Hnig029433.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hemicrepidius niger
Gene Symbol
ZNF236
Assembly
GCA_963082805.1
Location
OY720166.1:10544207-10556605[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.001 0.1 14.2 0.8 1 23 169 191 169 191 0.97
2 25 0.0013 0.13 13.9 0.5 1 23 197 219 197 219 0.98
3 25 7.1e-05 0.0071 17.9 0.1 2 23 225 246 225 246 0.97
4 25 0.045 4.5 9.0 0.1 1 23 252 274 252 274 0.97
5 25 2.3 2.3e+02 3.7 4.6 2 23 287 308 286 308 0.94
6 25 3.4e-05 0.0034 18.9 2.7 1 23 333 355 333 355 0.99
7 25 4.7e-05 0.0047 18.4 1.7 1 23 361 383 361 383 0.98
8 25 0.0017 0.17 13.5 4.1 1 23 389 412 389 412 0.96
9 25 0.0015 0.15 13.7 2.5 1 23 422 445 422 445 0.97
10 25 0.00014 0.014 16.9 1.7 1 23 529 551 529 551 0.96
11 25 0.0044 0.44 12.2 4.8 1 23 557 579 557 579 0.98
12 25 0.00068 0.068 14.8 1.4 1 23 585 607 585 607 0.98
13 25 0.047 4.7 9.0 0.9 1 23 614 636 614 636 0.95
14 25 0.0014 0.14 13.8 5.5 1 23 689 711 689 711 0.98
15 25 0.00011 0.011 17.3 2.0 1 23 717 739 717 739 0.97
16 25 2.5e-05 0.0025 19.3 0.7 1 23 745 767 745 767 0.98
17 25 0.0055 0.54 11.9 3.8 1 23 773 795 773 795 0.98
18 25 0.051 5.1 8.9 0.5 1 23 1286 1308 1286 1308 0.97
19 25 6.7e-06 0.00067 21.1 4.2 2 23 1319 1340 1319 1340 0.98
20 25 2.3e-05 0.0023 19.4 1.9 3 23 1348 1368 1346 1368 0.98
21 25 0.00018 0.018 16.6 0.6 1 23 1376 1398 1376 1398 0.97
22 25 0.001 0.1 14.2 3.3 1 23 1404 1426 1404 1426 0.98
23 25 1.7e-06 0.00017 23.0 2.6 1 23 1581 1603 1581 1603 0.98
24 25 0.0059 0.59 11.8 1.1 1 23 1609 1631 1609 1631 0.98
25 25 0.0017 0.17 13.5 3.9 1 22 1637 1658 1637 1658 0.96

Sequence Information

Coding Sequence
ATGAAGGCAACACTACAACCTATGACAAGCAGCCAGAACGAAGTTTATACTTACGTTGTCCTTCCTCTTGAAGCATTTCAACAAACTTCAGATCACAGTGTACAATCCTTAACCGTAGCCCAAAATGTTATTCTTAAAGCTCTCCCGGATGGAAAAGTTACTCAACAAATACAACCTATTACTGTGCCTGAGAATGTTATATTTAGAACATTGTCAAAAGGCAGGAAGAAAAGTTTAACAGATCAAATTTCCGATAACGTCACTATGTTGGTAAAGCCAGTGGAAAGAGAAAAGCAAATTCTTTCGAATTCTCGAGAGCTATCGGTCATTCAAGAAGATAATAGTGGTCGTAGCAATATTGTAAGAAAATCAGTAATTTTTAAATCAGCAGTAAATAAACCTGAAACTTTGTCAGGTAACTCTGACGTCCGTTATTTAAAATGCAAGTCTTCTCAATTTAACAATACAAACTATACCAGAATAAAAGAATCCCAAAATGGTTCGTTCAAGTGTACTATTTGTGATCAAGTCTTTAACAAAATGATGCTTTATCGAACACACATGGAAGCACATAGAAAtgctaaaaaatataaatgtactCAATGTTCAGCAAGTTACAATGTCGAAGATAATTTTAAACTGCATATGGCAATGCATATAAAAGGTGAACCTGTTTGTCCCATTTGTAATAGAAAATTTCAAAGGTTGGCTAGTTTAAAAGCGCATATTATAATACATGAAGTTGATGAAATATTTATGTGTGTAGAATGCCTTGCTGAGTATGACAAAGAGGATGACCTGAATAAGCACATGGAGAGTCATAAAAAGGAAAAGATAGAAGATACTGTACAAACATTAGAATGTTCATTTTGTGGTCATACATTTCAAGAAACCCATAAGTACAAAGAACATATTTCTTTTCATATTAAGATGAGGAGGATGGTGATGAACAGCAAAAAACATAAACGACGAGTAAATACAAATAATGAATATCCGTATAAATGTGAAGTGTGTAGAAAGTCATTTGCTAAATATTGTTTGTTAGAAAGGCACATCAGAATACATAGTGGTGAAAAGCCGTTTAGTTGCCATTTATGTAATCGAGCCTTTAATCAAAAAGGGACCTTACAAATTCACCTTGCTCGACATTCTGGAATTAAACCGTTCCATTGCACTCTTTGTCCGGCCAAGTTTTGCCAGAAAGGTAATCTGAGAGTTCATGTACAAAAGACACATATTGCGCCAAGTCCAGGTGAAAAAGTATACAAATGTACAATGTGTActtgcatttttaaaaaagtctCGTCTTTAAATGCACATATTACCCGAGTACATGCAGGGGAAAAACAAGACGATGAGATAGCAGATGTCTTGGAACAATTAAAGCAGTTAAAAAAACGTTTAGAAGTAAACAATGAAGAAGAAAACACTGAATCTAGTAACATAGCTTCAGTCGTTATAAAAGAAACTGTACCCCAACTGGAAAATAATGCCGTTAAGTATGTACGGTTAGTGGATACCAGTGTTGAAGGATCAATTCGAAGATTTTTAGTTAAGCAGAGGAAAGTAGGTGATTATCAGTGGTATATTTGTTCATGTTgttcaaaagaatttaaaaaaccttcAGATTTAATCAGACATATTAGAGTTCATACTAAGGAAAAGCCATATAagTGTACATGTTGCAATCAGGCTTTTTCTTTAAAATCGACGCTAACAACTCATATGACAACACACATTGGAAAACGCCAACACCAGTGTGTTCTTTGTTTAAAAGCTTTTACATCTGTCCGATCATTAAATGCACATCTCAGGAGGCACGAAAAACGTTTGCAGCACTATATGTGTAGCACTTGTAATACAGCATTCAGTACAATTACGAAAGCAAAACTGCACATGGAATTTCATAAAACTGATCCATTAAATAATGGTCTTAACAAATCTGGTGAATTACGGGTAGTAATGCAGCAACCTATGGTGGAAACCCCTGATGGTTTACTTCCAGTTGCAGCACCTAAGTCTCAAGTATGCTCAAATAGACTTGATTCGAATAATACTAGACCTCATAAGTGTCATTACTGCAGTGCAGCTTTTACGAAAGGAGTTCATCTTAAACGCCATATGTTAATACATTCTGGGGAAAGAAAATTCAAATGTAACATCTGTCTAAAATCATTCTATTCTTCATATGCCTTAAAAGAACATTTACAATTTCATAGTGGAGAAAGAAATTATAGCTGCAAAGTATGTGgcaaaaaatttgttacaaaTGCGATTTTAAAAagacatttaaaaatacataattcATCTACACCATATATTTGTCCCTACTGTAAAAAACGATTTAAAACCATTATGTTATGTCGTAGACATATTAAAATTCACAAAAGAGATTTTTCTATGCAGattcATGCACTCAGTGAAACTGGAGAACTTGGAAGTCTTGAAGATACTAGTGCAACCTCTTCATTTGATTTAAATGATACCTTGTCAGTTAATCCATTTCCTACGACATTGGTGGATGCAACATCTAATGTAGACTTAACATTACAAAATTTATCCTCTAATATAGAAATACCAACTGTACTCAGCTTGGATGAAACTTCATCCTCATTATCTACGATGCGAACACCAGATACTAAGgaattacaacaaaataaagataatagtattgcaaaaatattatattctgatGAAAATGGAGTTATCATATCTGCCAATCTGGAAACTAATTCACagGATGGTGAATCTGAATTACAAAACGTCCTTGGTCAAACATTTTTTCAAGCAACCACTAGTCCACAAAATTTCATGGATAGAACAAATTTAGCGTTGTTATCGGAAACTCCAACAGCAAACGAGCTGGAAAATGTTGAAGATGCAGCGACTACTCTTGCAGAAGAAAATATAGATGCGCAAGAATCTGCAGGTGGTCCTACAGTTTACATTAATTGCGAAGATTTACAAGTTTTTACCACAGCCAGTTTGTATAATGCCTGCCTTGCACAATTAAAACATAACGATCCGTTATTGATGACTGGAATAAACGAAATTCAAgatccaaatattttattttcaacagaTTCTACGTTAAATCAACTAACTGATACACAGTTAGATCCGCAAGCGTTTGAGATGTTAATGCCAACGTTTACCTTGTACAATAATATGGCTGTATCCACCAACAATTCTTTAAGTGGCTTAAATACTTCCTTTCCAAACATAATACTATCTAATAATATTGAAGATTGTAGTGACACAAATCAAgaagtaaatgaaataaatagaAAGGGTGAAGCTAATTTATTAAACATCAATATGGTGTCTAGTACCAAATCATCTGCAAGTACTGATGTTGAGAGTGTGGAGTTAATGCCAAATACTATGGTTTCACAAAGTAGCTCCTTAACGGGTGTTAATCAGGAAAATGTACTTTTATCAAGTTTACTATACACAGATGCAAATCAGTTAGATGCTACAGACTCTGCCAAAGTTTGTTTAGATGTCACTACCGGTACCTGTGAAGATTCCATAACTGAACTTCGAACTCCAGCAAGTAGTGTATATAAAAAAGTGGATTTTGCATGTTCATACTGCAAAGTCACACTGAAATGCATAGCAGATTTGAAAATGCATAAAtgtattgaaaaaattaatttgttaaaaagaaaaagaagaaccAACATTCACGCTAGTACAGGTAAACAAAAGACAGTAATTAATGTGGCAGAAACTGATATGACAAAGAGCATTTCTTTATTAAAGTCAAAAAATATCACCGAAcCAGAACGTTATGAAAATGAAGAAGCAGTTTCAAATTCCTCTGTCGTTTATACATCTGAACCAAATATTCAGTATAAATGTATTCATTGTGATAAGATTTTAGCTACCAAAAATGCTTATGCACGACATGTACTAATACACAAAGATAAGCAAGGGGACCGTACAAATAATACATGTTCATATTGTAGTAAAGTATTTAAGAAACATTCTGATTTGGAAAGACATTTACGAACCCACACTGGAGAAAAACCATTTGGCTGTGATAAGTGTGACAAACGTTTCTCTCTCAAATCTACACTGGAGACCCATTATCGAACGCACAATCCTGGTGGtaacaaagattttaattgtGCTGTTTGTAATTCTTACTTTAGTTCAAAATCAAGTCTTAGAGTACATATGCTAGTACACACAGGAGTCAAGCCGTATCAATGTTCTTTGTGTTCTGAAAAATTTCGTACATCGGGCCACAGAAAATCTCATATGGCTtctcatttgaaaaatattgattCGAAGAAGACTTCACAGTCTAAAGCTGCAAAATTGAACAACCTTTTCGCATCGGTAAAAATGGATACACAAAATACTGGTCAAGAGGCTCAAGGAAATGTAACTACTATATTAAATACACAATCACCAACAGACGGCAATGCGGAAAGCTCACAGTTATTAATGCATGAAGCAGATGCGTTATATCCTAATCAAACTATTCAAGTAGATCCAATTTTCCTACAACATCTACAGCTAAATAATGTACTTTTACAAGATAACACAGAAGATTTAGCCTTTATTCAAGTAGATCCCAGTGATGTTCAAATAATGAATATGAAGTCTTTGCTGAACAATGGTGATATAAATAACTTTGATGAAGCACTGTATGAAACAGTAGTCACAGAAAAAACGAAACCTCAAggttcattaaattttacaaagaaAGTTATTCCTAAAACCAAAGAATTTGTCTGTAACGTGTGTGATAAAAAATATAGTACGAAAtctacattaaaaaaacatacaaaaatcCATAGCACTGCAAACTTATTCAAATGTACAAAATGTATTACTGCATTTGAttctacagaaaatttaaataatcatttaaaattacatactGGGTATCGGCCATATTGTTGTCAACTTTGTACCAACACTTTCagccaagaaaaaaatttgaaaactcaCATGAGAAggtaa
Protein Sequence
MKATLQPMTSSQNEVYTYVVLPLEAFQQTSDHSVQSLTVAQNVILKALPDGKVTQQIQPITVPENVIFRTLSKGRKKSLTDQISDNVTMLVKPVEREKQILSNSRELSVIQEDNSGRSNIVRKSVIFKSAVNKPETLSGNSDVRYLKCKSSQFNNTNYTRIKESQNGSFKCTICDQVFNKMMLYRTHMEAHRNAKKYKCTQCSASYNVEDNFKLHMAMHIKGEPVCPICNRKFQRLASLKAHIIIHEVDEIFMCVECLAEYDKEDDLNKHMESHKKEKIEDTVQTLECSFCGHTFQETHKYKEHISFHIKMRRMVMNSKKHKRRVNTNNEYPYKCEVCRKSFAKYCLLERHIRIHSGEKPFSCHLCNRAFNQKGTLQIHLARHSGIKPFHCTLCPAKFCQKGNLRVHVQKTHIAPSPGEKVYKCTMCTCIFKKVSSLNAHITRVHAGEKQDDEIADVLEQLKQLKKRLEVNNEEENTESSNIASVVIKETVPQLENNAVKYVRLVDTSVEGSIRRFLVKQRKVGDYQWYICSCCSKEFKKPSDLIRHIRVHTKEKPYKCTCCNQAFSLKSTLTTHMTTHIGKRQHQCVLCLKAFTSVRSLNAHLRRHEKRLQHYMCSTCNTAFSTITKAKLHMEFHKTDPLNNGLNKSGELRVVMQQPMVETPDGLLPVAAPKSQVCSNRLDSNNTRPHKCHYCSAAFTKGVHLKRHMLIHSGERKFKCNICLKSFYSSYALKEHLQFHSGERNYSCKVCGKKFVTNAILKRHLKIHNSSTPYICPYCKKRFKTIMLCRRHIKIHKRDFSMQIHALSETGELGSLEDTSATSSFDLNDTLSVNPFPTTLVDATSNVDLTLQNLSSNIEIPTVLSLDETSSSLSTMRTPDTKELQQNKDNSIAKILYSDENGVIISANLETNSQDGESELQNVLGQTFFQATTSPQNFMDRTNLALLSETPTANELENVEDAATTLAEENIDAQESAGGPTVYINCEDLQVFTTASLYNACLAQLKHNDPLLMTGINEIQDPNILFSTDSTLNQLTDTQLDPQAFEMLMPTFTLYNNMAVSTNNSLSGLNTSFPNIILSNNIEDCSDTNQEVNEINRKGEANLLNINMVSSTKSSASTDVESVELMPNTMVSQSSSLTGVNQENVLLSSLLYTDANQLDATDSAKVCLDVTTGTCEDSITELRTPASSVYKKVDFACSYCKVTLKCIADLKMHKCIEKINLLKRKRRTNIHASTGKQKTVINVAETDMTKSISLLKSKNITEPERYENEEAVSNSSVVYTSEPNIQYKCIHCDKILATKNAYARHVLIHKDKQGDRTNNTCSYCSKVFKKHSDLERHLRTHTGEKPFGCDKCDKRFSLKSTLETHYRTHNPGGNKDFNCAVCNSYFSSKSSLRVHMLVHTGVKPYQCSLCSEKFRTSGHRKSHMASHLKNIDSKKTSQSKAAKLNNLFASVKMDTQNTGQEAQGNVTTILNTQSPTDGNAESSQLLMHEADALYPNQTIQVDPIFLQHLQLNNVLLQDNTEDLAFIQVDPSDVQIMNMKSLLNNGDINNFDEALYETVVTEKTKPQGSLNFTKKVIPKTKEFVCNVCDKKYSTKSTLKKHTKIHSTANLFKCTKCITAFDSTENLNNHLKLHTGYRPYCCQLCTNTFSQEKNLKTHMRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-