Hnig007940.1
Basic Information
- Insect
- Hemicrepidius niger
- Gene Symbol
- Hivep1
- Assembly
- GCA_963082805.1
- Location
- OY720160.1:41995831-42004362[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00031 0.031 15.9 0.8 1 23 246 268 246 268 0.98 2 8 0.0091 0.91 11.2 4.4 1 21 274 294 274 298 0.89 3 8 0.1 10 7.9 0.3 2 21 497 516 496 517 0.93 4 8 5.8e-06 0.00058 21.3 2.1 1 23 1150 1172 1150 1172 0.99 5 8 6.2e-06 0.00062 21.2 4.8 1 23 1178 1202 1178 1202 0.92 6 8 2.9e-05 0.0029 19.1 0.7 2 23 1693 1714 1692 1714 0.97 7 8 0.0028 0.28 12.8 1.7 1 23 1720 1744 1720 1744 0.91 8 8 0.0011 0.11 14.1 2.7 1 23 1762 1786 1762 1786 0.93
Sequence Information
- Coding Sequence
- ATGGAAAGAAGTGCCGATAGGTATTTGCACAAGAAGTTCAAAAAACAATTGAGTATCGAACCGAATCAGAATGATGAAAAGATCgcaaaaacaacagaaaatCGATGTGTACTGGACGAAGGAGGTAAAAATTCAATTGTTACAAACAACGCGGTGACCGTTAAAACAAGTGAAAGAAACAGTAACGAAAGTGTGCCAAAAGTTAGTACAAATAAcgaaaatacttttaataagGTGACTGTGCTAGAATCTTCTTCTAACTTAGATAAGTCTTCCATATCACATCTAAACTTAGTGAGTGTAGAAAAAGGTGAGAGTAACGTAAATGTTGTTAACGAGAGAAGTTTTAAACAAGCTGGGGAATTAGTGGATCCACAATCTTCTTCAAACAGTTGCATATCATATGTAATTTCAAAATCGAGTAGAGTAGAGAATCTGAATCAACCAGAAACCCATTACAGAGCCGCTAATTTTGATACGACAAGATTTAATGTTTCGGAACCAATCGCTACTATCCCTTCAGCTGATACGTCTTCCATTTTAGACAATGTATATTCTAAACAATACGTAACTTCGAAACTAGTTAATATTGACAAAGTAGGGGACATATCCTCATCAAACAGTAGTTTAGGTAACAACGACCATCATCAAGACGACTCTTGTAATTTAGTCGCAACAGAATCAAAGCCCGAACACAACACACCAGAACACGTAGAGAAAAGTTCCGGAGGAAAATACATTTGTTCCTATTGCAATTTGGCCTGTTCGAAACCGAGCGTTTTACAAAAACACATTCGGGCCCATACCAACGAAAGACCTTACCCATGCGTCAGTTGCGGATTTAGTTTTAAAACGAGATCGAATTTATACAAACATTGCAGATCGAGAACTCATGCCAATAGGGTTATGGGAAATAAAGCCCAAGAAATCCATAACGAAACGGACACGGATAGTCAAAATAAAATGGAATACATCGAGCAAAACTCAGTTGAATCTGGAGGTGAAGACGTCGTGGTAGCAACGAGGGAAGAAAAAGGTCCAATAGTGCAAGATATCAAAACTAAACCATACAAACCTCGATTTCATACAGCAAAAGCATTTTTTGATGATACAACAAAAGATAATCAAAAAGATGGAGAAGATCAAAAAGTTCCGGAAACCGTCCAGAATAGACCTTCGAATTCCGATTTATTATCTTTACACATCAAcgaagttataaataaaaataatgcgaTTGTAAATTCAAACGAACcttatttattaagaaaacgTTCTGTGGATAACAGTCTTGctgataatattaataataatgatgtGATTTATCATCCCCAAACACCCCAAATTTTAGTAGTGGATGATAAAAACGATGAACccttaaatttaacaaacaaaagtCGTAAAAGGTGCTTAAGCGAAGTCGGAGAACCAACCATGCATACGAGTTTAATCAaagaattacttttaaaaaatctttacgCCGATTCAATGCAATGCCCTCATTGTAAAATGATTTTCCAAACGGTCACTGAATTGGAATTGCATAAAATGCGAAGCTGTAAAGGATATCAGAAACAAGGGGCAAGATATAGTAGGAGCAGTTCTGTTAACGTTGCTTCAATTTTAACCAAGAATAAAAACGCTTTTGATAACATTCCACATTTGCAAAATACAATGTTTCCTTTAAAATCACCAGGACCTTTTTTAGGGAAAACTCGATTAGTCGAAAgcgataaaaataaatcattttcctTTGATGATGGCTTACCAACTTTCCAAAACCCAAGCGATATCTTAAGAACAACCTTACGTTATTCCATATCACCCTTAACAATCCAACATGATAAACCTAAAAAGCATCCGGTTAAATTATTCGGGGGTGAAGTAAAAATTACTCATACTTCAGGAGAAACCAAAAGCTTTAAAATTGATAGCAAAGATAATGGAGAACAGTACGATTATGGAGGAAGATTAAGCGAAAATCGCGTGGTTAAATCAAGTTTACAATCAGGAGGAACCGTGTTACAAAACAAACCCAATTACAACCCTAAACAAGATTCTTTAAGATCATCCCCTGATGTGATCAGAGTTTATGATAATACAACCCTATCACCTAGCATAGACATTGCAAACTTGGAGAaaacgaaatttaattttgaccgGCATCAGAATCACGAATTGGAAGGCGAACTTAAGTCTAATTCCGATTTACTGGTCAGACCATCCTGTGACGTCATAGGAAGTTCAAATTTCAACAACACAGCTTTgtataaatacacaaatattaTGGATTTTAGCCAAAAAGCTGTCAAGCTACTTGCTCCAAATTTAAAACAACCAAACCTCACTATTCCCGGAGTTCCCATGCCCAACAAAATCGTCTTACCACGTTCTCCATCATTAACTTTCGAAATTAAACCAGACACACCTAAAATCTTCGATCCTTTGCCAATTTCTAGAACAGATGATCGTATGAATGTTATAAACTTGCCCAAAACTCAAGAACCCGAAATAAAACACATGGAAAACATTCAGTTTGCCCAAAAACAAATAATGCTTCAACAAAAAATGGATCCGACTCCACCATCCCCAACCCCTTGCAACCCCCTTAACTTATTAGTAAATGGAAAAGTTGTACGGTATGTCCCAGGAATGCCTGGTCCCATCGCTGCAGAAGCCCATTCCGATGTTCCATATCGTTCAAATTTTCGTCCACAAAAATCAAATTTGCGCATAAATTTTCCGGAAACCCCCAGTCCAATGGAAACACAACCATCCCCCATTGAAAGAACGTTAGACCCAATGGTACCATACCATCCTAATCATCAGAAATTTCCTGACTCGAAACCTCCAAAATCCACAGAAATGAAATCGCCCGCTCCAAAAAACGAGATGAAGTCTCCAAACCATTCAGCAGCTTCAAGTGAACTACCAAGAAAATTTGCTCGGCCAAATACCTTAGCCCTTAAACCAAGCATAGCCGCCCATAAGCAACATCATGGACTAACCCCTACCATGTTCAACCAAATTCTTATTAGTCCTGATACGCCAAGGGTTGCAAAGAAATATATGCAGCATTTTTTGCATGGGAACTATTTTAGTTATTTGGGATTGAAAAGTTCAACCAAGTCCGTGTATTGCACGTTGAATAAAACGCAACCCTCGTATGTTCCACATTTTAAGAAGCTGAGTATGTATTCGGAATGGAGACAACAAGATAATAAAGCTGATAAATTATATGTTAGTGGGTATGATTCGAGACAACGGCAACAGAAATATGCTACTGCCGGAAAAGCTGCTGTGGATTTGGTTGTCCATTCCAGTTATAAGTTTATTGTTACTGAATCATCTTCTGGGAAAGGTGACGACAGTCAAAAATCGAATTCTATCTTAGGAGGATACGAATCAAATGAAGATTACACCTACGTGCGTGGAAGAGGTAGAGGACGTTATGTATGTGACCAATGTGGAATACGTTGTAAGAAACCTTCCATGCTGAAAAAACATATAAGAACTCATACCAATGATAGACCTTTTACCTGTAGTCATTGTAATTTTAGttttaaaactAAGGGAAATCTCACAAAACATATGAAAAGTAAAGCGCATACCAAAAATTATGCAGCAAGTAGCAGTTCTAGTAGTAGTTCTTCCGCCCAACAAAGTGGAACTCAGAGTTCCGATTCGGATACAGATGATAGTGGTATGGATAGCAGTGatgAGTCAACAAGGCAACAAGAACATGAAGCAGCATACGGTTTATTATCCTTATCACAAAAAACAACCCAAAATGCGTCATTAAATTCCCAAACAGATACTTTCTCGACAAATACAAGCCCCGTGTGTTCCTTAGGAATAAATCCCCGAGACAGTCCGGTTAGTTTCATGAACACGGAACAAGTAACTCAAGTTAACAATACGAAttttgctaaaaataaaatattggatcatcaaataacattaaattttaataaaataattgaaacacCTTCAACTAGTATGGATTCAGATTCAAAGGAAACGCAgaatttattacagtttttaggaaaaacaaatacaaatcgACCGTTAACTTATCCTTATACATCGGATATGGTTGATGATATAAAAGATAATGAAATGGTTAGTCCAGGTCATCCGTATGAAAATATAGAAAGTAAAGTTGAACAAAGGTTAAATATTACACAAAAACATCATGAAATTGCCTTGGAAACGCAAAGAATAATTCCAATTACTATTAGTTATGATCCTAATTATTTAAAACGGTATGAGGTTCAAGAAGAAACAGTTCCTGCCCCAAAAATACAACAACAAACTCCTATGGTTAAAATTAACGATCGGGTTGTTCTTAATAATGTCCCTTACAGTAATAGTTCGAATCAGGGCGATGTAAGAAAACGTAAAGTGCAAGAAGTGGAAAATTCTTCAAGCGCAAAGTTACATAGAATGAATTCCGAACCCGAAGCTATGGATTTATCCATGCCAACTTTAGAAGAAAAAACAAGTTCTGAAACAAGTTTAAGATACAACGGTTCTTCCCCTACTAAAGAAACAGAATTACGAATAGGGAATTTACATATAGGGGAAACCCGAATCCTTCCTCATCCTGATACAGTTGTACGAAACcgaaattttgataaaacaaacTTCCCTGATACTagttcaaataattataaacaaaacgGAGCACCATTTGAATTAAACGAATATAATCGAGAAAATGAAAATGTGATCAATTTAAAAACTTCTCCTCAAAATTCAGAAGGTGACCAAAtcaatattaattatgtaatacaAGAAAATCATCCCCCGAATATTATAACAACTTTTACTGAAGTACCAAATAGTTTTTCTCCGATGGATTATGATAATAGTGCCATGGAAACGTTAGCGGATGTAGCAACAAAACAAGTGaagttagaaaaaaatactttagcTAAAAGTGTAGCTTCAGAATATTTAAAACTAGCTACGAAACAAGAATTCCAAACAAACGAAGGAGGTATACGAGAACCGAATAATTTTGTAGCTGCAACTAAAGAGGTCAACGAATTAATTGTAAAGccggaagaaaataaaagttgtactATTTGTGCTAAAAATTTTAGCAAACCCTCGCAGTTAAGgttACACATGAACATCCACTACCTGGAACGACCTTTCCGTTGCGATCCATGTTCAGTTAGCTTTAGAACCAAAGGGCATTTACAAAAACATGAAAGAAGTGCTAGTCATCATAATAAGttatcATCATCTCCTTTATTATCTTCTTCTGAACCACGACCTTTTAAGTGCTCGGACTGCAACATAGCTTTCAGAATACATGGTCATTTAGCTAAACATCTGCGTTCTAAAATGCACATCATGAAGCTGGAGTGCCTCGCCAAGATCCCATTTGGCTTATATGCTGAGCTTGAAAGAGCCAACAGCCTCCTTACTGAAATAAACACCACTGATGGGGACCAATGCTTGGAAAGTTTAAAGGCTCTAGCTAAGAAGGTTTTTATAAATGATCCGAACAAACTAAATCAGCTAGAAGTATCATTAAGCAGTACAGACGCATCAGATAGTTAA
- Protein Sequence
- MERSADRYLHKKFKKQLSIEPNQNDEKIAKTTENRCVLDEGGKNSIVTNNAVTVKTSERNSNESVPKVSTNNENTFNKVTVLESSSNLDKSSISHLNLVSVEKGESNVNVVNERSFKQAGELVDPQSSSNSCISYVISKSSRVENLNQPETHYRAANFDTTRFNVSEPIATIPSADTSSILDNVYSKQYVTSKLVNIDKVGDISSSNSSLGNNDHHQDDSCNLVATESKPEHNTPEHVEKSSGGKYICSYCNLACSKPSVLQKHIRAHTNERPYPCVSCGFSFKTRSNLYKHCRSRTHANRVMGNKAQEIHNETDTDSQNKMEYIEQNSVESGGEDVVVATREEKGPIVQDIKTKPYKPRFHTAKAFFDDTTKDNQKDGEDQKVPETVQNRPSNSDLLSLHINEVINKNNAIVNSNEPYLLRKRSVDNSLADNINNNDVIYHPQTPQILVVDDKNDEPLNLTNKSRKRCLSEVGEPTMHTSLIKELLLKNLYADSMQCPHCKMIFQTVTELELHKMRSCKGYQKQGARYSRSSSVNVASILTKNKNAFDNIPHLQNTMFPLKSPGPFLGKTRLVESDKNKSFSFDDGLPTFQNPSDILRTTLRYSISPLTIQHDKPKKHPVKLFGGEVKITHTSGETKSFKIDSKDNGEQYDYGGRLSENRVVKSSLQSGGTVLQNKPNYNPKQDSLRSSPDVIRVYDNTTLSPSIDIANLEKTKFNFDRHQNHELEGELKSNSDLLVRPSCDVIGSSNFNNTALYKYTNIMDFSQKAVKLLAPNLKQPNLTIPGVPMPNKIVLPRSPSLTFEIKPDTPKIFDPLPISRTDDRMNVINLPKTQEPEIKHMENIQFAQKQIMLQQKMDPTPPSPTPCNPLNLLVNGKVVRYVPGMPGPIAAEAHSDVPYRSNFRPQKSNLRINFPETPSPMETQPSPIERTLDPMVPYHPNHQKFPDSKPPKSTEMKSPAPKNEMKSPNHSAASSELPRKFARPNTLALKPSIAAHKQHHGLTPTMFNQILISPDTPRVAKKYMQHFLHGNYFSYLGLKSSTKSVYCTLNKTQPSYVPHFKKLSMYSEWRQQDNKADKLYVSGYDSRQRQQKYATAGKAAVDLVVHSSYKFIVTESSSGKGDDSQKSNSILGGYESNEDYTYVRGRGRGRYVCDQCGIRCKKPSMLKKHIRTHTNDRPFTCSHCNFSFKTKGNLTKHMKSKAHTKNYAASSSSSSSSSAQQSGTQSSDSDTDDSGMDSSDESTRQQEHEAAYGLLSLSQKTTQNASLNSQTDTFSTNTSPVCSLGINPRDSPVSFMNTEQVTQVNNTNFAKNKILDHQITLNFNKIIETPSTSMDSDSKETQNLLQFLGKTNTNRPLTYPYTSDMVDDIKDNEMVSPGHPYENIESKVEQRLNITQKHHEIALETQRIIPITISYDPNYLKRYEVQEETVPAPKIQQQTPMVKINDRVVLNNVPYSNSSNQGDVRKRKVQEVENSSSAKLHRMNSEPEAMDLSMPTLEEKTSSETSLRYNGSSPTKETELRIGNLHIGETRILPHPDTVVRNRNFDKTNFPDTSSNNYKQNGAPFELNEYNRENENVINLKTSPQNSEGDQININYVIQENHPPNIITTFTEVPNSFSPMDYDNSAMETLADVATKQVKLEKNTLAKSVASEYLKLATKQEFQTNEGGIREPNNFVAATKEVNELIVKPEENKSCTICAKNFSKPSQLRLHMNIHYLERPFRCDPCSVSFRTKGHLQKHERSASHHNKLSSSPLLSSSEPRPFKCSDCNIAFRIHGHLAKHLRSKMHIMKLECLAKIPFGLYAELERANSLLTEINTTDGDQCLESLKALAKKVFINDPNKLNQLEVSLSSTDASDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00399955;
- 90% Identity
- -
- 80% Identity
- -