Hnig027125.1
Basic Information
- Insect
- Hemicrepidius niger
- Gene Symbol
- bab1
- Assembly
- GCA_963082805.1
- Location
- OY720165.1:3426910-3432376[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-14 1.3e-12 48.3 0.0 2 42 362 403 361 406 0.94
Sequence Information
- Coding Sequence
- ATGCAGCAATACTGTTTGCGCTGGAACAACCACCAACCAAATTTCATTGCAGTATTTTCTAGTCTTTTAAATAACGAGTCTCTTGTTGATGTTACATTAGCTGCAGAAGGAAGACATTTACAAGCACATAAAGTTGTTTTATCAGCATGCAGCACATACTTTCAGTCGCTGTTTACGATAAATCCTTGCCAACATCCTATAGTTATTTTAAAAGATGTCAAATTCTTAGATTTAAAAGTTTTGGTCGACTTCATGTATTATGGAGAAGTCAACGTTTCACAAGATCAACTGCCTCATATTTTAAAGACGgcagaaatgttaaaaataaaagGTTTAGCAGAAAAACCAGCAGATCAGTCTGCAACAAAATCTCAAAGCGGATCGACTGAAAAAGCCGAATTATTAACTCCTGGTGATTCAAATTGGAGTTCAGATGATATACAAAGGCAATCATTATCACCTTCTCCATGTCCTTTATCTCCTGCTAGTAAAAGaaaaagATTGAGAAAAACCTCAACTGGGTCAGGGTCAGGATCAGTTGAAAGAACGTCTGAAGATCATGGAAGTGAAGTTACATTGACATCACCAGGAGGAAGTTTGCTTGGAACAGTGATAAAACCAGATCCAGGAGGTTTTATTTCGGATTGTAGTACACCAATTCGTAGTAAACAGCACAGTAGTGATTCAGAACCGCATCGTGGAAGTTCACATGATAGTATTGAAGGCGAACCTCCTCATCAAATtactttgCAAGTTCCACAACAAGATACTTCACATAATTTGGACACAACTTCGTCACTTGATATTACCGACCCTTCTTCAATCTCTCAACAAACTAGTGCAGGATACCAATGGGGGATTGTGGATGGAGCCTATCCACGTTTTGCCCTTTCATCATGCCATTCTAACATTACCATACCAACTGATATGAATTACACAACGTCTACCTTACCTCAATGTTCTATTAATGATAATCCCAATTCTGGCAACGAATCATCCAACAGTACCATTAATCAGAATCACATATCTGCATCTGCACCACAAATGATCCAAAAACGTAAAAGAAGTATTAATCCACAGGCGGATGAAAATTTTGTACGTGCTTTAGAAGCTGTTAGATTTGGTGGAATTGGATTCTGTAAGGCAGCCAAAATGTACGGGGTTAATAATCGTACATTGTGGTTAGAATATAAAAAACGGGGATATCCAAATAATAGGATAAGCATTAAAAACCGTAAACAAGAATTCGTAGCCCCAATTGCAATCAGTCAAAATCCACCTACAAGCCCTACTGCAACAACTTCAATGAGTGATCAAGAAAATGAAGTAATCTGTAATACAGGGAATCATCCTGGTGCTGCTATTATTAGTGGAACATTTTTAGATACTCGGCATGTTGATTTATCACCAATTTTACAAAGACCTAGATATTTAGATACTGTTAGTATTAATACGCAACATACACTCGGCTTATCTGCAGTTAATTTTGAACAAATATCATTAGTAACAAGCCACACACAGTTATTGCAGCCATCGCAACCGTCACAAGTACAAAGCCATCAGTTAGTAATGGGTGTAAAACGTGGCCGTTTCTTAATGAGGCAACCACGTATTAAAAGAGAAAGTGATCCAAGTCAAAACCCGGATGGAGACCCATTATCCTTGCATTACTTATCGGTACCACCAATGAGAGTTGAAAGACAATGTTCTGATCCTTTACCAGCCCATTCACCACCGCCAGGTAATTTATTAACTGTACCTGGAGGTAGCATGTTGGTTAAGCAACATTCTCATCCTTTGTTACCAAGTGAAATGCATcagcagATACATATTTCACATCCGGCTCCTCTTCATATTCATGTGATACCAAATACATCTTCCCAAAGTGATGCCGAACGAGCTGCCAGTCCTGTGGTGGTAGTTTCTGATCCACTTGGAACTCATGATACGGCTCCTCTTCGAGCTGACACTGCTTCCAGTGTTACTTCAGCAGCCACTGCAACACTTAGGGTTCGGACAGATGAACTGAAACGTAGTGCATCCTCCCCCcagCCAAGTACCCGGTTGAGTCATTGTCCTGTAGTACGACCAGGTCCGGCATTAGGTTGTAATTATTGTTGGAACACTGTTGATAATCATGGAAGAATACTTAGGCGTAAAACAAAGTACCACTGTCCAGAATGTCAGACTAATTTGTGTATTGTTCCGTGTTTCCAAGAATATCATGAGCGACATGTTAGTAGTGGTCAGACTGACCCTCTAGCACTTACCACTTCGGTAATGAGAACTATATTTCCCAAAACTAGTTCAATGTGA
- Protein Sequence
- MQQYCLRWNNHQPNFIAVFSSLLNNESLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTINPCQHPIVILKDVKFLDLKVLVDFMYYGEVNVSQDQLPHILKTAEMLKIKGLAEKPADQSATKSQSGSTEKAELLTPGDSNWSSDDIQRQSLSPSPCPLSPASKRKRLRKTSTGSGSGSVERTSEDHGSEVTLTSPGGSLLGTVIKPDPGGFISDCSTPIRSKQHSSDSEPHRGSSHDSIEGEPPHQITLQVPQQDTSHNLDTTSSLDITDPSSISQQTSAGYQWGIVDGAYPRFALSSCHSNITIPTDMNYTTSTLPQCSINDNPNSGNESSNSTINQNHISASAPQMIQKRKRSINPQADENFVRALEAVRFGGIGFCKAAKMYGVNNRTLWLEYKKRGYPNNRISIKNRKQEFVAPIAISQNPPTSPTATTSMSDQENEVICNTGNHPGAAIISGTFLDTRHVDLSPILQRPRYLDTVSINTQHTLGLSAVNFEQISLVTSHTQLLQPSQPSQVQSHQLVMGVKRGRFLMRQPRIKRESDPSQNPDGDPLSLHYLSVPPMRVERQCSDPLPAHSPPPGNLLTVPGGSMLVKQHSHPLLPSEMHQQIHISHPAPLHIHVIPNTSSQSDAERAASPVVVVSDPLGTHDTAPLRADTASSVTSAATATLRVRTDELKRSASSPQPSTRLSHCPVVRPGPALGCNYCWNTVDNHGRILRRKTKYHCPECQTNLCIVPCFQEYHERHVSSGQTDPLALTTSVMRTIFPKTSSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00789460;
- 90% Identity
- iTF_00789460;
- 80% Identity
- iTF_00789460;