Basic Information

Insect: Hemaris fuciformis
Gene Symbol: -
Assembly: GCA_907164795.1
Location: OU015432.1:4298245-4303606[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 5.9 4.9e+02 2.1 0.1 3 20 66 83 64 85 0.89

2 11 0.12 9.9 7.4 0.9 1 23 237 259 237 259 0.95

3 11 0.55 45 5.3 0.4 3 23 283 304 281 304 0.93

4 11 0.00069 0.058 14.4 0.5 2 23 327 348 326 348 0.95

5 11 1.9 1.6e+02 3.6 1.0 1 23 352 374 352 374 0.89

6 11 0.0025 0.21 12.7 1.7 1 17 382 398 382 405 0.79

7 11 0.048 4 8.6 3.9 1 23 411 434 411 434 0.93

8 11 7.4e-05 0.0062 17.5 1.4 1 23 440 463 440 463 0.97

9 11 0.00014 0.012 16.6 2.3 1 23 469 491 469 491 0.97

10 11 1.3e-06 0.00011 23.0 0.4 1 23 497 519 497 519 0.98

11 11 3.8e-05 0.0031 18.4 2.3 1 23 525 548 525 548 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	5.9	4.9e+02	2.1	0.1	3	20	66	83	64	85	0.89
2	11	0.12	9.9	7.4	0.9	1	23	237	259	237	259	0.95
3	11	0.55	45	5.3	0.4	3	23	283	304	281	304	0.93
4	11	0.00069	0.058	14.4	0.5	2	23	327	348	326	348	0.95
5	11	1.9	1.6e+02	3.6	1.0	1	23	352	374	352	374	0.89
6	11	0.0025	0.21	12.7	1.7	1	17	382	398	382	405	0.79
7	11	0.048	4	8.6	3.9	1	23	411	434	411	434	0.93
8	11	7.4e-05	0.0062	17.5	1.4	1	23	440	463	440	463	0.97
9	11	0.00014	0.012	16.6	2.3	1	23	469	491	469	491	0.97
10	11	1.3e-06	0.00011	23.0	0.4	1	23	497	519	497	519	0.98
11	11	3.8e-05	0.0031	18.4	2.3	1	23	525	548	525	548	0.98

Sequence Information

Coding Sequence: ATGAGTGCAAATACTAGTAAAGGCCCTATAATTGACCCTGGCCTGTGTCGATGTTGTGGAATTGTGAAGAAATGTCGCCTGTTAAACGTAGAATACGAGTGGTGTGGACAAAAAGAAGTTTATTCTGATATGTTTCTCGATTGTTTTGGGCTATTGTTATCACACTTAGATGGACAAGCTGAGGAGCGGTTAATTTGTGCAAGTTGCGTTCTGAGGCTGAGAGATGCTACACAATTCCGCAAGCATGTGTTACAGTGTGAACAAATATTCCTCAAAAGCAAGATTCAAGCAGTTCCGGAAGATGTTAAACCCAAGACTGAGCTACTCATCAAAGAAGAAATGACAGATGATGACATTGCTGATTGCCATTCAAATGATGATGAATGTGTTAATGAAATGAAGGATCCTCCTGATGGTATAGATGAACAAATAAAAGAAGAAAATAAGGCTATCAATATTCCTAAACCTTTTGTTAAAAGAAAACTTGCTAACGACGACGATATCAAGGCGAAAAAGGAATTAATACTGCGAATGAAAAGAACACGAGAGAAGCTAAATAAACTAAAGGATAGAGATAAATCGGAAAGACCATTAGTGACGTTGGTAAAAAAGAAATCATATGTTGATAAGGAATACAATGCTGTCAACAATGCTATAACAATAGTTGAATGTTCATATGTGTGTCCATTCTTCACGATATACAGTGACTTCTACTGCATTTACTGTAAGGAAATGTTCACTAATGTTGACATACTCCGGACCCACACTTTAACACATGACCCCTCAACCTACAAAGATGTTATAGACGCGAAGAAGAACATTCTAGTTGATATTGATAGAATTGATTGTCGACTTTGTCATGAAAATATCAACGACATTGATTCTTTGAAAAGTCATTTAAGCAATGTTCACGGAAAGATGATATATAAGGAGACAAACAATGAGTTTTTAAAATTCAAATTGAAAAATAGCAAAATGAGCTGTACAGAATGTGGACGGAATTATAGTATATTCCAATCTTTGAAAAAGCATATGGCTGAGCATTTCGGCACTTACATCTGCGACGTATGTGGTGCACATTATTTTGAAGAAAGACTGCTGAACTTCCATAAAAAGATACACATCACAGAAGAAGAAAAAGACTTTACGTGTACAGATTGTGGCAAAATTTTCAAGTCGAAGAAAAGTCGGTATTTCCACATAGCTAGGATACACAAGAATGAACCAGCGTATCCCTGCAATAAATGTGACCAAGTATTTTTCTCTTACCATTTAAGATACAAACACAAAAGAGATGAGCATGGAGAGCACCGGGTGTTCCCATGCGAGAACTGTAATAAAGTATACGATAATAGGAAATCATTAAGAGAACATAACAGGAAGAGTCACTTGCTACTACTGAAGCATGAGTGCAGTCAGTGCGAAAGGAAATTTTACCTTCCGTCCCAGTTACGAGACCACATGACGTCACATACTGGGGAGAGAAACTTCAGATGTGAATACTGTGGCAGAAGTTATCCCAGGTTGAAAGCCTTGAAAGTACACATGGACTCTCACAATACAGAGAAGAGGTATAAATGTGAGTTGTGTTCGGCTTCATACACACAATTGAACAATTACAAGAATCATATGAAGACCAAGCATCAGCCTATGGAGAATGGCAACCAGTTCTCTTAG
Protein Sequence: MSANTSKGPIIDPGLCRCCGIVKKCRLLNVEYEWCGQKEVYSDMFLDCFGLLLSHLDGQAEERLICASCVLRLRDATQFRKHVLQCEQIFLKSKIQAVPEDVKPKTELLIKEEMTDDDIADCHSNDDECVNEMKDPPDGIDEQIKEENKAINIPKPFVKRKLANDDDIKAKKELILRMKRTREKLNKLKDRDKSERPLVTLVKKKSYVDKEYNAVNNAITIVECSYVCPFFTIYSDFYCIYCKEMFTNVDILRTHTLTHDPSTYKDVIDAKKNILVDIDRIDCRLCHENINDIDSLKSHLSNVHGKMIYKETNNEFLKFKLKNSKMSCTECGRNYSIFQSLKKHMAEHFGTYICDVCGAHYFEERLLNFHKKIHITEEEKDFTCTDCGKIFKSKKSRYFHIARIHKNEPAYPCNKCDQVFFSYHLRYKHKRDEHGEHRVFPCENCNKVYDNRKSLREHNRKSHLLLLKHECSQCERKFYLPSQLRDHMTSHTGERNFRCEYCGRSYPRLKALKVHMDSHNTEKRYKCELCSASYTQLNNYKNHMKTKHQPMENGNQFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00819532;
90% Identity: iTF_00291028;
80% Identity: -