Basic Information

Gene Symbol
THAP3
Assembly
GCA_907164795.1
Location
OU015459.1:4534610-4556143[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.0046 0.38 11.8 1.0 1 23 350 372 350 372 0.98
2 11 0.008 0.66 11.1 9.8 1 23 379 401 379 402 0.94
3 11 0.069 5.7 8.1 1.5 1 23 406 428 406 428 0.97
4 11 0.056 4.6 8.4 1.8 1 23 433 456 433 456 0.97
5 11 0.013 1.1 10.4 0.3 1 23 460 483 460 483 0.92
6 11 2.4 2e+02 3.3 0.4 3 21 497 515 496 520 0.87
7 11 1.3 1.1e+02 4.1 0.4 2 23 575 597 574 597 0.94
8 11 0.0084 0.7 11.0 0.7 2 20 613 631 612 634 0.91
9 11 5.8e-05 0.0048 17.8 1.6 1 23 640 662 640 662 0.99
10 11 1.3e-05 0.0011 19.9 3.3 1 23 669 691 669 691 0.97
11 11 3.3e-05 0.0027 18.6 1.3 1 23 697 720 697 720 0.95

Sequence Information

Coding Sequence
ATGAGGTGCTGTGTCTCTGGATGTAAGAATGATTCAAGACATATTTCTAAATCTCAAGGGATTACATTTCACGTGTTTCCCAACGAAGCTACTCTACGCTCGTCATGGCTCCGAGCCCTCGGCAAGGTAGACTGGGAGCCAAAAGACCGGAGTGCAGTCTGCTCAGAGCATTTCCTCTGCGAAGACCTTTATGAGACCAAAAGCGGCCTGAGGAAAGTCAAAGTTGGTGCTGTGCCTTTTATATTACAGGATCCAAGCAACAGTGATTATGGAAAAACTGCTAGCTTAAAAGTATGCCGCGTGTGTCTTGTAATGGACTGCAAAATGTTTCCGATCAGCGTTTACAATCTGAAACAGGCTTACGAACATCTAACTGGAATTACGATACGCGCAGAAGAGAATCTACCTCAAAAGTTATGTTACGAATGTGCAGCGCGGCTTCTAAACAGTTACAAATTCCGATCGAAATGTCTTCGAGCCAATTCACTTATGTTGGAACTCGTCAAGAAACAGAGAACGTTAAACCAACAAAATATAAAAAGTATTAGCAGAGAAAACAGCCAACTATCGTCAACACTTATTCAAAAGCACTTAACTGATCATTATGACTATAAAATAGACTACGAAGAACCCAAAGTGGAAGAAGTGAAAGAGATAAAAACAGAAGAAGTTGACTATGAGATATTTATCACGGAAAATGAAGAGATGGAGAAAATAGAAGAAACAGAAAGACCAGAAGACATTGAGAGATCTGCGTTAGATGTTACAGATGATGTATCAGAGAAGAATTATTCCTCAGATGACAGCATACCGCTGGAGAAGACAAGGAAAAGGAAAAAGGGAAAGATTGAGAAGAAGCAAGTCGTAAAAGTTCGGAAGAAACAGATAAAACGCGACCCAACCGAGCCGAAGATCGACCGCCGCCGCAAGCCGTTCCTCAACGACGATCTCAACGAGACCCTGTTCACGATCGCCGACCTCACGTACGAGGAGCAGGTGGCGGAGATCGAGAAGAGGCAGGACAGCGCCAACTACAAGAACGCCGTGTTCAAATGCACCGAGTGCTACAAGGGGTTCTTGGACGAGGACGCTTACAATACGCACATGACGAGGCACACGAACCAATGCGGCGACCACTCGTGCTCGATATGCAAGACGCACTTCAAGCACCCGCACGCGCTGCGGAAGCACATCACGGCGCACCACACGCAGCGGTTCAGCTGCAACCTGTGCCCGTACGTCACCACGCACAGACAGACGGCGAGGCTGCACGAACGGTGGCACAAGGGCACCAAATACCAGTGTCCACACTGTCAGGATGAGTTTGTTAAATTCACAACATACATGGGACATATAAGGATAAAGCACCCTTCTGACTTTGTGTGTGAGTTGTGCGGTTACTCGTTCGTGAGTATGAAAGGAATTGAACTGCACAAGAAGCTGAAACATAGGTTAGAAGATGGACAGATACCGGAAGATGGGCCTTTCTGCGAGCTCTGTAATGTAAGATTCGTCTCATTAGAGGCCCACAGAAGGCATCTACTCGTCTCGGCGAGGCATACAGATACCGATGCGGACGGGCGGGAGGCGAACAAGCCCAAAAAAGGTAGGAAGTCAAAAGAAACGAAAGAGAGGGAGAAGAGGGCCAGAGAGAAGAACAGAGAACCAGAGGAGAAGAGGAGAGTGTACCCTAGTCAATTGAGGAAGGCCGAAGGACCTATACCTTGTGAACAATGTGGGCTGCAGTTGGAAGATTCTCGCGCGTACCACGGCCACTTCAGGAGGATGCACCCGGACAAGAACCGAACCAAGTACCCCTCGATGAAGTCGCCTTGCATGTGCGAGGTTTGTGGCAGAATGTTCCAGAGTTATGCCCTGCTAAAAGACCACCGCTGGGTGCACACAGGGGAAAGACCGTTCAAATGTGACTCTTGCGACAAGTCCTTCCGCATGAAGCAGCGTTTAGTCGCACATCGCCGCATCCACAGCCAGATGAAGGCGGCGTACGCGTGCACACTCTGCGGGAAGAACTTCTCGACGCACAGCAACAGGCAGCGGCACATGTTTATACACACAGGTCTGAAGCCTTTCAAGTGTGAAATGTGTGGTAAAGGATTCAAACATGCAAGCGAAAAGCGAGCTCACATAACATATGTCCATCTGAAGAAACCTTGGCCTAAGAGGACTAGAGGGAAGAGGAGGAGTGATAGTAGACAGGGTATGCCGTCACAGCAGCCGACAAGTGGAGGTGAGCTGGACCCCGTCCAACCAATATGGCCGCCGTGCGACCCCAAAATGGCCGACATCAACATGATAGAAGACAAGCCAATGTATTACACTTTGAAAATATAG
Protein Sequence
MRCCVSGCKNDSRHISKSQGITFHVFPNEATLRSSWLRALGKVDWEPKDRSAVCSEHFLCEDLYETKSGLRKVKVGAVPFILQDPSNSDYGKTASLKVCRVCLVMDCKMFPISVYNLKQAYEHLTGITIRAEENLPQKLCYECAARLLNSYKFRSKCLRANSLMLELVKKQRTLNQQNIKSISRENSQLSSTLIQKHLTDHYDYKIDYEEPKVEEVKEIKTEEVDYEIFITENEEMEKIEETERPEDIERSALDVTDDVSEKNYSSDDSIPLEKTRKRKKGKIEKKQVVKVRKKQIKRDPTEPKIDRRRKPFLNDDLNETLFTIADLTYEEQVAEIEKRQDSANYKNAVFKCTECYKGFLDEDAYNTHMTRHTNQCGDHSCSICKTHFKHPHALRKHITAHHTQRFSCNLCPYVTTHRQTARLHERWHKGTKYQCPHCQDEFVKFTTYMGHIRIKHPSDFVCELCGYSFVSMKGIELHKKLKHRLEDGQIPEDGPFCELCNVRFVSLEAHRRHLLVSARHTDTDADGREANKPKKGRKSKETKEREKRAREKNREPEEKRRVYPSQLRKAEGPIPCEQCGLQLEDSRAYHGHFRRMHPDKNRTKYPSMKSPCMCEVCGRMFQSYALLKDHRWVHTGERPFKCDSCDKSFRMKQRLVAHRRIHSQMKAAYACTLCGKNFSTHSNRQRHMFIHTGLKPFKCEMCGKGFKHASEKRAHITYVHLKKPWPKRTRGKRRSDSRQGMPSQQPTSGGELDPVQPIWPPCDPKMADINMIEDKPMYYTLKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00429076;
90% Identity
iTF_00290779;
80% Identity
iTF_00787721;