Hfuc001237.1
Basic Information
- Insect
- Hemaris fuciformis
- Gene Symbol
- -
- Assembly
- GCA_907164795.1
- Location
- OU015459.1:4580364-4594671[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.56 46 5.3 0.3 1 23 208 230 208 230 0.92 2 11 0.00011 0.0093 16.9 4.1 1 23 237 259 237 259 0.98 3 11 0.075 6.2 8.0 1.8 1 23 263 285 263 285 0.94 4 11 0.00087 0.073 14.1 3.6 1 23 290 313 290 313 0.98 5 11 0.016 1.3 10.2 0.3 2 23 318 340 317 340 0.93 6 11 0.0027 0.23 12.5 0.1 5 21 356 372 353 377 0.90 7 11 0.43 35 5.7 0.4 2 23 419 441 418 441 0.95 8 11 0.00079 0.065 14.3 0.2 2 23 457 478 456 478 0.95 9 11 2.8e-05 0.0023 18.8 1.5 1 23 484 506 484 506 0.98 10 11 1.4e-05 0.0012 19.7 6.8 1 23 513 535 513 535 0.96 11 11 4.2e-05 0.0035 18.3 1.4 1 23 541 564 541 564 0.95
Sequence Information
- Coding Sequence
- ATGGCTGATATGAAGAAAAAATTCAAATCAAATAAGTTTGTAAAAGCTTGCAGAATATGCCTGGCAATGGATAGAAAAATGTTTCACATAAAGAAATACAACTTGTCTGTTTATTATGAAGAAATTACAGGAATAAATATCAGTACCCAAAAAGACGGTTTTCCTCAGAAACTATGCTGGGAATGTGCTCACCGACTGGTAGCTTGCAATAGGTTCAAAAGTAAAGCTTTACGGGGCTATCAACTTATGACCGAATTGTTACAGGCGGCTGAGTTGCTGACATCACAAAATTTAGCATCAATAGACAGAGTTACAAACAAACTGACAACAAACCTATCACAGACAATTATTGATAGCAATAACACAGATATTATAGTAGAAGACACCGCACCAACCATAGACTATATAGAAGATGAACCAGAGATAAAAGATGAGACAGACAGTTCAAGCGATGAGGTCCTATCAAAAAAGAGTTATGTTAAAGTTAAAATAGACCGACGAAAGAAACCTGCTAAAGATGTTTTGAACCAAGACATATTCGCAATAACTGATTTAACTTATGAAGAACAGTTGTATGAGATTAATAAAAGGAGAGATTCGCCTAATTATAAAAATTCAGAGTATAAATGCATGGAATGTTATAAAGGATTTTTGGATGGAGAAGCGTTTAAAGGGCATATAGACAGACATTCTGATCAAAGCGGCACCTACAAATGCGATATATGTAAAATAAGATTCAAAAAGCAACACGCATTAAGGAACCACACGACCTCACATATGCAGAAGTTTAGCTGCAAACAGTGTCCATATGTCACGACAAGACGACACGCAGCTAAACTCCACGAAGAGTACCATAATGGAACGAGATATCAATGTCCACATTGTCAAGAACATTTCGTTAAGATATCAACATATATGAGCCATGTGCGGATAAAACACCCGTCAGACATAGTATGCGGCTTGTGTGGCCATTCCTTCGTCAGCGCTAAAGGATTAGGACTACACAAGAAGCTGAAACATAGATTTGACGATAGATTAATACCAGAAGACGCCCCATCTTGTATAGAATGCGGTGTTAGTTTCATAACTAAAGATGCTTTGGAGAACCATTTGAGATTATCAGCAAGACATAACAATAGTGAGAACCAGCGCAAAAGAGTGCACAAAAGTAAAGATATACACGCCAGAAGTAGAGAGATGAACATAGAAGATACGAAGAAGAGAAGGAATTCCTGCAAGCCGGAAGGACCTATATCTTGTGAACAGTGTGACCTTCAACTGCCGGATTCCTTGTCCTACTACAGGCACTTTAGAAGGTCGCATCCGGATAAGAATCGAACCAACTACCCATCAATGAAGAGCAAGAGCATGTGTGAAGTTTGCGGGAAGATGTTTCAAAGTCTAGCCCTGCTCCAAGACCACAGCTTCACCCACCAGGACTCGAAGCAGTTCACCTGCGCTGTGTGCGACAAGCGGTTTCAGCGCAAATACCGCTTGATAGCGCACAGACGGCTGCATTTAGCACAAAGAGCAACTCACGCATGCCATATCTGTGATAAAAGATTCACAACAGCCAGCAATATGCATCGTCATATGTTTAGTCACACAGGCCTGAAACCCTTTAAATGCGAAATGTGTGGTAAAGGGTTCAAACACGCGAGCGAAAAACGGGTTCACATAACATATGTCCATCTGAAGAAACCTTGGCCTAAGAGGACTAAAGGGAAGAGAAGGAGTGATAGTAGACAGGGCCAAATCCCACAATCAGCGCCGCAGAATGTGCACGATTTGGACTTAGTCCAGCCTTTATGGCCTGCTTGCAATGATCCAAAAATACCAGACGGTATTGTTGAGGACAAACCGATGTACTATAATTTAAAAATATAG
- Protein Sequence
- MADMKKKFKSNKFVKACRICLAMDRKMFHIKKYNLSVYYEEITGINISTQKDGFPQKLCWECAHRLVACNRFKSKALRGYQLMTELLQAAELLTSQNLASIDRVTNKLTTNLSQTIIDSNNTDIIVEDTAPTIDYIEDEPEIKDETDSSSDEVLSKKSYVKVKIDRRKKPAKDVLNQDIFAITDLTYEEQLYEINKRRDSPNYKNSEYKCMECYKGFLDGEAFKGHIDRHSDQSGTYKCDICKIRFKKQHALRNHTTSHMQKFSCKQCPYVTTRRHAAKLHEEYHNGTRYQCPHCQEHFVKISTYMSHVRIKHPSDIVCGLCGHSFVSAKGLGLHKKLKHRFDDRLIPEDAPSCIECGVSFITKDALENHLRLSARHNNSENQRKRVHKSKDIHARSREMNIEDTKKRRNSCKPEGPISCEQCDLQLPDSLSYYRHFRRSHPDKNRTNYPSMKSKSMCEVCGKMFQSLALLQDHSFTHQDSKQFTCAVCDKRFQRKYRLIAHRRLHLAQRATHACHICDKRFTTASNMHRHMFSHTGLKPFKCEMCGKGFKHASEKRVHITYVHLKKPWPKRTKGKRRSDSRQGQIPQSAPQNVHDLDLVQPLWPACNDPKIPDGIVEDKPMYYNLKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00290995;
- 90% Identity
- iTF_00290995;
- 80% Identity
- -