Basic Information

Insect: Hemaris fuciformis
Gene Symbol: -
Assembly: GCA_907164795.1
Location: OU015457.1:2704424-2707220[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.1e-06 0.00026 21.8 0.6 1 23 289 311 289 311 0.98

2 12 2.3 1.9e+02 3.3 0.2 5 14 360 369 358 373 0.86

3 12 0.00024 0.02 15.9 1.5 1 23 387 410 387 410 0.97

4 12 0.0003 0.025 15.6 1.3 1 23 414 436 414 436 0.98

5 12 0.0024 0.2 12.8 0.5 2 23 458 480 457 480 0.93

6 12 0.008 0.67 11.1 2.4 1 23 484 507 484 507 0.97

7 12 0.016 1.4 10.1 0.2 2 23 530 552 529 552 0.93

8 12 0.00016 0.013 16.5 2.4 2 23 563 584 562 585 0.95

9 12 0.0022 0.18 12.9 1.5 2 23 601 622 600 622 0.96

10 12 0.0047 0.39 11.8 0.3 1 23 628 650 628 650 0.96

11 12 2.1 1.7e+02 3.5 4.2 1 20 656 675 656 680 0.90

12 12 0.23 19 6.5 0.1 3 23 736 756 735 756 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.1e-06	0.00026	21.8	0.6	1	23	289	311	289	311	0.98
2	12	2.3	1.9e+02	3.3	0.2	5	14	360	369	358	373	0.86
3	12	0.00024	0.02	15.9	1.5	1	23	387	410	387	410	0.97
4	12	0.0003	0.025	15.6	1.3	1	23	414	436	414	436	0.98
5	12	0.0024	0.2	12.8	0.5	2	23	458	480	457	480	0.93
6	12	0.008	0.67	11.1	2.4	1	23	484	507	484	507	0.97
7	12	0.016	1.4	10.1	0.2	2	23	530	552	529	552	0.93
8	12	0.00016	0.013	16.5	2.4	2	23	563	584	562	585	0.95
9	12	0.0022	0.18	12.9	1.5	2	23	601	622	600	622	0.96
10	12	0.0047	0.39	11.8	0.3	1	23	628	650	628	650	0.96
11	12	2.1	1.7e+02	3.5	4.2	1	20	656	675	656	680	0.90
12	12	0.23	19	6.5	0.1	3	23	736	756	735	756	0.97

Sequence Information

Coding Sequence: ATGGCGACTGAAAACATTACAATGGAACTAAATGAATATACAGAAGAGGAATTAGATATCAAAGAAGAATTTGACGATGAGCAATTACACATCAAATCAGAAATTGAAACCCAAGATGACATGGAAGAGAATATACCAAATGATAATCCATTTCAAAACATCCAAGTACATGTGAAACAAGAAATTCAACCAACGAACACTGAAAAAGAGATTCCGCACACACAAAACGAAGTTGTTCCTATAAGAATCCGATCAGCTGAAACTATACAGAATATGATGAAGCCAGATATATATGGGAAATCTCCATCGCCTGTGGGTCTGCTTGAGGAAAATGAGTTCATAAAACAAGAAGAAAGCCATGAAATAATTACGTGTGATGAAGTTATATCTTATGACTATCCAAATTTCGATGACAGCATGGACAGTAATGAGGCAGTCGCTTTAAGTAAAGTAGAGGCGTGTTTGCAAGACGACAATCTTATTAAAAACGAGATGCATGGACATATGGATGATGGCCACAATTACTACAAAGTCATCAAAAACGAATCGGATCTGACCGTAACAGAAACTCATCTGATATCAAACAAATTAATAAACACAACATCCACAATAACCAACCCTAGAGATGGGCTCATAGAATCGCAAACCACGAAAACTCTAGTAATGGAAATACGGCCAATGAATGAAACGGCAATACCATTGAAACTCGGCAACCCGGAAGAAATACTACCAACTAATGATAACTATATGGATTATGACGACGCGTTCCAACTGAATTCAATAACAGGGAATGTTTTATCTTTAGAACAGCAAGCGTATGGCCTGCTGCAGACGAAGTCAGATAAATATTCAAGGAGCAAGAAATACTCGTGCCCGAAATGTTCAAACGCATACACGCGAAATGCACAATTACAGAGGCATTTGCGAGTTCACGATAGTATAGAGAAACGAGCGCTCGGTATCATAAAAGGTGTTAAAACCAGAATACAAAATAGAAATAAAAAACTCAAGTTGGAAGATGATGATGCGGAAGAAGATAGTAAACAGCAATTGTTGAAAAAGGAAGGCTATGAGTGCACTTGTGGCAAAATCTTTCGCAGGAGAAGTAGAATGGAGACGTGTCTTAGATCGCATAATTTGTTTGATGACACAAATTATTACCCATGCATGACTTGCTCCAGACAATTTAAGAGTAAAGAGGAGCTCATATCACATAGAAAGAGGATGCATAGAAAGAGATTTCCGTGCAAATTTTGTCCGACAGACTACAATACTAGAAAGGAATTGTTCAAACATTTACAGATACATCAAAAAGTTCAGCTGATGGAGTACAAAGTTATATCGGAGGTTGTGAAGAGTAAACAGAAGTTGAAATGTTTCATGTGTTCCAAATCGTATAACGAGTTGTCAGAGTTGAAATCTCATGTTATGGATGATCACAAAGAGCCGTACAGCTGTCCCCATTGCAGGAGAACGTTCCCAAAAATAATTGATTTTGGTAATCACACGAAAACGTACCATCCAGAAGTGGAATGCCAGTCTGTTCTCGACGTCCTAGAAGCGTTTTCGAAGCTCGTTAAAGCTTGGAAGTGTGAAGAATGTGGCCTCCAGTTCCACGAAGCTGACAAATTAGCGCTTCACCAGATAGAACAACACAGTCCTGAATTGAAGGCGGATCCGCAGCTCCAATGCGCCGATTGTCGAAGAGTTTTCTTCACACAAAAAGGCTTAACGTCCCACAGGAGAGTTCATCACAGTACAGAAAGTGTAGAAGAAGCACAGCCAGAAGAAACGGGAGTGATGTGTGTCGAGTGTCGGAAGATGTGCAAGGACATGAATGCATTAACATCACATATGCGACTACATTCACCAGATAGGAAGTATCCGTGTAAATTCTGCGACTTCCGCTTCGCCACACCAGAGAAGAGGAAAGCGCATGCAGAAATCCACACTGGAATTATGAAATACGTGTGTTTTATATGTGAATATCAGTGCAGTTCAGAAAATCGACTAAAACAACACAAGTTTTCAACAAAACACCGCGATATGAAGGAGTTTTTGATGTCAGGCGCTCATTTACTTTCGCCGTCGTCGTCGTCAAAAACGGAGACGAAAGAGCCGAAGAAAGAAGAGAAGTCAGTAAAGAAGAGAAAAGGGGAGAGGGATAGGAAAGAGAGCAATTCATCGGACAATTCTGAAGTTGCCTGTGATATATGTGGTGACAAGTTCCCGTCAGAGAGTGTTATGTTGGAACATAAACAGACTCATCCGTTCATTGAGTTTCCAAATGATGATAAACCAAGTAGAATATTCTTTAAGTGA
Protein Sequence: MATENITMELNEYTEEELDIKEEFDDEQLHIKSEIETQDDMEENIPNDNPFQNIQVHVKQEIQPTNTEKEIPHTQNEVVPIRIRSAETIQNMMKPDIYGKSPSPVGLLEENEFIKQEESHEIITCDEVISYDYPNFDDSMDSNEAVALSKVEACLQDDNLIKNEMHGHMDDGHNYYKVIKNESDLTVTETHLISNKLINTTSTITNPRDGLIESQTTKTLVMEIRPMNETAIPLKLGNPEEILPTNDNYMDYDDAFQLNSITGNVLSLEQQAYGLLQTKSDKYSRSKKYSCPKCSNAYTRNAQLQRHLRVHDSIEKRALGIIKGVKTRIQNRNKKLKLEDDDAEEDSKQQLLKKEGYECTCGKIFRRRSRMETCLRSHNLFDDTNYYPCMTCSRQFKSKEELISHRKRMHRKRFPCKFCPTDYNTRKELFKHLQIHQKVQLMEYKVISEVVKSKQKLKCFMCSKSYNELSELKSHVMDDHKEPYSCPHCRRTFPKIIDFGNHTKTYHPEVECQSVLDVLEAFSKLVKAWKCEECGLQFHEADKLALHQIEQHSPELKADPQLQCADCRRVFFTQKGLTSHRRVHHSTESVEEAQPEETGVMCVECRKMCKDMNALTSHMRLHSPDRKYPCKFCDFRFATPEKRKAHAEIHTGIMKYVCFICEYQCSSENRLKQHKFSTKHRDMKEFLMSGAHLLSPSSSSKTETKEPKKEEKSVKKRKGERDRKESNSSDNSEVACDICGDKFPSESVMLEHKQTHPFIEFPNDDKPSRIFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00428447;
90% Identity: iTF_00291003;
80% Identity: -