Hnig017923.1
Basic Information
- Insect
- Hemicrepidius niger
- Gene Symbol
- clz9
- Assembly
- GCA_963082805.1
- Location
- OY720162.1:16853631-16857945[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0032 0.31 11.9 0.0 3 35 19 52 17 61 0.85 2 2 2.1e-09 2.1e-07 31.7 0.1 3 39 61 97 59 102 0.90
Sequence Information
- Coding Sequence
- ATGGCTCGCAACTATACAAAGTCTGTTCGGCACCCACATCTCGGTTACGATAAGGAGCTATTAAAAAAGGCCATTGACGATGTAAAGAATAGAAGGTTGACATACAGAGAGGCTTCACAAAAATATGATATCACTCTTtccgttatacaggaaATGGGTAAAATTAAGACCTATACCGCTGAAGATGTAGAAGCAGCTGTAGCGGCTGTTAAGGTGGGTAGAATGAGTCAGAAATCTGCTGCAAACTCATACAATATTCCAAGATCTACGTTGATATTACACTTAAAAGGATGGAAAAATCGTTCACAACCAAAAGCTGGTGCGAAAATAGGGAGACCAGTAGAATTAGCTGCAGAGACTGAGGAACAATTATCCAAATACATTAACATAATGAATAAGTGGGGTTGTGGTATGTCAAAAAAGGAATTAATTAATGTTGTTGCAGTTTACgtggtagaaaataaaattaaaaatcgttttAAAAACGGCATACCAGGGAAAGAATGGTTCCAAGGTTTCTGTAACAGATGGGACCTTTCTTGCAAAAAAACAACAAAGCCCCAAGTAATAAGAACCATTCAAAcgaaaccaaaaattatttatggttTCGACAATTTATATGGAAACACAATTGCAGATTTGGGTCTAATAGACAAACCCAAACAAATATTCAACCTGGATGAAACATCAGTGTGTCATGATCCTATGACTACTAAAATAGTATCAAAGAGAAACTGTGGGGTATTTCGTAATACATCTTGCACAGGAAGAACGAATACGAGTGTTTTGTTCTGCATTTCTGCTAATGGTGACAAACTGCCACCCTTTATTATTCACAAAGCTAAGCATCTGTGGGATAGTTGGATGCCAGAAAAGGCTTATCCAAACACTGGATATGCGGTATCAGCAAATGGCTGGATGACGGCAGAAGTGTTTAGCTCATGGTTTAAAAACCATTTTTTGAAGAATTGTCCTTCGGAAAGACCCTTATTAGTTATTTTTGATGGACATACATCACACATTTCAATTGATCTTATAAAATCAGCGATAGAGGAAAATATTGTGTTGCTAAAATTACCACCTCATACAACCCATCTCTTACAGCCCCTTGATGCCACGTCTTTTAatacatataaaaaaaagtgggaTGAGGAAGTTGCAATATGGCAAAGGGAACATTACGGCAGCACGTTAAATAAAGCAGATTTTTCAGTATTAACCGGTAAAATTTGGGAGGGGATGTCAAACTCAAGTTTAAAGCGAGGTTTTCAAGTCACTGGATTATTTGATGAAAGACTGGAATATCCAATAAATAGAAGTGCCATAAAAGAAACAGCATTTGTGCCATCCGAGCTAGAAGCATACCAaatacaaatgcaaaatgaaatAACAGATAATGACAATGCTGCAAACATGCTTTCAACATCTGCAAACAATATACCATTAGCATATACAAATAATGTGGCAACCACTTCTACCCACTACGTAGTTTCAACACCCACAAATAATGTGCCAACCACTCTTACTCACTGTGTAGCTTCAAAACCCACCAACAGTGTGCCAACCAGTTCTACTCACTGCGTAGGTTCAACACCCACAAACAATGTGCCATCAACATCTACTGACAATGTAGACATTGCACCATCGACAGCTACAGATACCATGCCATCGACAGCTAGTACCAGTTCCAACAATTCTTTTTCGTCATTTGAACAGCTTCTTTTGAATAAGATACAAAAACCTTCCACCACTGCACAAAAAAGAAGGAAGGTACCAACTAGTAATATGGCAGAAGTTCTAACTAGGGAATGGTATCTTCAATCTTTACAAAATGACAAAGAAACTCCAAAAAAGAAGACAGAAAAGAAGCAAGCATAG
- Protein Sequence
- MARNYTKSVRHPHLGYDKELLKKAIDDVKNRRLTYREASQKYDITLSVIQEMGKIKTYTAEDVEAAVAAVKVGRMSQKSAANSYNIPRSTLILHLKGWKNRSQPKAGAKIGRPVELAAETEEQLSKYINIMNKWGCGMSKKELINVVAVYVVENKIKNRFKNGIPGKEWFQGFCNRWDLSCKKTTKPQVIRTIQTKPKIIYGFDNLYGNTIADLGLIDKPKQIFNLDETSVCHDPMTTKIVSKRNCGVFRNTSCTGRTNTSVLFCISANGDKLPPFIIHKAKHLWDSWMPEKAYPNTGYAVSANGWMTAEVFSSWFKNHFLKNCPSERPLLVIFDGHTSHISIDLIKSAIEENIVLLKLPPHTTHLLQPLDATSFNTYKKKWDEEVAIWQREHYGSTLNKADFSVLTGKIWEGMSNSSLKRGFQVTGLFDERLEYPINRSAIKETAFVPSELEAYQIQMQNEITDNDNAANMLSTSANNIPLAYTNNVATTSTHYVVSTPTNNVPTTLTHCVASKPTNSVPTSSTHCVGSTPTNNVPSTSTDNVDIAPSTATDTMPSTASTSSNNSFSSFEQLLLNKIQKPSTTAQKRRKVPTSNMAEVLTREWYLQSLQNDKETPKKKTEKKQA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00788455;
- 90% Identity
- iTF_00788455;
- 80% Identity
- -