Hfuc001297.1
Basic Information
- Insect
- Hemaris fuciformis
- Gene Symbol
- ZEB2
- Assembly
- GCA_907164795.1
- Location
- OU015459.1:5491437-5504357[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00056 0.047 14.7 2.5 1 23 229 251 229 251 0.98 2 11 8.4 7e+02 1.6 0.3 1 21 258 278 258 281 0.86 3 11 0.00027 0.023 15.7 1.2 1 23 312 335 312 335 0.97 4 11 0.12 9.7 7.4 0.9 1 23 339 362 339 362 0.91 5 11 0.013 1.1 10.4 0.1 1 19 370 388 370 391 0.94 6 11 0.09 7.5 7.8 1.1 2 23 404 425 403 426 0.94 7 11 0.0029 0.24 12.5 3.7 2 23 432 454 431 454 0.96 8 11 9.7e-05 0.008 17.1 1.0 2 23 471 492 470 492 0.97 9 11 8.2e-07 6.8e-05 23.6 1.9 1 23 498 520 498 520 0.99 10 11 4.3e-05 0.0036 18.2 2.2 1 23 526 548 526 548 0.94 11 11 1.7e-06 0.00014 22.6 2.7 1 23 554 577 554 577 0.98
Sequence Information
- Coding Sequence
- ATGGAGGAAATATTAATGTGTAGAGTGTGCCTTGCAACCGATGTAAGAATGTATAATATGCACACGTATGATCTTGTCAGAGCCTACGAGAACATTACCGGGTTTAAAATGACAAAATTACGAAATCTACCGGTTCACATGTGCACGTTCTGCACTGCTGTGCTATTGAAATGCGTATCATTTAAGGAGAGGTGCGGGAGAGCTGTGGACGTGCTCAACTCCATGCTCATATCTTCAGGATTGGTTCCACATTCGGATATCACCAACATCAGAAGATTAAACAAGCTAGAGCTGCCCTACACAAGTCAAGTTGAAGTTCTCCTCATTAAAGAAGAAGACGAGGATACGGACAGGGTGGAGTATGATGTTGATGATGGTGACGACAAGTCCAGGATGTTTGATGATGAAGACATCAATGTGAACTGCGGCGGTGATGATGGGGTTGCAGCATATGCTGATGTGTGTGATGACTCAACGAGCATCGCAGACATAAAAGACATTGATATTATTGAAAATGAACCGGAAATGATAAAGATTGAGAAGGAGTTGTCTCCAGCAAAAGAGAACATAGTGAAAGAGTTAGAGTTTGAGCATATAGACATAGAGTTGATAACTTTGTCTAAAGAGGAACAGATTCAAGAGGTGCAAGCGAGGAAGTTTTCAGTCAATTACCAGAACTCTATGTACAAATGTGATAAATGCTTTAAAGGTTTTATAACGGATGCTACGTATAAAAATCATATGTACAGACATGATCCGGCGTCAGGCGCGCACTCGTGCGAGGCGTGCCACACTCGGTGGGCGAGCGCGCGCGCCCTGCGCTCCCACGTGGTCGCTGCGCACGCGCGCAAGTTCGTGTGTCGGTTGTGCGCGCATGTTACACGCTCCGCGAACAGCGCCAGAGAACATGCTCATTGGCATAACGGCCACACGTTCCGTTGCAACGTTTGCGGTTCGACGTTCGCGAAATCGACGAGCTACCTCACGCACCTGCGGCTGCAACATCCGTCCAAACACCGCTGCGAACTGTGCGGCGAATCGTTCCTGGGCGTCAACGGGCTCAAGATACACAAGAAGAAGTCGCATAGAAACAGTCAGTCCGAGGAGTTCTCGTGCGAGATGTGCAAAGCAGTGTTCCATACTCAAGAAGCGCTTTCGGTCCACGAGTCTCTGAGGCAGGAGAACCTGGGCTGCGGTAGTGGACTCAAGCCGTGCGCTCAATGCGGGCACAGTTACCTCGACGAGGAGAGGCTACAGGAGCACATGAACATCCACCACAGGAAGAACGCCTTAAAATGTTTACACTGTTCCCGCACGTTCGTGCACCGGCGCTCGGTGTGGGCGCACCAGCAGCGCGTGCACGCCGCCGCGCCGCGCGCGCCCGCACCGCGACCCAACAAGACCTACGTCGTGTGCGAGATCTGCGGACTCAAGTGCATCTCTAAAGCGTCGTTGGTCCACCATCAGAGGATACATTCTGGCGAGAAGCCGTTCCAGTGTCCCGAGTGTCCCAAGAAGTTCAGCGTGTGCCAAAGCCTGCAGATCCACCTGCGCACCCACACCGGGGAGCGTCCGTTCAAGTGCCGCAACTGCCCCAAAGCGTTCAAGCACAAAGCGGCACTTAACAGGCATGACAGGGTGCACACCGGGGCGAAGCCCTACACGTGTCTCCACTGCGGCAAGTCGTTCTCGCAGTCCAACTCGATGAAGCTACACGTCCGCACCGTCCACCTCAAAATGCCGGCGCCCTACAGAGATAGAAGGAAAATCAAAGACAGTGTACCAAATACAGATTAA
- Protein Sequence
- MEEILMCRVCLATDVRMYNMHTYDLVRAYENITGFKMTKLRNLPVHMCTFCTAVLLKCVSFKERCGRAVDVLNSMLISSGLVPHSDITNIRRLNKLELPYTSQVEVLLIKEEDEDTDRVEYDVDDGDDKSRMFDDEDINVNCGGDDGVAAYADVCDDSTSIADIKDIDIIENEPEMIKIEKELSPAKENIVKELEFEHIDIELITLSKEEQIQEVQARKFSVNYQNSMYKCDKCFKGFITDATYKNHMYRHDPASGAHSCEACHTRWASARALRSHVVAAHARKFVCRLCAHVTRSANSAREHAHWHNGHTFRCNVCGSTFAKSTSYLTHLRLQHPSKHRCELCGESFLGVNGLKIHKKKSHRNSQSEEFSCEMCKAVFHTQEALSVHESLRQENLGCGSGLKPCAQCGHSYLDEERLQEHMNIHHRKNALKCLHCSRTFVHRRSVWAHQQRVHAAAPRAPAPRPNKTYVVCEICGLKCISKASLVHHQRIHSGEKPFQCPECPKKFSVCQSLQIHLRTHTGERPFKCRNCPKAFKHKAALNRHDRVHTGAKPYTCLHCGKSFSQSNSMKLHVRTVHLKMPAPYRDRRKIKDSVPNTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00291004;
- 90% Identity
- iTF_00291004;
- 80% Identity
- -