Basic Information

Insect: Hemaris fuciformis
Gene Symbol: -
Assembly: GCA_907164795.1
Location: OU015441.1:6688246-6690736[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0064 0.53 11.4 0.1 2 23 161 182 160 182 0.97

2 11 4.4e-05 0.0037 18.2 0.6 2 21 210 229 209 230 0.95

3 11 0.00059 0.049 14.6 0.4 1 23 281 303 281 303 0.99

4 11 0.5 41 5.4 1.1 1 19 309 327 309 330 0.85

5 11 0.013 1.1 10.4 0.1 2 21 333 352 332 353 0.94

6 11 0.0023 0.19 12.8 1.0 2 23 375 396 374 396 0.96

7 11 5.2e-05 0.0043 18.0 0.3 1 23 403 425 403 425 0.96

8 11 0.00035 0.029 15.4 2.4 2 23 432 453 432 453 0.97

9 11 0.00011 0.009 17.0 6.8 1 23 459 481 459 481 0.97

10 11 0.00038 0.031 15.3 6.4 1 23 487 509 487 509 0.96

11 11 0.0025 0.21 12.7 3.6 1 23 515 538 515 538 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0064	0.53	11.4	0.1	2	23	161	182	160	182	0.97
2	11	4.4e-05	0.0037	18.2	0.6	2	21	210	229	209	230	0.95
3	11	0.00059	0.049	14.6	0.4	1	23	281	303	281	303	0.99
4	11	0.5	41	5.4	1.1	1	19	309	327	309	330	0.85
5	11	0.013	1.1	10.4	0.1	2	21	333	352	332	353	0.94
6	11	0.0023	0.19	12.8	1.0	2	23	375	396	374	396	0.96
7	11	5.2e-05	0.0043	18.0	0.3	1	23	403	425	403	425	0.96
8	11	0.00035	0.029	15.4	2.4	2	23	432	453	432	453	0.97
9	11	0.00011	0.009	17.0	6.8	1	23	459	481	459	481	0.97
10	11	0.00038	0.031	15.3	6.4	1	23	487	509	487	509	0.96
11	11	0.0025	0.21	12.7	3.6	1	23	515	538	515	538	0.97

Sequence Information

Coding Sequence: ATGACGTCGCTGTATTGTCGTTTTTGTGCTGAGACAAAATCTTTAAAAGAAGTTAAAAATTTATCTAACCCTCTTCTTAATGAAGTACAAGAAAAAATAAATATAATAAAAATAGATTTCGTAAATTTTTCCAATAAGATATTACCTGAAACTATTTGTAATTTATGTTATAGTAAATTAAGCATGGCCTATGACTTCTTCCTAAAAGTTAGGATGTCTCAAGATATCTTAATGGAAATATTTACAAATGAACCTAAATTAGAATACTATGGTTATTCAGATCATTTTGCTGATAACAGTAGCGTAAAACTTGAAGAAGAACTTCCTGAATGTGGAGACAATAACAAACACCAGGTTTCAATTCAGTCATCTATGTGGTCTTCATATGAATGGGTGTGTGGGTGCTGCAACTTGAGGGTCAGTTCATTGACTGATATCCGAGAACATTGTAAAGTGAATCATGTTATTTGCTGCAGTTGGCAGTGCATGGATTGTCCAGAGAGAATTGATGAGTATGATGATTTCATAAAGCACATAAGGACACATAGGAGTGAGTTGATAGATTATTGTGAAGTCTGCAACCTCAAGCTGGGGGATGGCCACTCACATAAGGATATAAATCAGCAATATTGCAAATTCTGTGGAGAGACATTCAAGAGTTCAGACAAACTTTTACAACACATCAGGTACTACCAAAAAGGGAATGTTTCTCAAAGGAAACAGGATACCACAGAATCCTGGAGTAGTTATCCATGGGCATGTAAACACTGTGACATGATAATGGCCAGTATAGAAGTACTAAGGGACCATTCTAAGCAAGTACATGGAAAATGTAATGGATTTAAATGTGCTGATTGTGACAAGAATTTGAATAATTTTGAAGAGTTTATTGAACATGTAAGAAGCCATAGAAAGGATCTGAGGTATCAATGTCAATACTGTGATACAGAGCTAACAAACACAACACACACAGACCAACATACCACAAACTACAGTCAGTGTGACTCCTGTGGTGAACTATTCCAATACAAGCGGGATCTTCAAGCACATATATCAAGTTACACAAACAAAACCAAATGCACACATCTTACCAAAGCAAAAGAAATCACGGAAGAAGACTTGACTTGTGTCTCTTGCGGTAAATTCGCTAAGAGTCTCAAGTCACTTCGATCTCACATGAAACTACACACAGAGAGGAATAGGGACTACACTTGTGATAGATGTGGAAAAGCATTCTTTACTAAAGCTACTTTGTCGGCTCACAATATTATACACCAAAACCCAGACCCTGAAGTTTGTAAGATATGCAATAAGACATTTCTAACCCTCACTAGACTCAAAAAACACATAAAAACTCATTACAACGAACGGCCTTTTCGGTGTGAAGTCTGCCATAAGTGCTTCGGACGTAAGGAGCATCTCAAAAGCCATGCAGTGACCCATACAGATGACATGCCGTACCACTGTCAGTACTGCGAAAAGTCATTCAAACATAGCAATGGTTTGAAAATACATCAGTATCAACATACTGGCGCCAGACCCTATTCCTGTGAGCTATGCAATATGTATTTTGCCAATTGGTCCAATTGTAACAAACATCTTAAGAGAAAGCATGGCACTACGCTAGCCAAAAGCGTGATGACGCCTCAGGGTAAAATGCCAATTAATCCGAAGACAGGGAAACCTAAAAAGCTGAAGGATTTAGAAACTGTCAAAGATTGGACTGAGAGTATCATGGCGGGTGTTAAGGGTCGGAATGGGTTGGAAGGTTAA
Protein Sequence: MTSLYCRFCAETKSLKEVKNLSNPLLNEVQEKINIIKIDFVNFSNKILPETICNLCYSKLSMAYDFFLKVRMSQDILMEIFTNEPKLEYYGYSDHFADNSSVKLEEELPECGDNNKHQVSIQSSMWSSYEWVCGCCNLRVSSLTDIREHCKVNHVICCSWQCMDCPERIDEYDDFIKHIRTHRSELIDYCEVCNLKLGDGHSHKDINQQYCKFCGETFKSSDKLLQHIRYYQKGNVSQRKQDTTESWSSYPWACKHCDMIMASIEVLRDHSKQVHGKCNGFKCADCDKNLNNFEEFIEHVRSHRKDLRYQCQYCDTELTNTTHTDQHTTNYSQCDSCGELFQYKRDLQAHISSYTNKTKCTHLTKAKEITEEDLTCVSCGKFAKSLKSLRSHMKLHTERNRDYTCDRCGKAFFTKATLSAHNIIHQNPDPEVCKICNKTFLTLTRLKKHIKTHYNERPFRCEVCHKCFGRKEHLKSHAVTHTDDMPYHCQYCEKSFKHSNGLKIHQYQHTGARPYSCELCNMYFANWSNCNKHLKRKHGTTLAKSVMTPQGKMPINPKTGKPKKLKDLETVKDWTESIMAGVKGRNGLEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -