Basic Information

Insect: Hemicrepidius niger
Gene Symbol: -
Assembly: GCA_963082805.1
Location: OY720164.1:14902698-14904500[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.7e-07 5.5e-05 23.9 0.1 2 39 16 53 15 59 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.7e-07	5.5e-05	23.9	0.1	2	39	16	53	15	59	0.88

Sequence Information

Coding Sequence: ATGGTTGGAAATTATCAGAGAAAATCAACCAGGCAGTCATGGAGTGAAGGGTCTATGACAAATGCTATAAATGCCGTTAAAAGGGGAGAAATGGGGTGGCTGAAAGCATCTAAAACATTTGCAGTTCCACAGGCAACACTAAGACGACGGGCACAAGATCGAAAGATGCGCGCAAAAGGTGCTACCAAGGTGCTTGGACGTTTCTTCAGTACATTTGATGAAGAAACAGAGAAGGAGTTAGCGGAACATATAATACTATTGGAATCAAGACTGTTTGGACTCACAACCAATGATATAAAAACACTCGCATTTCAATTGgcaaataaaaatggaattcCTCATAGATTCAAAAATGACAGTGCTGGCAAAGAATGGCTCCGGGGCTTTAGAAATCGTCATCCAGAAATCTCTTTGAGACAACCCGAAGCAGTTTCTGCGGCAAGGGCAATGGCTTTTAATAGGCCAcaaattgaaaagttttttaCTACTTTGGAATCATTAATGGAAAAGGAATCCATCGACGTTCATAGGATTTACAATATGGACGAAAGTGGACTTTCCACTGTACAAAGGCCATCAAAAATTTTTGCGAAGACTGGAAGGAAGCAAGTAGGCTCTTTAACTTCAGCTGAGAGAGGACTACACGTCACTGCTGTATGTTGCATGAACTCTGTTGGAAACTTTGTCCCACCTGCCTTAATTTTCCCTaggaaaaataggaaaaatgaGCTGGTGGACTCAGCACCACCAGATACCTTGGGCTTGTTTAACGAAACGGGGTGGATGACTTCAGAGTCATTTGTTCTATGgctaaaacattttcaaaattttgttgcaGCCTCGAAGGAATCCAAAGTTCTTCTACTTCTGGACGGCCATGCAAGCCACAAGTCCCTAGAAGCTGTTACCTTTGCCAAAGATAACGGAATAATTATGATGTGTTTTCCACCACACTGCACGCACCACATTCAACCGCTTGATGTGTCCTTCTTTGGGCcacttaaaactttttataatcaAGAATGCACCAACTGGCTCAAAAACCATCCAGGGCGGGTAATAACAATATACCAAATCGCTGAACTTTTTGCTGTTTCATATGGAAAAGCAGCATCTACCAAAAATGCAATTAGTGGTTTTTTGAAAACTGGAATTAGACCTTTCAACACTCATGTTTTCCCAGATGAGTTTTTTGCACCAGCGGAAACAACCAACATTGCAGCTGACGCAGTGGCTTCAAGTTCTATTCAAACTCAACAGCTTCACAATATTGTCACCATTGATCTAAATGAGGGCAGTTCAACTCAATCTATTGACAAAAATCATGTCCCAGTACTAACTGAAGATAAAAGCAAAATTGAAAGAGACAAAAACGAAATTCAAATGCAGAAATCAAAACTTAAATTCACTGTTCAGGAGCTGTCTCCAACGCCTGCGGCCACTGAAATAAAATCAAGAAGAAGAAAGCAGACGAACAGTATTTTGACAACTACTCCCAACATAGACGAGCTTAAGGAAAAGgcagaaaagaagaaaaatgtagAAGCTAAACGttccaaaagaaatattttgcagACTAAAACTACCACAAAGACTGCTGTAGATGAGGAAGAAGATGAAGATCCATTTGCAGATGTGGAAGATGAAGACGATGCTTTCTGTCTATACTGCAATGACACTTTTAAAAACTCAAGATCCAGAGAGGTGTGGATTAACTGTACCAAATGCCAGATGTGGGCTCATAGTGATTGTGCAGGCATCTCACCtaagcaaaaaatttatatatgtGAACTgtgcaaataa
Protein Sequence: MVGNYQRKSTRQSWSEGSMTNAINAVKRGEMGWLKASKTFAVPQATLRRRAQDRKMRAKGATKVLGRFFSTFDEETEKELAEHIILLESRLFGLTTNDIKTLAFQLANKNGIPHRFKNDSAGKEWLRGFRNRHPEISLRQPEAVSAARAMAFNRPQIEKFFTTLESLMEKESIDVHRIYNMDESGLSTVQRPSKIFAKTGRKQVGSLTSAERGLHVTAVCCMNSVGNFVPPALIFPRKNRKNELVDSAPPDTLGLFNETGWMTSESFVLWLKHFQNFVAASKESKVLLLLDGHASHKSLEAVTFAKDNGIIMMCFPPHCTHHIQPLDVSFFGPLKTFYNQECTNWLKNHPGRVITIYQIAELFAVSYGKAASTKNAISGFLKTGIRPFNTHVFPDEFFAPAETTNIAADAVASSSIQTQQLHNIVTIDLNEGSSTQSIDKNHVPVLTEDKSKIERDKNEIQMQKSKLKFTVQELSPTPAATEIKSRRRKQTNSILTTTPNIDELKEKAEKKKNVEAKRSKRNILQTKTTTKTAVDEEEDEDPFADVEDEDDAFCLYCNDTFKNSRSREVWINCTKCQMWAHSDCAGISPKQKIYICELCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00788767;
90% Identity: iTF_00788767;
80% Identity: iTF_00788751;