Basic Information

Insect: Hemicrepidius niger
Gene Symbol: -
Assembly: GCA_963082805.1
Location: OY720161.1:15775294-15777063[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1e-06 9.9e-05 23.1 0.0 4 40 14 50 11 53 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1e-06	9.9e-05	23.1	0.0	4	40	14	50	11	53	0.89

Sequence Information

Coding Sequence: atggaaaaaaataaaatcaggcACACTTGGGACAAGAATAATATGGAGGCAGCAATAGATgcagtaaaaacaaaaaaaatgggaTGGAAGTTAGCGGAGAAAACTTACCAAGTTCCAAAAAGTACCTTACGTCGGCGAGTGTTGGAGAAGAATAAAGTAATTAAGGGCGCGAACAAAGGTTTTTTGGGTGGTTCTACAACTGTTTTTACTCCAGAAGTCGAGGATGAATTAGTCCAGCACATAAAAACCATGGCGGATCGGTTTTTCGGCTTTACTGCTGTGGACATTCGTAGGCTAGCTTTTCAGTTGGCTGAAAAAATGAGTTTAGACCACAAGTTCAATAAAGTAAAAGGCATGGCTGGTTGGGACTGGTACAGCAAATTTATGAAACGAAATCGGAGTCTAAGCCTAAGAACTCCAGAAGCAACTTCTCTGGCTAGGGCAGAGGCTTTCAATGAAGTGCAAGTAAAACGATTTTTTGATGGTTTAAAGAAGGTGATGGAGGAAAACAATGTGCTTCCTGAACAACTATATAATATGGATGAATCGGGATTCTCCACCGTTCAAAATAAGACTGAAAAAATTTTGGCACAGCGTGGAAGAAAACAAGTTGGAACCTTAACCAGTGCAGAGAGGGGACATCATTTCACAGTTATATGCTGTATGAATGCTGTAGGTCAATTTGTACCACCTGGCATGATTTTCCCtcggaaaaatatgaaaaaagaacTGACAGATCACGCCCCAACAGGCACAATAGGGCTGGTTCAAGAGAAGGGATGGATGAATGGAGAAGTGTGTTTAAAATGGATGCAGCATTTTAAAAGATACACCAATCCattgccaaataaaaaaatcttacttttacTAGATGGGCATAGCAGCCATAAGAATTTAGAGGTGCTGCAATATgcgaaagaaaataatattatactatTTTGCTTTCCTCCTCATACTACGCATCGGTTACAACCGCTAGATGTCAGTTTTTTTGGACCACTTACTAGTTATTATAATCACGCCGTGAGGCGTTGGTTAGCTGCCCATCCCGGAAGAACCGTAACCCATTTCCAGGCTGCTGAATTGTTTAATGAAGCATATACAAAGGCTGCAACAGTGGGAATAGCAGCTAGTGGGTTTAGAGCTACTGGGTTGGTTCCTTTCAATGAGGATATATTTCCTGATTGGATGTTCGCACCATCCAAAACTACTGATCTGCCAGTTCCGGAAAATGATGAAAATACGGTCACACACCCACCTAATGATGTAGAGGCGAGTTGTTCAAATGCCTCACCGTCCTCCTCCAAGCAGAATAATATTGAACGAATGTTACCACCAGAAAAAGTTgacaataacaatagtaatgttGTAAAATTAATTGAGCAGCTATCACCCTTACCACAAATTGAAAGAAGAACTAGTAATAGAAAACGACCAAGGAAAGGTAAAATGGGCATTTTAAATAGTACTCCAGATATAGAAGAAGGAAAGGTGAAAGCTagggaaaaaaatgaaaaagaacaACGGATTGCagcaaaaaaagcaaaaaaaaacctACAAATTATAGATGAAGAAGATGTTGAAGAACATTTCGAGGATGACAACACCAGTGATGTTGCATGCATTTTTTGCAACGAATTATTCTCAAAATCCAGAAAAGGTGATATGTGGATTCGGTGTCAGCAATGCGGTAGCTGGTGCCATACAGACTGTGCGGGAATTGACAGAAAAACCAAACAATTTACTTGTGACTTATGCCGTCAGTTTTAG
Protein Sequence: MEKNKIRHTWDKNNMEAAIDAVKTKKMGWKLAEKTYQVPKSTLRRRVLEKNKVIKGANKGFLGGSTTVFTPEVEDELVQHIKTMADRFFGFTAVDIRRLAFQLAEKMSLDHKFNKVKGMAGWDWYSKFMKRNRSLSLRTPEATSLARAEAFNEVQVKRFFDGLKKVMEENNVLPEQLYNMDESGFSTVQNKTEKILAQRGRKQVGTLTSAERGHHFTVICCMNAVGQFVPPGMIFPRKNMKKELTDHAPTGTIGLVQEKGWMNGEVCLKWMQHFKRYTNPLPNKKILLLLDGHSSHKNLEVLQYAKENNIILFCFPPHTTHRLQPLDVSFFGPLTSYYNHAVRRWLAAHPGRTVTHFQAAELFNEAYTKAATVGIAASGFRATGLVPFNEDIFPDWMFAPSKTTDLPVPENDENTVTHPPNDVEASCSNASPSSSKQNNIERMLPPEKVDNNNSNVVKLIEQLSPLPQIERRTSNRKRPRKGKMGILNSTPDIEEGKVKAREKNEKEQRIAAKKAKKNLQIIDEEDVEEHFEDDNTSDVACIFCNELFSKSRKGDMWIRCQQCGSWCHTDCAGIDRKTKQFTCDLCRQF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00788784;
90% Identity: iTF_00788784;
80% Identity: iTF_00788786;