Basic Information

Insect: Hemaris fuciformis
Gene Symbol: -
Assembly: GCA_907164795.1
Location: OU015459.1:4673839-4677956[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.34 28 5.9 2.5 3 23 27 48 25 48 0.95

2 7 3 2.5e+02 3.0 1.5 5 23 165 184 162 184 0.93

3 7 0.00079 0.065 14.3 0.4 1 23 210 233 210 233 0.96

4 7 8.7e-07 7.2e-05 23.6 1.8 1 23 239 261 239 261 0.98

5 7 3.8e-08 3.1e-06 27.8 0.3 1 23 267 289 267 289 0.98

6 7 2e-06 0.00016 22.4 6.4 1 23 295 317 295 317 0.99

7 7 2.9e-06 0.00024 21.9 6.3 1 23 323 345 323 345 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.34	28	5.9	2.5	3	23	27	48	25	48	0.95
2	7	3	2.5e+02	3.0	1.5	5	23	165	184	162	184	0.93
3	7	0.00079	0.065	14.3	0.4	1	23	210	233	210	233	0.96
4	7	8.7e-07	7.2e-05	23.6	1.8	1	23	239	261	239	261	0.98
5	7	3.8e-08	3.1e-06	27.8	0.3	1	23	267	289	267	289	0.98
6	7	2e-06	0.00016	22.4	6.4	1	23	295	317	295	317	0.99
7	7	2.9e-06	0.00024	21.9	6.3	1	23	323	345	323	345	0.98

Sequence Information

Coding Sequence: ATGTCCGCATTCCTGAATATTAAACCGCATCCGAAAATAAAGAAAGAAGTTTTAGACGATTCTGATGATGTCGTCCACTGTAGACTCTGCTGCAAAGGGTTTGCAAGCACCACAGCCCTCAACAACCACGCTCGGATGGAACATATAGACTCCTATGCCACTGGAGACCCTCAAGTTTGGACCCAGATGCCAAGCATCACTCCACCTGTTAAGCATATATCAAACGCAAAACTCACAATTGACGAGAATTTAGAGAAGAAGAGGAAAGAGCAACTGCTTTCTTCGCTTCAGCCGTCCAACATAATGGGCCTGGCGTCAAACGATGTGAATTATATAATAATCAAGTCTGAAGACCCTCCTGTCGTGAAGAAGAGAAAGGCTGAGAGGAAAGAGGAGAAGGTGGAGAGAGCCGCGCCGAAGAAGGAGAGAGAAGCGCAAGCCATAACTGGTCCGTTCGAATGCGTGGAGCCATCGCGGCTAGTAGGAGACGGGATCTGTCACCAAATGTTCTTCTCGTGCTGCGAATACTCCCTACATTACCGTGATGAACACACGCGAAGACGGAACTGGCTGAGATGTCAAGTGTGCGAGAAACCACTCGCATGCCAGGGGGAGGAGCTTGCGCCTTTCTGCTGCAAGGTATGCGGCGAAGGTTTCCAGAAGGAGGAAGATCTGAACGAGCACGCGTCAACGGCGCACGTGAAAATAAAGCCGTTTGAATGTAACATCTGTCACAAGAGATTCACGCAACAGGGTGGAGTACTCCAACACATGAGGATGCACACCGGTGACAGGCCATTCCCCTGCACCTACTGCCCAAAAGCCTTCACACAGAAGTCAGGACTCGAGCAGCATCTCCGTATCCACACAAAACACAAACCTTACCGCTGTGTGGTCTGCACCAAGAGTTTCTGCCAGTCAATACACTTGAAACAACACATGAGGACCCATACGAATGTTGCACCGTTCCAATGTGGGATATGTGATAAACGGTTCAAGCAAAGCAGCCATTTAAACTACCATTTGAAACATCACAATCCAGCGAGCATGACAGAAGAGCAACGGGCAAAGTATTCAGAACTCATCGGGATGATTAGCAGGGAGACTGTAGAAGTTGAAGTTATACAAAGCCAACCAGACTTGCATATGGAGGAGATACAAGTAGAGGAACAAGTTATAGCCGAACAGAGCATAATGGACGACTCTAACAGTACTTGGTGTATAAAATTAGAGTGA
Protein Sequence: MSAFLNIKPHPKIKKEVLDDSDDVVHCRLCCKGFASTTALNNHARMEHIDSYATGDPQVWTQMPSITPPVKHISNAKLTIDENLEKKRKEQLLSSLQPSNIMGLASNDVNYIIIKSEDPPVVKKRKAERKEEKVERAAPKKEREAQAITGPFECVEPSRLVGDGICHQMFFSCCEYSLHYRDEHTRRRNWLRCQVCEKPLACQGEELAPFCCKVCGEGFQKEEDLNEHASTAHVKIKPFECNICHKRFTQQGGVLQHMRMHTGDRPFPCTYCPKAFTQKSGLEQHLRIHTKHKPYRCVVCTKSFCQSIHLKQHMRTHTNVAPFQCGICDKRFKQSSHLNYHLKHHNPASMTEEQRAKYSELIGMISRETVEVEVIQSQPDLHMEEIQVEEQVIAEQSIMDDSNSTWCIKLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00291023;
90% Identity: iTF_00291023;
80% Identity: -