Hnig032553.1
Basic Information
- Insect
- Hemicrepidius niger
- Gene Symbol
- bab1
- Assembly
- GCA_963082805.1
- Location
- OY720167.1:23266172-23268019[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-13 6.6e-11 42.9 0.0 1 45 367 411 367 411 0.96
Sequence Information
- Coding Sequence
- atggGGAGTACAGCCCAACAATATTGCCTGCGATGGAACAATCATCGTTCCAATTTACTGACCGTATTTGACGAACTCCTACAAAACGAGGCCTTCACTGATGTTACTCTTGCCTGTGATGGAGTAAGCCCAATAAAGTGCCATAAAATCGTCCTAGCAGCATGCTCGCCGTATTTCCAAAACCTTTTCACCAACCTCTCTTGTAAACATCCCGTGGTAGTTCTCAAGGATGTAAAGTACTGCGAGATTAAAGCAATTCTGGAATACATGTACAGGGGAGAAGTTAACGTTGCTCAAGACCAACTGGCCGCATTGCTCAAAGTAGCGGAAGCCTTAAAAGTCAAAGGGTTGGTTGAAGAGAACAGGGGAAGTAATGAGCACCATCATTCAACTCTGCATTCGCGAGATGAAGAACCTCTCTCTCAACATTCGCCACCTAATATAACGACTTCGACTCCTAATGTGCAATCAGCCCACAGCAGTAGCAGCAACAACTCACCTCCTCATTCTACCAGCGGTTTATccttcagaaaaaatccatatATGTACGGAAAGTCATCGAGTATGGATCGTAGCTCTCGAATGAATTTACCCATGTGGGCTGTTCCTGGATTACCCCTCCCCCACCATCCATCTCCCGTACCTCCCCAAAATCATCCCCACGCTGCAGCCACCGCGGCCGCAGCGATGTTAAGCAGCTGTTATGAAGCAGCTAGTTCTGATATGTCCCCACTGAAAAGGAAAAAGCTTTCTAGTTTGTTGATGAATAGGGATACGCCGATTTTACGAACAGTCCTTGGACAGGGCCAAGTTGATTCTTTGCAACCTGTTAGTTTAGTTTGCCACACCGATAGTCACGAAATGCACTCGAATGGCTCGGAACAGGATCGAACAGAAAAACATATGAAGAATGAACCTTTAGAAGATGCACAATCTCCCTATACAGACCTTACCATAATGGAAGatgaagaaaaatcaaaattggcaATTCCTTCGTCTTCTCCGCAATCGTACTCGAATGAAATGAGAGGTGTGCCGTCTGGTATAGCCAGATATGTTCCTCCGCAGAGACCAGATTGGAAACGCTACAAACAATACACGCGCGATGATATTATGTCAGCAATCGACGCAGTTCGAAATGGTATGAGTGCTTTGCAAGCAGCGAAAAACTATGGGGTTCCGTCCCGTACTCTTTACGATAAAGTTAAGAAAATGGGAATTACAACAAGTCGACCTTTTAAAAGGGGAACTAATGGAAGTAAAGCTTGCTTTCCATATGGATTAAGCGGAACTAGTTCACCTTATGGTGGGCACCTGTCAGAAAATGACGACCCAGGCATTAATAACCATTCTGCTCTGTTGGAAGCCAGCAATTTTTTGCAGCATGCTCTTGATGGTCGGGGAACAGACGAAAGAGATGCCCTGGCAGCCATGGCGGCAGCTGCTGTTGCCCATGCTGCCGTTACTCACGCCTCAAGCCCCCCTAACCAAGGAGTTCCAAGAACTCCAAGTCCCAGTATGATGAAATACATACATCACAACAGCATGACACCCTCTCCTGCTCCCGGAAGCGAACACCATCATAGTGAAACCAATGGTAGTTCAGAACGAGAAAGAGACGATGACGAAGATCAGGTTGAGGATTTATCTGTTGGAAGAAAGCAAGAGTCGAGGGTTATAATGCCACCCATGAATCAAGTTTCAACGATAATCAAAAAAGAGGAAATGTTGAAAGATACGCTCAGGGAAGAAAGTCGGAGGGAAGTAAGTATGGAAGAGATGGAGTAG
- Protein Sequence
- MGSTAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACDGVSPIKCHKIVLAACSPYFQNLFTNLSCKHPVVVLKDVKYCEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRGSNEHHHSTLHSRDEEPLSQHSPPNITTSTPNVQSAHSSSSNNSPPHSTSGLSFRKNPYMYGKSSSMDRSSRMNLPMWAVPGLPLPHHPSPVPPQNHPHAAATAAAAMLSSCYEAASSDMSPLKRKKLSSLLMNRDTPILRTVLGQGQVDSLQPVSLVCHTDSHEMHSNGSEQDRTEKHMKNEPLEDAQSPYTDLTIMEDEEKSKLAIPSSSPQSYSNEMRGVPSGIARYVPPQRPDWKRYKQYTRDDIMSAIDAVRNGMSALQAAKNYGVPSRTLYDKVKKMGITTSRPFKRGTNGSKACFPYGLSGTSSPYGGHLSENDDPGINNHSALLEASNFLQHALDGRGTDERDALAAMAAAAVAHAAVTHASSPPNQGVPRTPSPSMMKYIHHNSMTPSPAPGSEHHHSETNGSSERERDDDEDQVEDLSVGRKQESRVIMPPMNQVSTIIKKEEMLKDTLREESRREVSMEEME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00838716;
- 90% Identity
- iTF_00788514;
- 80% Identity
- iTF_00789458;