCACGAAAATGAAGGGATTAATTACGAAAGTTTAATAGAACAAGTGGAATGTTCTTCGGATTCCGATAACAATTCCGATCTTGAAGACACGAAATATTTGGAAAATCACGAAACGATAAATTCGTCTTCCGGTGAGGAAGAAAGCGACAACGAATCGGTTATTTCCGTGTCTGAAGAAAATTCCTTGGAAAGTCGGATGCTTCAAAATATGCTTAAGGAGAAATTTGATGTGAAACCAAATAACCTTAAGGCGAGTCGTGGGGTAAACTCGAATCAAAAAGAAGATTTTGCGACTAATCGTGTGGAAATCAAAAAAGAATATTCGAGTTCGGATAGCGAGGAAAGTTCGGATTCGAATCAAAGCGTGTCTGATACGGAGGTCGAGGTGCAAGTAAAAAGCAGCTGCTCGGAAGAAGACAGTTCGCAGTTTTCGTCGGAAGGATTCgtaaaacaagaaattttaaatcaaaacagCCAATCAAATTGTGAATTGGAAAATGCAAACCTTTTCGTTAGGAAACCTGAAGAGTTGGACTCGGCAATTCGTTCCATTAGTTACGAACAAGTTGCAAATGTTAACGAACAAATAGACGATGATATTTGCGAGATTCAACCGCAAACTTTAAATCAACATGAAATCCAATCGGCCGTAGATAGCATACTATAG
Protein Sequence: MDTKLCRICGKLSENYVHIFKTEGLKNKIETCLPIIVSPHCLLPDTICSECLENVDNFYSFIKNCLQNIIVLEAQYDIMESCLKTKRKHEKGCLTDFASVRYDKNIQTDEDFAELLLQTKNMHFDPKIEHLNYLQMEKLSDALRNADNIINGREPDVHVATNLINIKQEPSFGLVNYDVESGGESDNENDRNMGKVVLTSNTVRNKIKPQKEKIPKIHENRTKKYFDDPENDLINEIAQRKDLKRKSDTILPHRTKIFKMDPSNRRKNRQPKKVEYSNKPDGSIPNLTFNNLEKIYEEMEKNSLTQSEKDKTEDYIKEEKFTPPQQVDKEINNSLPQVCLLCDAQFSGGTTLAAHVYEMHGIDMAQVLLSEPVPERKKKIPNLVKITDLKSKNDVQDGSTRDQVFEEPPTLQPTFVCPICPAVLTNRSDLFTHLKVKHGKHAVLMCGLCLYVASSYTNLTNHLDTCKQQHNVTSKYICKICWYHDDNSKFMENHIAVHDFILAFCKKQAKMFDPCDYIEVNSNCENVNKLLTCTECNQGGFVTFKDFSTHRRSQHQIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCQLCYKTSASKYHLAQHFNKIHSAKPFKQKQTDVSEENDNFMTQKFQGFDFQSVRQSFMRQELLEQERKLCLSEDGNSDGDDLELYNKDSNLKHSIKREVKTESTVHETECSDLELYSNDQEEYEPREISDGKPNLPSESTKVKKENSSVSPPKEIDASSDLYTNIITNYTPPQNEGEYKCPKCFKGFHKRTLLKKHKKNCRPRLQKDLLTRCKTCSRIFKDRQSLTKHLINYHSEYTCEICGQKVQSKCEIVSHIRFSHPSCHLFCHCGNILRSKIDLVEHKQDHRNSFVCQFCADLLPTKIKLKMHILSLHRKILSLSCGICLKLFETQHILRDHVRLVHKDELSPLTSCTVCGKNYGSKWKTYDHLNKSHGRIFKACKACLDVFDTEEELQTHFETLHMNMAAQTKGNVQNTQNVNSPSLIPVNTNVKYESDGCCDENDDKNSSSEFSNDAETFMNYNAKTEPNLSEEEEVMPQSKLHEYPDMVGQESRISLLEKRLMGNKKLAEIDNSGTSYDKLTNKHKSSTQTGPNKKFKTDSSEVPFPKQPKDGFKDKKSSKPSDSSSTNVKRELDNELDPNGIPNPLQHSSKRTVYVNSNDPSFCEICLKTWPAKKHLWQHYIRCHKTVAATVCGICLKTNDNYKTLQVHLRETHPTLLHGQGFGSNFICRICGRYHNASSKLKLHMAIHENFDWGILEHFAGTRGKNMFPTKVEKSNDGINNGYMEERDESVFYMNPQWMHGALTNTNHENEGINYESLIEQVECSSDSDNNSDLEDTKYLENHETINSSSGEEESDNESVISVSEENSLESRMLQNMLKEKFDVKPNNLKASRGVNSNQKEDFATNRVEIKKEYSSSDSEESSDSNQSVSDTEVEVQVKSSCSEEDSSQFSSEGFVKQEILNQNSQSNCELENANLFVRKPEELDSAIRSISYEQVANVNEQIDDDICEIQPQTLNQHEIQSAVDSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00400174;
90% Identity: -
80% Identity: -