Basic Information

Insect: Hemaris fuciformis
Gene Symbol: RREB1
Assembly: GCA_907164795.1
Location: OU015455.1:5472390-5476970[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.025 2.1 9.5 0.3 2 23 85 107 84 107 0.95

2 12 0.45 37 5.6 0.1 1 22 141 162 141 162 0.93

3 12 0.019 1.6 9.9 0.1 1 23 288 310 288 310 0.97

4 12 0.001 0.086 13.9 0.4 1 23 319 341 319 341 0.99

5 12 0.00064 0.054 14.5 2.0 1 23 347 370 347 370 0.97

6 12 0.0026 0.22 12.6 1.7 1 23 711 734 711 734 0.96

7 12 0.00022 0.018 16.0 1.3 2 23 929 950 928 950 0.97

8 12 0.022 1.8 9.7 5.3 1 23 956 979 956 979 0.97

9 12 0.066 5.5 8.2 2.0 1 23 1012 1036 1012 1036 0.94

10 12 0.044 3.7 8.8 0.1 1 21 1059 1079 1059 1082 0.89

11 12 0.0016 0.13 13.3 0.2 2 23 1122 1143 1121 1143 0.96

12 12 0.015 1.2 10.3 5.0 1 23 1149 1171 1149 1171 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.025	2.1	9.5	0.3	2	23	85	107	84	107	0.95
2	12	0.45	37	5.6	0.1	1	22	141	162	141	162	0.93
3	12	0.019	1.6	9.9	0.1	1	23	288	310	288	310	0.97
4	12	0.001	0.086	13.9	0.4	1	23	319	341	319	341	0.99
5	12	0.00064	0.054	14.5	2.0	1	23	347	370	347	370	0.97
6	12	0.0026	0.22	12.6	1.7	1	23	711	734	711	734	0.96
7	12	0.00022	0.018	16.0	1.3	2	23	929	950	928	950	0.97
8	12	0.022	1.8	9.7	5.3	1	23	956	979	956	979	0.97
9	12	0.066	5.5	8.2	2.0	1	23	1012	1036	1012	1036	0.94
10	12	0.044	3.7	8.8	0.1	1	21	1059	1079	1059	1082	0.89
11	12	0.0016	0.13	13.3	0.2	2	23	1122	1143	1121	1143	0.96
12	12	0.015	1.2	10.3	5.0	1	23	1149	1171	1149	1171	0.97

Sequence Information

Coding Sequence: ATGTTCGTAATCAATTGTAACATGTACTCTTTTGTTACAGAAATCAAAACAGAGGACATCAGCGAGGCGAAAATAGAAGCCGAGGAAATGGATAAAATGAAAATTGAACCACAAGAATTGCGTGTTCGAACCACCAGTATAGACAGCGACAACAGGTCGGACAGAAGTGACGAGGAAGACAGGAGGGCGCGTAAAAGGGCGGCATCCTCCTCCCCCTCCCCGTTTCCGATGGACAAAAGAATCGCTCGCTTGGAGTGCCCCAAATGCAGACAGCGATTCGACTCACTCAGTGCGTACGACATCCACCGCTTCACAGCTCATGGCGATGAAGTCAGATCAGGCTACGACGATGTCAACTACGAATACTCTAAGCGTGTCCCGGAAATAGTAAGGAACTCGCAGATGATGCCGGAACAACGTTTCCGTTGTGACTCCTGCTCCCGAGAATTCCCCACTGTTCCTGCTTTGGACATTCACAAGAAAACCTGCACAGCGCGCGTTGCAAGCCCCGAACGCATCAGAAGAGAGGATTTCTTCGAAAAATTAGATCTTAGAAACAGGACGTTTCCGATTCCTGGCACTTTGACCCCACCGATGGAGATGTTCGCGCCTAAGTTTGAAGATGGACATCTTGCCACAAATGGCATGCGTCATATCGATGCCGCACGAGACTTGGCTGATATTCAATCCATCTTGAATGTCACATCAGCTGGCAGCCTGTTGGAGAGACTAACGGGCACTAGAGTTCCTTTGGAAAGCACCGTGCTGACTCCGCCCGACACTATAATCAAAGAAAGAGAGCCAGAAGAAACACAAGATAACTTTGCAGCTGAGTTCAGAAGAATGAAATTACGGGGAGAATTTCCTTGCAGATTGTGTCCTGCTAAGTTCCCAAATCTCAGAGCATTGAAAGGGCATAATAGAGTGCACCTCAGTGGAACTGGACCTGGTCCTTACCAATGTAACATGTGCCCCCACGCTTCTCTCGATAAGGCGGCTCTTGTCAGACATATGCGCACCCACAATGGGGACCGTCCGTACGAATGCGCTGTTTGCAATTACGCATTTACTACCAAAGCAAACTGCGAAAGACACTTGAGAAACCGTCACGCTAAAGTGACGCGCGAGGATGTTAAGCGCTCAATTATTTACCACCCGTCAGAAGATCCCAATAATGATGAAGTCAATTCTAAGCTCGCTCGAGATGATGTAAAAAGATCATTAGCATTCCACACACCTGAGGTCGACAGGAGGAGTGACAACACTGGTCGCGTTACGCCTCTCACTCATTTCACGCCTAGTTTCATTACTGATAGGCATCCAGTAGCAGCCCTTGCAACCAAACCAATACCTGAAGCTCCAATAACCCCCAGGGAACCAGACCAACCTGTGCCAAGAATAAAAGTGAAAGGCATTGGCCAGTTGACTCAAATACCTGAGTTTAGACCGCCGGAGGTAGCGTACAAGCCAAACGAAGTTCAGGCGGATGCCTACGATGAGGAAGCCCCAGTGGATCTGAGTACAAGTGACAGTTGCGACGTATTAGATTTAAGTAAAAAGAAACGTGATGCTGATGAAGAGCCTAAAGCTCCACCCCGTCCATCCTTTGAACCGGACCCTGCAGCGGCTGCCGCCTCAGCGATTGAAAAGACAAGACTCTTGTTAGCCCACCAAAGATTCTTTGAAACAAACTTTCCTAAAATAGACCCTGCTTACTACGCCACGCATCTTTCTCAAATATATGCGGGTACTGTGCCTGGTCTCCCAGCACTTCCGATTCCACCTTCCTTTCCTTACTTTCTTCAACCGCCGTTTTTTCCTAACGCATCCGATTCACAAGAACTTGCCGAAATAAAACAACGCATTCATAAAGAAATAATTCGCAGCCTGAGCATGTCTGGTGGGAGGCTAGTTCCTAACGAACAGGAAGCTCAGCCGAAGCAGGAGTCGGAAGAGGAAGAACAGAAACCTATCCCACAATCTGTGTCGCCAGCGCTGTCACCACACACTGAATCTCCACGTCCTCTGAGCAGCAATCTCGTACCGCAGACAGATTCTGTAAAAATGGTCATCAAAAACGGTATTCTCATGCCAAAGCAGAAGCAAAGACGATACCGTACTGAAAGACCATTCTCATGCTCTCAGTGCACAGCGAGGTTCACCCTCCGTTCAAACATGGAACGCCACGTTAAGCAACAACATCCTCAGCATTGGAGTGTTCGGAGACCAGCACCAAGGGCTCCTCCGCCATACACTACACCGGACAGACTGACCGATAGTGTCAAATACGCTCTCTTAGCCCGCCACCTTGAACGTCCTCTGCAACAACCAGAGCGTTCGCCAGTTCGTCGTGATTCTGACGAAGTTGCTGACAACGAGGAAGATGAAGATGACACCCTCGTTATTGATGAAGAACCTGAGCAGGACATGAAGCCTGAAGATCACACAGCGGCTCGCAGGGCTGCTGCTGAAATACTGATGGCGACGTGTCAACAAGAAATGAACAAGGATTTTGATCTTAAAATTGCTGGGAATCTGATTAACAAACCGATCCCAATCCCAGCAGAAAAGTCTGAGGCTGGGACTGATCCTATCCCAACTGGTCAAGAGTCACTTCCGATACCCGTAGTACCAGCACGCAGCGATGAGGAAGAAGATGAAGAGGGTTTAGTGGCTTCAACTAGCGAGGGGAACAACTCTGGAAGCGATGAAAATAAGTCGGAGTCAGACACCACTCAACCACCAAAGAAGAAGTCTGCCTATAGTCTGGCACCGAACCGCGTATCCTGCCCTTACTGCCACCGAAAGTTCCCGTGGTCCTCATCACTTCGCCGCCACGTACTAACGCATACCGGACAGAAGCCATTCAAGTGCCCCCACTGCCCACTGCTCTTCACCACCAAGTCCAACTGCGACCGCCATTTGCTCAGAAAGCACGGAGGTTCTGCAAGGGCTATACTGGCTGAGCCGATTCCTGATGCGATTTCGCCCCCTCAGCCCTCGCATGACGCACGCACCGTGCCCGAAAGACCTTACAAGTGCACCTCGTGTCCCACCAGCACTTTCTCCTCTATGGAGACATTGAAGAAGCACATGTCGTCGCGCCACGGCTCGGAGTCCCGACCAGGGTCTCCCAACCCTGAGGTTGATGATAACTCCGACTGCAGCCTGGTCTTCAAGTGCCATTTGTGTGAAGCGTCATTTGGGGATAGAAGCGCCGCGCTGGCACATTTGGGCGCGGCTCATGCCACGGAATATGAGCAGCTGGTGAGCAAGGGAGCCTTGGACGCCGCCAGCGACCGCAGTGAGAGCGCTGATGATGATGAAAGGGGAAAATTCCCTGATCACGCTAACAGAAAGGTGGTGTGCGCCTTCTGCGTGCGTCGTTTCTGGTCTGCCGAGGACTTGCGGCGCCACATGCGGACCCACTCGGGGGAAAGACCGTTCGCGTGCGACCTGTGCACGCGCCGGTTCACGCTCAAGCACAGCATGCTGCGACACCGCAAGAAGCACCGCGAGGAGGTCACTGATGACGAGGACCCCTCCCCCCCTCACACATCCGTGGAGGCACACGCCGTTGCCAACGGCTACCGCTACCAAGACGACGACGGCTCCGGCAACGAGATACCAAGCAACGTAAACAACAACAACTCACCGCCATCTGGCCCGTACGAAAAGAAACTAAAGCTGGACATGACGTCACGCAAATATTCATCGGAGGCCGAAAACGACGGAGAGAATGGCACCGACCTGATCGGCAAACTGCTTGGGATCCCGGACAAAACTATCAACAAACTGCTGTCGTCCGCCTCCGCTGAGGCCGCCAAAATCCTCGGCGTGAACAAATGA
Protein Sequence: MFVINCNMYSFVTEIKTEDISEAKIEAEEMDKMKIEPQELRVRTTSIDSDNRSDRSDEEDRRARKRAASSSPSPFPMDKRIARLECPKCRQRFDSLSAYDIHRFTAHGDEVRSGYDDVNYEYSKRVPEIVRNSQMMPEQRFRCDSCSREFPTVPALDIHKKTCTARVASPERIRREDFFEKLDLRNRTFPIPGTLTPPMEMFAPKFEDGHLATNGMRHIDAARDLADIQSILNVTSAGSLLERLTGTRVPLESTVLTPPDTIIKEREPEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDDVKRSLAFHTPEVDRRSDNTGRVTPLTHFTPSFITDRHPVAALATKPIPEAPITPREPDQPVPRIKVKGIGQLTQIPEFRPPEVAYKPNEVQADAYDEEAPVDLSTSDSCDVLDLSKKKRDADEEPKAPPRPSFEPDPAAAAASAIEKTRLLLAHQRFFETNFPKIDPAYYATHLSQIYAGTVPGLPALPIPPSFPYFLQPPFFPNASDSQELAEIKQRIHKEIIRSLSMSGGRLVPNEQEAQPKQESEEEEQKPIPQSVSPALSPHTESPRPLSSNLVPQTDSVKMVIKNGILMPKQKQRRYRTERPFSCSQCTARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYTTPDRLTDSVKYALLARHLERPLQQPERSPVRRDSDEVADNEEDEDDTLVIDEEPEQDMKPEDHTAARRAAAEILMATCQQEMNKDFDLKIAGNLINKPIPIPAEKSEAGTDPIPTGQESLPIPVVPARSDEEEDEEGLVASTSEGNNSGSDENKSESDTTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPIPDAISPPQPSHDARTVPERPYKCTSCPTSTFSSMETLKKHMSSRHGSESRPGSPNPEVDDNSDCSLVFKCHLCEASFGDRSAALAHLGAAHATEYEQLVSKGALDAASDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCTRRFTLKHSMLRHRKKHREEVTDDEDPSPPHTSVEAHAVANGYRYQDDDGSGNEIPSNVNNNNSPPSGPYEKKLKLDMTSRKYSSEAENDGENGTDLIGKLLGIPDKTINKLLSSASAEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01010754;
90% Identity: iTF_00291015;
80% Identity: -