Hfuc001151.1
Basic Information
- Insect
- Hemaris fuciformis
- Gene Symbol
- -
- Assembly
- GCA_907164795.1
- Location
- OU015459.1:3410302-3418519[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.029 2.4 9.3 1.5 1 23 223 246 223 246 0.95 2 11 1.2 1e+02 4.2 0.3 3 23 255 274 253 274 0.80 3 11 0.042 3.5 8.8 1.8 1 23 278 300 278 300 0.98 4 11 7e-05 0.0058 17.6 2.8 1 23 340 363 340 363 0.98 5 11 3.3e-06 0.00027 21.7 0.7 1 23 367 389 367 389 0.97 6 11 0.01 0.85 10.7 1.1 2 23 397 417 397 417 0.97 7 11 0.0088 0.73 11.0 0.1 2 21 424 443 423 448 0.93 8 11 1.2e-05 0.00098 20.0 0.8 1 23 456 479 456 479 0.96 9 11 0.00053 0.044 14.8 3.9 1 23 485 508 485 509 0.97 10 11 8e-05 0.0066 17.4 0.4 3 23 520 540 519 540 0.94 11 11 4e-05 0.0033 18.3 2.0 2 23 547 569 546 569 0.96
Sequence Information
- Coding Sequence
- ATGGAGGATTGCTCAGAAGCTGTGTTAAAAAAGCTTTGTTGTACGTGTTTGAGCGTTAATCGCAAGTTGTTTTTACTTTGCCGGGTGGACGATGGTGTCAACAATTTGTATTTGTTGTTGTCTTCGGATACGGAAGCTTACAGAGAAGGGTTCTACAAAGACACGGCGACTTTGTTCATATGCTGGGAGTGTAAAGCCATCATGAGACGGATAAGCCAGTTCAGGAGGCAGGCTTGTGTCACTCAGAAGAAGCTTACAGCTATTGCGGAGGGGCGTACTGATGCTAAACCTCAAATGCAGTGCTTATCTAGGCTCCACACACAGCACATAACAACATACCAAATTATCACATCAGAGAGTGAGTCAAAAGAGGACAACTTCATCGATTGTGGTCCAGCAAATGCTCTCAAAGATGAGCTTGACATAGATGACATACCGCTATCTGAGTTGCAGAGTTATGAGTCTGGCAGAGAAGATGAGGTTTTAGAAGCACCCCCAAACGGCTTGAAAGACCACGCGAAAGACGTAAAAGAAAAAAAGATAAAAACAAGAAAGGTGAAAAAGAAAATGTCAGATAAATACTTCAAAATATCAAAGATTAATGAAGAACAAATGAAAGACTTACGGAGGATAAGATCTCAAAATCCTTTGTATATGAATGCTGGACATAAATGCGAAAGTTGTGTCGAAATGTTTTCTGATGAGAAGGATTTTGAGATGCATAAGAACAACCTACATGTAGAGAAACTTGACCACTCCCAATGTGATATATGCAAAGTATATATCCCCTCCACATCACTACAAGATCACAAAAACACCCACTATAAGAAATACACTTGTCACTTCTGCGATTTCACTTCGCAGAATGTGGGTGAAGTGATGAGACACGTGAGAAATCACTCTTTGAAGATCGGCGCTGTTCTGTGTAAGGGTCAAAAGAAAACTGTTAAGGTTAAGAACCCAGGGTCCAAACCGCGTAGGAACAGAATAATGACTGACAAGAGGACTCCGTTTGGCTTCAAGTGTCCCGAGTGCGACAAGTACTTTGACAATAAAAATCTAAGATACAAGCACATTAGGAGGTACCATAGCGAAGGATTTTCCTGTAGCGTGTGTGGAAAACGTTATCCCTTTAAAGATAACCTAATTAAGCATGAGAGGCTTCACCAAGGCCCCCTCCCCCGCGAGGAGTGCCCCACATGCCACAAGATGATCAGATCTGACCTACTGAAGACCCACGCCAGGATCCATTCAGCGAGACAGACCATAAAATGCGTGGAATGTGACAGGATATACATAAGTCGAGCTTCATACGAGAACCATTTGAAGTACAGCCAGGCGCATGCGTCGCAGGACGTTCTGAAGTACAAATGCTCGATGTGTGACAAAGGCTACAGGTCCAAAGGGGAGTTGAGAGACCACGTCAACTACCAGCATTTGGGCAAGACCCAACATAAGTGCCCTATCTGTGGGAAAGCTCTCGCGACTCGGCGCTGTATAACTCGACACGTGCGGCGCGCCCACCACGACATCAAGGAGAGCCCGAGGGATAAGATATGTCAGCAATGCGGGAAGGCGTTTAGGGACAAAAAAGGCCTACGAGAGCACGAGTTTATACATACTGGCGAGCGCCCTCTGTCGTGCGAAATCTGCGGCTGCACATTCAGGCAAAGCGCGTCCCTATACACCCATAGGAAGAGGGTGCACAAGATATACCCGCAGAAGAAAAACGTGGAGCTTGTTGAAGTGGAATGA
- Protein Sequence
- MEDCSEAVLKKLCCTCLSVNRKLFLLCRVDDGVNNLYLLLSSDTEAYREGFYKDTATLFICWECKAIMRRISQFRRQACVTQKKLTAIAEGRTDAKPQMQCLSRLHTQHITTYQIITSESESKEDNFIDCGPANALKDELDIDDIPLSELQSYESGREDEVLEAPPNGLKDHAKDVKEKKIKTRKVKKKMSDKYFKISKINEEQMKDLRRIRSQNPLYMNAGHKCESCVEMFSDEKDFEMHKNNLHVEKLDHSQCDICKVYIPSTSLQDHKNTHYKKYTCHFCDFTSQNVGEVMRHVRNHSLKIGAVLCKGQKKTVKVKNPGSKPRRNRIMTDKRTPFGFKCPECDKYFDNKNLRYKHIRRYHSEGFSCSVCGKRYPFKDNLIKHERLHQGPLPREECPTCHKMIRSDLLKTHARIHSARQTIKCVECDRIYISRASYENHLKYSQAHASQDVLKYKCSMCDKGYRSKGELRDHVNYQHLGKTQHKCPICGKALATRRCITRHVRRAHHDIKESPRDKICQQCGKAFRDKKGLREHEFIHTGERPLSCEICGCTFRQSASLYTHRKRVHKIYPQKKNVELVEVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00290998;
- 90% Identity
- -
- 80% Identity
- -