Basic Information

Insect: Hemicrepidius niger
Gene Symbol: -
Assembly: GCA_963082805.1
Location: OY720162.1:27256388-27262599[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 35 0.0014 0.14 13.8 4.9 1 23 136 158 136 158 0.97

2 35 0.00013 0.013 17.0 2.7 1 23 164 186 164 186 0.98

3 35 9.6e-05 0.0096 17.4 1.0 1 23 192 214 192 214 0.98

4 35 0.37 37 6.2 0.1 3 23 222 243 220 243 0.94

5 35 0.0002 0.02 16.5 4.3 3 23 254 274 252 274 0.96

6 35 0.0091 0.91 11.2 1.2 1 23 280 302 280 302 0.97

7 35 0.0053 0.53 12.0 1.5 1 23 308 331 308 331 0.96

8 35 3.7e-06 0.00037 21.9 1.5 1 23 336 358 336 358 0.99

9 35 5.2e-05 0.0052 18.3 2.9 1 23 368 390 368 390 0.99

10 35 9.9e-06 0.00099 20.5 0.0 1 23 397 419 397 419 0.98

11 35 0.0001 0.01 17.3 3.5 1 23 425 447 425 447 0.99

12 35 1.8e-06 0.00018 22.8 1.0 1 23 453 475 453 475 0.98

13 35 0.0042 0.42 12.3 0.3 1 23 481 504 481 504 0.97

14 35 0.0031 0.3 12.7 2.1 2 23 536 557 533 557 0.87

15 35 0.0041 0.41 12.3 5.4 1 21 563 583 563 585 0.91

16 35 0.0018 0.18 13.5 1.6 1 23 591 613 591 613 0.98

17 35 0.0043 0.43 12.3 0.5 2 23 620 642 619 642 0.95

18 35 7.1e-06 0.00071 21.0 0.2 1 23 647 669 647 669 0.98

19 35 0.00012 0.012 17.2 3.5 1 23 679 701 679 701 0.98

20 35 8.5e-05 0.0084 17.6 0.0 1 23 708 730 708 730 0.98

21 35 0.00025 0.025 16.1 5.2 2 21 737 756 736 758 0.95

22 35 3.5e-05 0.0035 18.8 0.2 1 23 764 786 764 786 0.99

23 35 0.00023 0.023 16.2 0.3 1 23 792 815 792 815 0.98

24 35 0.21 21 7.0 6.5 3 23 997 1017 996 1017 0.97

25 35 1e-05 0.001 20.5 1.0 1 23 1023 1045 1023 1045 0.98

26 35 0.00038 0.038 15.6 2.6 2 23 1093 1114 1093 1114 0.97

27 35 0.0076 0.76 11.5 0.7 1 23 1120 1143 1120 1143 0.94

28 35 0.0004 0.04 15.5 0.8 1 23 1151 1173 1151 1173 0.99

29 35 0.073 7.3 8.4 1.4 1 21 1178 1198 1178 1201 0.90

30 35 0.00089 0.089 14.4 7.4 1 23 1210 1232 1210 1232 0.98

31 35 8.1e-05 0.0081 17.7 1.4 3 23 1243 1263 1242 1263 0.99

32 35 3.8e-05 0.0037 18.7 0.9 1 23 1271 1293 1271 1293 0.98

33 35 0.0024 0.24 13.0 0.2 1 23 1299 1321 1299 1321 0.94

34 35 5.4e-05 0.0054 18.2 0.3 1 23 1327 1349 1327 1349 0.99

35 35 7.7e-06 0.00077 20.9 1.8 1 23 1355 1378 1355 1378 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	35	0.0014	0.14	13.8	4.9	1	23	136	158	136	158	0.97
2	35	0.00013	0.013	17.0	2.7	1	23	164	186	164	186	0.98
3	35	9.6e-05	0.0096	17.4	1.0	1	23	192	214	192	214	0.98
4	35	0.37	37	6.2	0.1	3	23	222	243	220	243	0.94
5	35	0.0002	0.02	16.5	4.3	3	23	254	274	252	274	0.96
6	35	0.0091	0.91	11.2	1.2	1	23	280	302	280	302	0.97
7	35	0.0053	0.53	12.0	1.5	1	23	308	331	308	331	0.96
8	35	3.7e-06	0.00037	21.9	1.5	1	23	336	358	336	358	0.99
9	35	5.2e-05	0.0052	18.3	2.9	1	23	368	390	368	390	0.99
10	35	9.9e-06	0.00099	20.5	0.0	1	23	397	419	397	419	0.98
11	35	0.0001	0.01	17.3	3.5	1	23	425	447	425	447	0.99
12	35	1.8e-06	0.00018	22.8	1.0	1	23	453	475	453	475	0.98
13	35	0.0042	0.42	12.3	0.3	1	23	481	504	481	504	0.97
14	35	0.0031	0.3	12.7	2.1	2	23	536	557	533	557	0.87
15	35	0.0041	0.41	12.3	5.4	1	21	563	583	563	585	0.91
16	35	0.0018	0.18	13.5	1.6	1	23	591	613	591	613	0.98
17	35	0.0043	0.43	12.3	0.5	2	23	620	642	619	642	0.95
18	35	7.1e-06	0.00071	21.0	0.2	1	23	647	669	647	669	0.98
19	35	0.00012	0.012	17.2	3.5	1	23	679	701	679	701	0.98
20	35	8.5e-05	0.0084	17.6	0.0	1	23	708	730	708	730	0.98
21	35	0.00025	0.025	16.1	5.2	2	21	737	756	736	758	0.95
22	35	3.5e-05	0.0035	18.8	0.2	1	23	764	786	764	786	0.99
23	35	0.00023	0.023	16.2	0.3	1	23	792	815	792	815	0.98
24	35	0.21	21	7.0	6.5	3	23	997	1017	996	1017	0.97
25	35	1e-05	0.001	20.5	1.0	1	23	1023	1045	1023	1045	0.98
26	35	0.00038	0.038	15.6	2.6	2	23	1093	1114	1093	1114	0.97
27	35	0.0076	0.76	11.5	0.7	1	23	1120	1143	1120	1143	0.94
28	35	0.0004	0.04	15.5	0.8	1	23	1151	1173	1151	1173	0.99
29	35	0.073	7.3	8.4	1.4	1	21	1178	1198	1178	1201	0.90
30	35	0.00089	0.089	14.4	7.4	1	23	1210	1232	1210	1232	0.98
31	35	8.1e-05	0.0081	17.7	1.4	3	23	1243	1263	1242	1263	0.99
32	35	3.8e-05	0.0037	18.7	0.9	1	23	1271	1293	1271	1293	0.98
33	35	0.0024	0.24	13.0	0.2	1	23	1299	1321	1299	1321	0.94
34	35	5.4e-05	0.0054	18.2	0.3	1	23	1327	1349	1327	1349	0.99
35	35	7.7e-06	0.00077	20.9	1.8	1	23	1355	1378	1355	1378	0.97

Sequence Information

Coding Sequence: atggCTACATCTGACGAAAACGTGGTTATTGCTTCTTTACTTGGCGAGGGGGCAGAGATGCAGGAAAAAccgaaaaagaagaaattttggGTCCATCCTATATGCAAAAAAAGAAGCACTAAGGGCAAATATcatacattatttcccaatttAATTGATGACACtattaaattttatcaatattttcgaATGACCCACGAACAATTTCTGGACCTTTTAGAAAAGCTTCAACTAGAAATAAATAGGCGTCGAGCTATAGAGCCAAAAGAACGATTAGCTGTATGTTTAAGGCAGGTATCTTTTTCCGAtactacttttttaaaatatcttaccGTTAACATCCATACATTTCTATTCCAATTATTTTATCTTACCTTCCGGTATGTACAAACCACTTACATGGAGCATCGTTGTCACCATTGTCCAAAAGTATTCCTAAGATTAAGCAAATTAAATGCCCATTTAATAATGCACAGCGATGAAAGGCCGTTTACATGTGATTCCTGTCCAAAAACGTTTAAAAGACGACAGGAATTCATTAATCACAAGAGACTTCATGAAAACTCGGATCTTTACAGTTGCGATATTTGCGCACtatcttttaaaagaaaattcaatcTGGATGTTCATCTTAAAAGACATtctaaaaattatacaattatCTGTGATGTTTGTAATGTTGGATTTTATTCCAATTGGGCATACAAGGGACATTATAGTTCAAGACATAGTACTGCAGTTCAAGATAAACCACACTTATGTAATCTTTGTCCAAAGAAGTTTAAGAAGCGACACGAACTTATCGCTCACCTCAGAAGTCACGAAAAGGTTAAAAAGTTTCAATGCGATATTTGTTCGAAGAAATTAACAACAGAACTTCAACTGCGGCTCCATAAAGATCGCCATCTTAAGAGGTACACGTTCTTTTGTGATACATGTGAAGGGggcttttataataaacaagaaTTACATAAGCATATACGTATAGATCACGAAAAAGTTCTTTACAAATGTAACATTTGTAGTAAACCTTTACGAGATCCACATTCCCTTAAACGTCACATGCTGATGCATGAAGACAAATATTTAAGCACCAAAAAATATCAGTGTGAATATTGTCAGAAAggatacaaatttaaaaactcgTTAAACCAACATCTTAAGATGCATAGAGGAGAAAATAAGTTATACGTGTGCGACATTTGTGGAAAAGCTTTGACTACGAGTAGAAGTTTGGAAGATCATATAAACGTACATCAGGGTTTGAAACCATTTAAGTGCGATGAGTGCCAAAAACACTTTGCTACACGGAACAGTTTGCTGATTCACAAGAGATCACATGCAGGAGTTCGACTTTTTCGATGTGAAGTGTGTTCAAAATCATTCACCCAACGTTCAACATTAACTATTCACGTGCGAGGTCATACGGGACACAAACCTTATGTTTGTGATATTTGCCAGGACGGGTTTGTTAGTAAAGCTACCTTACGCTTGCATCAGAAGAATAAACATAACGCGCTCAAATATGAGGCTCaGAATATTACAGTATTTAACATCGAAGATGAAGAATCGGATACATTAAATTTTGACATTAGATATGTGTGCGAATGTGCGATATgcgcaaaaaaatttgttcatATGGATTACCTTAAGAAACATCTGGTGATGCATAGCGATGAAAAACCTTTTCTCTGCGATCTTTGTCCAAAAACGTTCAAAAGAAAACACGAACTCACACTTCACAGAAATTGTCATgataaagaaaagaaatttgaatgtGACATTTGTTCCAGGAAACTCAAAACGAAAATTCAATTGCAGTTGCATAAAAACCGTCACTTAAAAAAGTACACAGTTTACTGTTCCGTTTGCAATGAAGGTTTCTATAAACTTCAAGAACTCAAACGACACGTCCTTAAAAAACACGAAAATGTCGTCTACACGTGCGAAATATGTGGCAAGCCTTTAAGAGATGAAAACTATTTAAAGCGCCACATGGAAATCCATAAAGATAATTACATTTCAAACAAGGAATACAAGTGCGATATCTGCAACAAAGCTTATCACTTCAAAAGCACCTTGACACGGCACGTTAAAGAACATACAGGAGGGAAAGCGTTGTTCGTATGTTACATATGTGGTAAAGCTTTATCCAGTAGCAAGAGTTTAGAAGAACATATAATCGTCCACCAAGGCCTTAAACCTATGAAATGTGAAGAATGTGGTAAATGTTTTGCCAAACGGAATAGTCTTAGAGTCCATATGCGCTGTCACACAGGAGTTAAACCGTATCGATGTGAAGTATGTGCAAAATCTTTTACTCAGCGACCACCGCTCATTATACACATGCGATATCACACAGGAGAAAGACCTTACGTTTGCGATATTTGTGATAATGCATTTGTTAGTAGAAACTTGTTGAATGTACATAAGAGAAGTAAACATCAAATTATGGCGGTAAAGCTCTGGTTTACTAGGAGAGCGGTGCCGTCTTTGAATGGCCGTAAAATACGGTTAAAAGTTGAGAGTGTGGTTCGGGAAACCATACCAGTTGTGAAAGCTGAAATGTCTAATCGAAATATTTACACTGTTGTACACAATTCAAAGACTTTTTCTAAGGAAGAATTAAAGAGGACTGTTTCGGCAATTAAAACGGAATCGTCTGCCTTACCAAATGTTTTAATGACTGCTGTGATGCCGACAAAAGTGAATACAAATAGAATTACTGCTCAACCGAATAGCACTCCAATAGACTCGAACAATGATTTACAGTTACCTAAAACTAGTTCACGTATGTTGCGGAAACCGAAAAAAACTTCAAAGAATATTTCGACCACTGATAGGGATTCGTCcgatttatcaaaaaataaaggAACCATACCACTTTTGAAAAGTGAATTACCACATACTACTATTAATACAGACATTCTCATTACTGCTGTGATGCCAAAAGTGAGCATAAATAGAGTTACTGGTCTACCTAATATTTGTACGATATGCTATAAACATTGTCCTAGTAGTTGTAAACTTAAAATTCACATGCTAAGCCACAGTAACGAGAGACCTTACCGTTGTGGTGTATGCTCGAAAACCTTTAAACGTTCTAGTCAAGTTAAAATGCACATGGTCGTACACTTAAATGAACGAAAAGCAAAGAGTATCACTACGAAATCAAAGAGCGAGCCCAAGATAGTAGAGTCAGATTTCGTATTGCGAAAACGAAATGCTAGTGTTGATGTAATCCCAGAAGATGAACAAATATTACTTAGCGTTGAAACCTGTCGAATATGTAATAAAAGCTTTAGGAATAAATGCACACTCGCCGCGCATGAAGCTACTCATAGCAAAGAACAACCGTTTGAGTGTGAAGTAtgctttgaaaaatttaaacttctATCTAAACTTAAATTGCATATCAGCGAGCAGCACATAGACTTAGTTGACTGTCCATATAAATGCGGTCAATGTGAAAAATCATTTCAATCGGCGAAACGTTTAagtgttcatcaaaatatacatGACGGTGTATTTTTTACTTGTTCAGTTTGTGAAGAGAAATATCCGAGTCACAGAAGTCTTAAACTGCATTTTACAGCTGTACATGgagaaaaaaccgaaaatgaAAAGTATCGATGTAGGTTTTGTTCCAAATCATTTGCGACTCGATACCATTACAACAAGCATCGCAATTCCCACAAGGGAATCAGAACTGCGAACGGAATCCTATGTCAAATATGCCGGCAGAGTTACAAAAATTCCGTGTCATTACGCCAACATATGAGAAGTCATTATGCAAACAACGGTAGCAAATATGTATGTGATACATGTGGTAAAATGTTATCAAAGAAATCACTACTAACAGAACATAGAAATCGCCATGCAGGAATTAAACCATTTGTATGTGACAGGTGTGGAAAGGCTTTTGTAAGTAAGAGATACTTAGACGGTCACAGTATTGTGCATACCAAAGAAAAACGTTATACGTGTAGCGTATGTCGTGCTGCATTTGGTCAAAGAAGTACATTGGTTACCCACATGAGAATTCATACGGGAGAAAGACCTTATACTtgtgaaatttgtaaaaagAAGTTTACATCTTTGAGTTCACTCAACAGCCACAAAAATAGACCACACCAGCTTGTTGGTAACAAAAGCAACAAGTTGaattga
Protein Sequence: MATSDENVVIASLLGEGAEMQEKPKKKKFWVHPICKKRSTKGKYHTLFPNLIDDTIKFYQYFRMTHEQFLDLLEKLQLEINRRRAIEPKERLAVCLRQVSFSDTTFLKYLTVNIHTFLFQLFYLTFRYVQTTYMEHRCHHCPKVFLRLSKLNAHLIMHSDERPFTCDSCPKTFKRRQEFINHKRLHENSDLYSCDICALSFKRKFNLDVHLKRHSKNYTIICDVCNVGFYSNWAYKGHYSSRHSTAVQDKPHLCNLCPKKFKKRHELIAHLRSHEKVKKFQCDICSKKLTTELQLRLHKDRHLKRYTFFCDTCEGGFYNKQELHKHIRIDHEKVLYKCNICSKPLRDPHSLKRHMLMHEDKYLSTKKYQCEYCQKGYKFKNSLNQHLKMHRGENKLYVCDICGKALTTSRSLEDHINVHQGLKPFKCDECQKHFATRNSLLIHKRSHAGVRLFRCEVCSKSFTQRSTLTIHVRGHTGHKPYVCDICQDGFVSKATLRLHQKNKHNALKYEAQNITVFNIEDEESDTLNFDIRYVCECAICAKKFVHMDYLKKHLVMHSDEKPFLCDLCPKTFKRKHELTLHRNCHDKEKKFECDICSRKLKTKIQLQLHKNRHLKKYTVYCSVCNEGFYKLQELKRHVLKKHENVVYTCEICGKPLRDENYLKRHMEIHKDNYISNKEYKCDICNKAYHFKSTLTRHVKEHTGGKALFVCYICGKALSSSKSLEEHIIVHQGLKPMKCEECGKCFAKRNSLRVHMRCHTGVKPYRCEVCAKSFTQRPPLIIHMRYHTGERPYVCDICDNAFVSRNLLNVHKRSKHQIMAVKLWFTRRAVPSLNGRKIRLKVESVVRETIPVVKAEMSNRNIYTVVHNSKTFSKEELKRTVSAIKTESSALPNVLMTAVMPTKVNTNRITAQPNSTPIDSNNDLQLPKTSSRMLRKPKKTSKNISTTDRDSSDLSKNKGTIPLLKSELPHTTINTDILITAVMPKVSINRVTGLPNICTICYKHCPSSCKLKIHMLSHSNERPYRCGVCSKTFKRSSQVKMHMVVHLNERKAKSITTKSKSEPKIVESDFVLRKRNASVDVIPEDEQILLSVETCRICNKSFRNKCTLAAHEATHSKEQPFECEVCFEKFKLLSKLKLHISEQHIDLVDCPYKCGQCEKSFQSAKRLSVHQNIHDGVFFTCSVCEEKYPSHRSLKLHFTAVHGEKTENEKYRCRFCSKSFATRYHYNKHRNSHKGIRTANGILCQICRQSYKNSVSLRQHMRSHYANNGSKYVCDTCGKMLSKKSLLTEHRNRHAGIKPFVCDRCGKAFVSKRYLDGHSIVHTKEKRYTCSVCRAAFGQRSTLVTHMRIHTGERPYTCEICKKKFTSLSSLNSHKNRPHQLVGNKSNKLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -