Basic Information

Gene Symbol
GATA-B
Assembly
GCA_907164795.1
Location
OU015434.1:18538307-18543762[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.1e-18 3e-14 52.9 3.9 1 34 168 200 168 202 0.97
2 2 1.3e-18 4.2e-15 55.6 7.8 1 34 307 339 307 341 0.97

Sequence Information

Coding Sequence
ATGGCATTCCGTAAATGGTATCGGATAAGGCACGTGCCGCACGCAAACACCGCCGTCCGGCCGCTCGGACAGTGTCGCGGCTGTCGCGGCGCGCGTGCTTGTCGCGTGACGTCACGCCGCGACACCGCGCCACCGCACCGCGCCACCGCACCGCGCCACACAGCGCATAGCTCGAGCACATGGCCGCGGGTTTGCGCGCGCATTCCGTCCAGGGCAGCCGTTGAATCACAACACTGCAGCTGTGGACGGCACCGACAGGTCATTGGTCCAATGCACCGCGCCGAGAGCGCGCTCACTATTGCGATTGAAGTTAATTCGCGGCAGGCGACACGTCAGCGCTACTTCACACAATCCGCGAGCCTCGCTCCAGTAGCCGTCGTACGTCGTCGTCGCACACCTCGCCGACCACACGTGCTACTGGGCTCACACGTCGCTCGCTGCACGCGCGCCGCTTGTTTATACTTCGTCGAGATGGCGGAGTTTTTCACTGAGGGGCGCGAGTGCGTGAACTGCGGCGCGATCCACACGCCGCTGTGGCGGCGCGACGGGACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCACGCCGCGCACGCGCTGGCCGCGCCACCACACGACATCCGCGCCCGCCGAGCGCCCGCGCCCGCTCCAGCGCTTGAGCGCACTTCAGTGACACTTGTGTTGGTTGCAGTGGCCGCGGACGGGGCCCCGCCGGGCGCGGATTTCTACAAGGGCTTCCTGTTTAACGGCATCACGTCGCCGCACGCGCTGCCCGCGCCGGCCCCGCTCCCAGCCTCCACTCCTTCCGACTACAAAACGAAGAAAGGGATGGGGACTAAGCGGCCCGGCATGTCGTGCACCAACTGCCACACGACAACCACATCGCTGTGGCGGCGCAACGCGCACGGCGAGACTGTGTGCAACGCGTGCGGCCTCTACTACAAGCTACACAACATCAACCGTCCGCTGGCCATGAAGAAAGACTCTATTCAGACAAGAAAGCGAAAACCAAAGAACAGTATAAAAGCTGAGAGGAGCCTCAAGACGGCGGTGCAGCGCACCACCGCCACCGGCGTCAAGATCGAGAACTTAATGGACGGCGGAGGCGGCGCGGGTGGCGGCGCGGTGGGCGCGGGGGGCGGGGCGCGCTCGTCGCTCAGCATGGGCTACTTCATGCAACACACGATGAAGCTGGAGGAGCCGCCGCCAGCGCACGCGGCGCACGTGGCGCACTCGGCACACTCGGCGCACTCGGCGCACTCGGCGCACTCGCACGCGCACGCGCTGGCGCAGGCGCACGCGCACGCGCACGTGCTGTACGAAGAGGGCGAGTACCGGCGCGCGGGCGGCGACGCCGAGCGGCTGGAGCGGCCCACCGTGGTGTCCATGGGCAGCTGA
Protein Sequence
MAFRKWYRIRHVPHANTAVRPLGQCRGCRGARACRVTSRRDTAPPHRATAPRHTAHSSSTWPRVCARIPSRAAVESQHCSCGRHRQVIGPMHRAESALTIAIEVNSRQATRQRYFTQSASLAPVAVVRRRRTPRRPHVLLGSHVARCTRAACLYFVEMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAHALAAPPHDIRARRAPAPAPALERTSVTLVLVAVAADGAPPGADFYKGFLFNGITSPHALPAPAPLPASTPSDYKTKKGMGTKRPGMSCTNCHTTTTSLWRRNAHGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKAERSLKTAVQRTTATGVKIENLMDGGGGAGGGAVGAGGGARSSLSMGYFMQHTMKLEEPPPAHAAHVAHSAHSAHSAHSAHSHAHALAQAHAHAHVLYEEGEYRRAGGDAERLERPTVVSMGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-