Basic Information

Insect: Hemicrepidius niger
Gene Symbol: -
Assembly: GCA_963082805.1
Location: OY720162.1:27095987-27107008[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 7.5e-05 0.0075 17.8 1.5 3 23 61 81 59 81 0.96

2 31 0.0016 0.16 13.6 1.1 1 23 86 109 86 109 0.95

3 31 5e-05 0.005 18.3 2.3 1 23 115 137 115 137 0.99

4 31 0.015 1.5 10.5 2.5 1 23 143 166 143 166 0.95

5 31 4.2e-06 0.00042 21.7 4.6 1 23 171 193 171 193 0.98

6 31 0.0026 0.26 12.9 1.7 1 23 202 224 202 224 0.99

7 31 1.4e-05 0.0014 20.1 0.3 1 23 230 252 230 252 0.97

8 31 1.8e-05 0.0018 19.7 0.8 1 23 258 280 258 280 0.98

9 31 2.4e-07 2.4e-05 25.6 2.1 1 23 286 308 286 308 0.99

10 31 0.38 38 6.1 3.1 1 23 430 452 430 452 0.89

11 31 0.00023 0.023 16.2 1.7 1 23 458 480 458 480 0.98

12 31 0.00027 0.027 16.0 2.4 1 23 486 508 486 508 0.98

13 31 9.1e-05 0.0091 17.5 4.0 1 23 515 537 515 537 0.97

14 31 6.2e-07 6.2e-05 24.3 0.6 1 23 542 565 542 565 0.97

15 31 0.15 14 7.4 2.0 1 23 569 591 569 591 0.98

16 31 0.00015 0.015 16.8 4.1 1 23 600 623 600 623 0.95

17 31 0.0044 0.44 12.2 0.5 3 23 634 654 632 654 0.95

18 31 0.00023 0.023 16.3 4.1 1 23 660 682 660 682 0.98

19 31 8.2e-06 0.00082 20.8 1.2 1 23 688 710 688 710 0.97

20 31 0.0017 0.17 13.5 1.4 1 23 716 739 716 739 0.93

21 31 0.02 2 10.2 2.1 1 23 975 997 975 997 0.89

22 31 8e-05 0.008 17.7 2.5 1 23 1003 1025 1003 1025 0.98

23 31 6.5e-05 0.0065 18.0 4.3 1 23 1031 1053 1031 1053 0.98

24 31 0.0025 0.25 13.0 3.4 2 23 1061 1082 1060 1082 0.96

25 31 1.7e-07 1.7e-05 26.1 0.8 1 23 1087 1110 1087 1110 0.97

26 31 0.023 2.3 10.0 1.5 1 23 1114 1136 1114 1136 0.98

27 31 0.00015 0.015 16.8 4.1 1 23 1145 1168 1145 1168 0.95

28 31 0.0044 0.44 12.2 0.5 3 23 1179 1199 1177 1199 0.95

29 31 0.0005 0.05 15.2 3.8 1 23 1205 1227 1205 1227 0.98

30 31 2.2e-06 0.00022 22.6 2.0 1 23 1233 1255 1233 1255 0.97

31 31 0.0052 0.52 12.0 2.6 1 23 1261 1284 1261 1284 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	7.5e-05	0.0075	17.8	1.5	3	23	61	81	59	81	0.96
2	31	0.0016	0.16	13.6	1.1	1	23	86	109	86	109	0.95
3	31	5e-05	0.005	18.3	2.3	1	23	115	137	115	137	0.99
4	31	0.015	1.5	10.5	2.5	1	23	143	166	143	166	0.95
5	31	4.2e-06	0.00042	21.7	4.6	1	23	171	193	171	193	0.98
6	31	0.0026	0.26	12.9	1.7	1	23	202	224	202	224	0.99
7	31	1.4e-05	0.0014	20.1	0.3	1	23	230	252	230	252	0.97
8	31	1.8e-05	0.0018	19.7	0.8	1	23	258	280	258	280	0.98
9	31	2.4e-07	2.4e-05	25.6	2.1	1	23	286	308	286	308	0.99
10	31	0.38	38	6.1	3.1	1	23	430	452	430	452	0.89
11	31	0.00023	0.023	16.2	1.7	1	23	458	480	458	480	0.98
12	31	0.00027	0.027	16.0	2.4	1	23	486	508	486	508	0.98
13	31	9.1e-05	0.0091	17.5	4.0	1	23	515	537	515	537	0.97
14	31	6.2e-07	6.2e-05	24.3	0.6	1	23	542	565	542	565	0.97
15	31	0.15	14	7.4	2.0	1	23	569	591	569	591	0.98
16	31	0.00015	0.015	16.8	4.1	1	23	600	623	600	623	0.95
17	31	0.0044	0.44	12.2	0.5	3	23	634	654	632	654	0.95
18	31	0.00023	0.023	16.3	4.1	1	23	660	682	660	682	0.98
19	31	8.2e-06	0.00082	20.8	1.2	1	23	688	710	688	710	0.97
20	31	0.0017	0.17	13.5	1.4	1	23	716	739	716	739	0.93
21	31	0.02	2	10.2	2.1	1	23	975	997	975	997	0.89
22	31	8e-05	0.008	17.7	2.5	1	23	1003	1025	1003	1025	0.98
23	31	6.5e-05	0.0065	18.0	4.3	1	23	1031	1053	1031	1053	0.98
24	31	0.0025	0.25	13.0	3.4	2	23	1061	1082	1060	1082	0.96
25	31	1.7e-07	1.7e-05	26.1	0.8	1	23	1087	1110	1087	1110	0.97
26	31	0.023	2.3	10.0	1.5	1	23	1114	1136	1114	1136	0.98
27	31	0.00015	0.015	16.8	4.1	1	23	1145	1168	1145	1168	0.95
28	31	0.0044	0.44	12.2	0.5	3	23	1179	1199	1177	1199	0.95
29	31	0.0005	0.05	15.2	3.8	1	23	1205	1227	1205	1227	0.98
30	31	2.2e-06	0.00022	22.6	2.0	1	23	1233	1255	1233	1255	0.97
31	31	0.0052	0.52	12.0	2.6	1	23	1261	1284	1261	1284	0.93

Sequence Information

Coding Sequence: ATGCCTTTCCGATGCTTTCGTGCTTTTGAGGGGATATTTAGTGAAAGCGATTTTATGACTTACATTACATTCTATTGTGATACTGATAATATTATatttGGTCCTAAGAGTAGCATTCTAATTAAACGAAACAAAAAGAAAGGTATCAATGGTTTGAAGACTTCAAACAATCCAATAAACTGCGACCAATGCGATAAAATGTTCGATACCATTAGACAATACAAAAAACACATGCGTAACCATGCCGATAGAAAATATCCATGCGATCTTTGTAGTAAAAAATTTAGATTTCCTTATCAAGTACGAGCGCACAAAAAAGGGACCCATACTAAAGAACCAGCCTACACCTGTGATATTTGCAGTAAAAGTTTTGTAATGAATCATGCACTGACAACGCATAAAATGACTCACTTTAAAGATTATAGATTTAAGTGCGATAAGTGTGATAGTGGTTTCTATCATCAGAATGTTCTTCAACGGCATTACGATATACAACACAGAGGTGTTCGTTTTAAATGCGAACATTGTGACAAGTCATTTAGGGATGAGTATTATTACAAGAGACATATTTTATCGCATAGTCCAACTTACGTTAAGAAGGAATACCAATGTGCTGTCTGCGATAAAGTGATGCAACATCGTAGTACATATCGCAATCACATGATAATGCACGGTGGAGGAAATCAACACATTTGCGATGTCTGTGGTAAATCAGTTACCACAGCGCAAAGTTTGAGGGACCATATGATGGTACATTCCGGCGAAAAGCCATTCGTATGTGACAGTTGTGGAAAGCGATTTATTAGTAAGAAGCTGTTGGTTACTCATGAACGCACTCATACTAAGGAAAAACCTTACACATGCAAGTTGTGTGACAAAAGCTTCACCCAACGTGGCACACTAACAATACATATGCGTTACCATACAGGAGAACGACCatccaTAACCATTCAACATCCGTTACTGATTCTTCCTCTACAACATCCAACCACTGTTATATCGAACAAGAGCGTTGTTCCACTGCAATTCGTTGTTAAACGTGAATCAAACACCATTGACGAAGTCGCTATCAATGCTAGTACTAGTAAACCAAGCTCTGCCTGTGCAGTATTTTTATTCAAAGCTGATCCATATCTTGAAGTTAAAAACGAATCTCAGAGTAACGTGACCACCGATACAATATTAGTTGATACTAAACGAGCAACCTCGCAGTTTTCAATTACGACCAACAACATTTCAAGGAATAATTCAGAACCAGATTCATCTGAACCATCACAGTCGACGCCATTCTCTTGCGAATTTTGCAGAaagcattttaaaatatctagttACTTAGCTCACGTGCGAAAAGTACatccaactttaaaaaaatttacttgcAATTTGTGCCAAGAGGTTTTTGAAAAGAAGGATCTATATTTCAACCATCTACGCTCTCATAGCGCGGCTAAACCCCACACTTGCGAAATATGTTCCAAACCCTTCATTTATAGCCATCAAGCTAAGGCACATATGCTAACGCATTCCAAAGAAAGACCAACGCATAAATGTGAATTATGTGAAAAGACCTTTACGTCAAAGAGTGGGTTTACAACGCACCAGTTACAACATGCGAACCGTTCTTATAAGTGTACAATTTGCGGTAAAACGTTTGTGTATCAAAGTGTGTTGAATAAACACATTAATAAcgttcatataaaaaaatttcaatgcgAGGTATGCAGGGAGAAATTTCAAGCCTTTGGAACTTACACCAGACACAAACAGTCTCACAAAACAAATGTTCCACATAAAAACTTTGTCTGTCCAATCTGTGGAAAACGTTTTGATTTGCGATGCCATTTAAAGAAGCATACCATGTTAACCCACAACCGAGACGCAGACATGAACTATCACTTGTGCGATATATGTGGAAAAGTGTTAACAAGCGGAGAGGGTCTCCGGAAGCACAAGGTGACGCATGTAGACGAAAAATCGTTTCAATGCCACACCTGTGGAAAAGGATTCAGGGCAAAAAGACATTTGGCGATTCACTCGCAAACACACACTGGAACAAGAAATCATTCTTGCACGATATGTGGAAAGAAATTTACTCAAAGGACGCCATTGGTCATCCACATGAGAGGTCATACTGGCGAAAGACCGTATAAGTGTGATTTATGTGAAGAAGGTTTTGTTAGTCGATCTTTATTGAATACTCATAAAGCACATAAACACAAACTAGTTCAattcatAACCATTCAACAGCCACTACTGTTTCTTACTCTACAACATCCAACATGTGGTGCACCGGACAAGAAAGTTATTGCActgcaattaattataaaacctgAACCAAGTCCCATTGATGGAGTAGATCTCAATACTGGTACTATTAAACCAAAATCTGCCTGTGAAGTGTCTTTCTTCAAAACTGAACCATGTCCCGACATTGTTAAAATCGAATCTCAGAACAACGACTTCCCCAATATGGCATTGAATCTGACTAAGGAAGTAATCCCAAAATTTACTGCAATTAAATCCCAAGAAACCCTTACGAATAAATTGCAACtaaatttaactaaaatattaaaatcccTAACCATTCAACAGCCGTTACTGTTTCTTACTCTACAACATCCAACTACTGTTATATCGAACAAGAGCGTTGTTGCACTGCAATTCATTCTCAAACCTGAATCAAGCACCATCGGTAAAGTCGCTATCAATGCTAGTACTATTAAACCAAGCTCTCCCTGTGAAGTATCTTTATTCAAAACCGATCCATATCTTGAAGTTAAAAACGAATCTGAGAATAACGTGACCACCGACACAATATTGGCTGATACTAAACGAGCAACCTCGCAGATTTCAATTACGACCAACAACATTTCAAGGAATAATTCAGAACCAGATTCATCTGAACCATCACAGTCGACGCCATTCTCTTGCGAATTTTGCGGAaagcattttaaaatatctagttACTTAGCTCACGTGCGAAAAGTacatccaaatttaaaaaaatttacttgcAATTTGTGCCAAAAGGTTTTTGAAAAGAAGGATCTATATTTCAACCATCTACGCTCTCACAGCGCGGCTAAACCCCACACTTGCGAAATATGTTCCAAATCCTTCAATTATAGTCATCAAGTTAAGGCACATATGCTGACGCATTCCGAAGAAAGGCCAACGCAGAAATGTGAAGCATGTGAAAAGACCTTTACGTCAAAGAGTGGGTTTAAAATGCACCAGTTACACCATGCGAACCGTTCTTATAAGTGTACAATTTGCGGTAAAACGTTTGTGTATCAAAGTTTGTTGAAAACACACATTAATAAcgttcatataaaaaaatttcaatgcgAGGTATGCAAGGAGAAATTTCAAGCCTTGGCAACTTACAGGAGACACAAACAGTCTCACAAAACAAATGTTCCACATAAAAACTTTGTCTGTCCAATCTGTGGAAAACGTTTTGATTTGCGATGCCATTTAAAGAAGCATACCATGTTAACCCACAACCGAGACGCAGACATGAACTATCACTTGTGCGACATATGTGGAAAAGTGTTAACAAGCGGAGAGGGTCTCCGGAAGCACAAGGTGACGCATGTAGACGAGAAACCGTTTGAATGCCACACCTGTGGAAAAGGATTCAGGGCAAAAAGACATTTGGCGCTTCACTCGCAAACACATACTGGAACAAGAAATCATTCTTGCACGATATGTGGAAAGAAATTTACTCAAAGGACGACATTGGTCATCCACATGAGAGGTCATACTGGCGAAAGACCGTATAAGTGTGATTTATGTGAAAAAGGTTTTGTTAGTCGATGTTTATTGAATACTCATAAAGCGAATAAACACAAACTAGTGCAGTAa
Protein Sequence: MPFRCFRAFEGIFSESDFMTYITFYCDTDNIIFGPKSSILIKRNKKKGINGLKTSNNPINCDQCDKMFDTIRQYKKHMRNHADRKYPCDLCSKKFRFPYQVRAHKKGTHTKEPAYTCDICSKSFVMNHALTTHKMTHFKDYRFKCDKCDSGFYHQNVLQRHYDIQHRGVRFKCEHCDKSFRDEYYYKRHILSHSPTYVKKEYQCAVCDKVMQHRSTYRNHMIMHGGGNQHICDVCGKSVTTAQSLRDHMMVHSGEKPFVCDSCGKRFISKKLLVTHERTHTKEKPYTCKLCDKSFTQRGTLTIHMRYHTGERPSITIQHPLLILPLQHPTTVISNKSVVPLQFVVKRESNTIDEVAINASTSKPSSACAVFLFKADPYLEVKNESQSNVTTDTILVDTKRATSQFSITTNNISRNNSEPDSSEPSQSTPFSCEFCRKHFKISSYLAHVRKVHPTLKKFTCNLCQEVFEKKDLYFNHLRSHSAAKPHTCEICSKPFIYSHQAKAHMLTHSKERPTHKCELCEKTFTSKSGFTTHQLQHANRSYKCTICGKTFVYQSVLNKHINNVHIKKFQCEVCREKFQAFGTYTRHKQSHKTNVPHKNFVCPICGKRFDLRCHLKKHTMLTHNRDADMNYHLCDICGKVLTSGEGLRKHKVTHVDEKSFQCHTCGKGFRAKRHLAIHSQTHTGTRNHSCTICGKKFTQRTPLVIHMRGHTGERPYKCDLCEEGFVSRSLLNTHKAHKHKLVQFITIQQPLLFLTLQHPTCGAPDKKVIALQLIIKPEPSPIDGVDLNTGTIKPKSACEVSFFKTEPCPDIVKIESQNNDFPNMALNLTKEVIPKFTAIKSQETLTNKLQLNLTKILKSLTIQQPLLFLTLQHPTTVISNKSVVALQFILKPESSTIGKVAINASTIKPSSPCEVSLFKTDPYLEVKNESENNVTTDTILADTKRATSQISITTNNISRNNSEPDSSEPSQSTPFSCEFCGKHFKISSYLAHVRKVHPNLKKFTCNLCQKVFEKKDLYFNHLRSHSAAKPHTCEICSKSFNYSHQVKAHMLTHSEERPTQKCEACEKTFTSKSGFKMHQLHHANRSYKCTICGKTFVYQSLLKTHINNVHIKKFQCEVCKEKFQALATYRRHKQSHKTNVPHKNFVCPICGKRFDLRCHLKKHTMLTHNRDADMNYHLCDICGKVLTSGEGLRKHKVTHVDEKPFECHTCGKGFRAKRHLALHSQTHTGTRNHSCTICGKKFTQRTTLVIHMRGHTGERPYKCDLCEKGFVSRCLLNTHKANKHKLVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -