Basic Information

Gene Symbol
Iswi_1
Assembly
GCA_963082805.1
Location
OY720167.1:25458753-25462416[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5e-06 0.0043 18.3 0.0 3 41 809 848 808 848 0.96
2 2 0.19 3.1e+02 2.7 0.0 6 21 914 930 910 934 0.88

Sequence Information

Coding Sequence
ATGTCTAAACCTGAAGAAAAAACCCCGGAGACGGGTGATACAGGAGAAAACTCTAATGCCTCTTCTTCCGATACCCTATCTTCCAGAGGTAAAGGAGAAGACTTTGAAACCAAATTGGAAACGGATCGAGGAAAGCGTTTCGATTACCTACTTAAGCAAACGGAAATCTTTTCCCATTTCATGTCATCGCAACCTTCGAAAGGTACTCCGAAGCCAAAGACAGGAAGACCTAAAAAGGTTAAACCGGAACCTGAGCCTGAACCGGAACCAGAACCAGACAAAGACGAACATCTTGAACCCGGAGATCACAGACATCGTAAAACTGAACAAGAAGAAGATGAAGAGCTTCTGGCAGAATCCAACACGAAAGTTAAGCCTACGGTGCGATTTGAATGCTCACCTCATTACATTAAGAATGGGGAAATGCGTGATTATCAGATACGGGGACTTAATTGGATGATTTCGTTATACGAAAATGGCATTAATGGAATTTTAGCTGATGAAATGGGTTTGGGAAAAACCCTACAAACTATTTCCTTGTTGGGATTTATGAAACATTACAAAAACATTCCAGGACCACATATCGTAATCGTTCCGAAATCAACTTTAGCTAATTGGATGAATGAATTTAGTAAATGGTGCCCCAGTCTTAGGGCTGTGTGTTTAATCGGAGACCAAGAAGCTAGGAGTACATTCATAAGAGAAGTAATGATGCCAGGAGAATGGGATGTCTGTGTAACTTCTTACGAAAtggtaattaaagaaaaatcagtattcaaaaaattcaattggCGTTACATGGTCATCGATGAAGCCCACAgaatcaaaaatgaaaaatcaaagCTCTCAGAAATTCTACgagaatttaaaaccaccaacAGGTTACTCCTAACAGGAACCCCATTACAAAACAATCTTCATGAACTATGGTcccttttaaatttccttttaccAGATGTTTTCAATTCTGCAGACGATTTCGATGCTTGGTTCAACACAAACCAATGCTTGGGTGATAATGCTCTAATAGAGCGTCTACATGCagtattaaaaccatttttactTCGCCGTTTGAAATCTGAAGTGGAAAAAAAGCTTAAACCTAAAAAAGAAGTTAAAGTTTACGTGGGTTTAAGTAAAATGCAACGAGAATGGTACACAAAAGTACTTATGAAAGATATTGATATTGTAAACGGGGCAggaaaaattgagaaaatgagattacaaaatattcttatgCAACTTCGTAAGTGTACAAACCATCCTTATTTGTTTGATGGCGCTGAACCTGGACCACCTTACACCACTGATGAACATTTGGTTTATAATTGTGGCAAGTTGGTTATCTTAGATAAATTGTTACCGAGAATGAGGGAACAAGACTCCAGGGTACTGATTTTTTCACAAATGACAAGGATGTTAGATATTTTAGAAGATTACTGTTTGTGGAGACAGTATCAATACTGCCGTTTGGATGGTCAAACCCCACACGAAGACCGTCAACGTCAAATTAATGAGTACAACGAACCGGGTAGCAGTAAATTCATATTCATGTTGTCTACAAGAGCTGGTGGACTTGGAATTAATTTAGCTACAGCCGATGTGGTTATAATTTACGATTCTGACTGGAATCCTCAAATGGATCTTCAAGCTATGGACCGTGCCCATAGAATTGGGCAAACAAAACAAGTTAGAGTCTTTagaTTTATTACGGAAAATACCGTCGAAGAAAAAATAGTGGAACGTgctgaaattaaattaagactTGACAAATTGGTTATTCAACAAGGACGCCTTGCAGATAATAAATCAACAACCCTAAACAAAGACGAAATGTTAAGCATGATTCGATATGGAGCCAACCATGTCTTCGCTTCAAAGGATTCCGCAATCACCGACGAAGACATTGACTCTATTTTACAAAAGGGTGAAGCAAAAacTGCAGAACTTAATCAGAAATATGAAGCACTTGGGGAATCTTCTTTACGTAATTTTACTGTGGACACGCCAAATGAATCCGTTTATCAATTCGAAGGTGAAGATTAcagggaaaaacaaaaaactttaGGGATTGGTAACTGGATTGAACCCCCAAAACGTGAACGTAAAGCTAATTATGCTGTGGATGCGTACTTCAGGGAAGCTTTAAGAGTTTCAGAACCCAAGGCTCCAAAGGCTCCACGTCCACCAAAACAACCGATTGTTCAAGACTTCCAATTTTTCCCTCCACGTCTCTTTGAGCTCTTAGATCAAGAAATCTATTACTACAGAAAAACTTTGGGATATAAAGTTCCTAAAAATCCAGAACTGGGACCGGAAGCAAGCAAACAACAAAAAGAAGAGCAGCGTAAAATCGATGAATCAGAACCCCTGAGTGAAGATGAACAATCAGAAAAAGAAAGTTTACTTACACAAGGTTTTACTAATTGGACTAAAAGAGATTTTAACCAATTCATCAAAGCTAACGAAAAATACGGACGAGATGATATAGAAAATATCGCAAAAGAAGTTGAAGGTAAAACCCCTGAAGAAGTTATGGAATATTCCGCTGTATTTTGGGAACGCTGTCATGAACTAACAGATATTGATCGTATAATGGCACAAATTGAACGTGGAGAAGCAAAAATCCAAAGAAGAGCCAGTATTAAAAGGGCTTTGGATGCTAAAATGGCGCGATATCGTGCCCCATTCCATCAATTAAGAATTGCTTATGGCACCAACAAAGGGAAAAACTACATGGAAGAAGAAGACCGATTCCTTGTTTGTATGTTACATAAATTAGGATTTGATCGAGAAAACGTCTATGAAGAACTCCGAGCTGCAATTAGAGCTTCACCCCAATTTAGATTTGATTGGTTTTTGAAATCTCGTACTGCAATGGAATTGCAAAGACGTTGTAATACCCTCATAACTTTAATTGAAAGGGAAAATCAGGAATTGGAAGAGAAAGAGAAAGCTGAACGTAAGAAGAAGCTTCCAAAGACAGGTTCCGTAGCTGGGGCACCTTCACAAGTGACCACGAAAACAGCCCAAAAACGTAAAAACGACAGCACCGGTGGTGGtgcagaaaagaaaaagaagaaaaaatga
Protein Sequence
MSKPEEKTPETGDTGENSNASSSDTLSSRGKGEDFETKLETDRGKRFDYLLKQTEIFSHFMSSQPSKGTPKPKTGRPKKVKPEPEPEPEPEPDKDEHLEPGDHRHRKTEQEEDEELLAESNTKVKPTVRFECSPHYIKNGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGFMKHYKNIPGPHIVIVPKSTLANWMNEFSKWCPSLRAVCLIGDQEARSTFIREVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDAWFNTNQCLGDNALIERLHAVLKPFLLRRLKSEVEKKLKPKKEVKVYVGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDEHLVYNCGKLVILDKLLPRMREQDSRVLIFSQMTRMLDILEDYCLWRQYQYCRLDGQTPHEDRQRQINEYNEPGSSKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQTKQVRVFRFITENTVEEKIVERAEIKLRLDKLVIQQGRLADNKSTTLNKDEMLSMIRYGANHVFASKDSAITDEDIDSILQKGEAKTAELNQKYEALGESSLRNFTVDTPNESVYQFEGEDYREKQKTLGIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYYRKTLGYKVPKNPELGPEASKQQKEEQRKIDESEPLSEDEQSEKESLLTQGFTNWTKRDFNQFIKANEKYGRDDIENIAKEVEGKTPEEVMEYSAVFWERCHELTDIDRIMAQIERGEAKIQRRASIKRALDAKMARYRAPFHQLRIAYGTNKGKNYMEEEDRFLVCMLHKLGFDRENVYEELRAAIRASPQFRFDWFLKSRTAMELQRRCNTLITLIERENQELEEKEKAERKKKLPKTGSVAGAPSQVTTKTAQKRKNDSTGGGAEKKKKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01510566;
90% Identity
iTF_01293608;
80% Identity
-