Basic Information

Insect: Hemaris fuciformis
Gene Symbol: -
Assembly: GCA_907164795.1
Location: OU015448.1:5799496-5814826[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.6 50 5.2 1.0 2 20 7 26 6 28 0.87

2 12 7 5.8e+02 1.8 0.1 3 20 35 52 34 54 0.91

3 12 0.33 28 6.0 0.2 1 12 205 216 205 225 0.88

4 12 3.8e-05 0.0032 18.4 0.2 1 23 378 400 378 400 0.98

5 12 7.5e-05 0.0062 17.5 1.1 1 23 413 435 413 435 0.99

6 12 2.9e-05 0.0024 18.8 0.5 1 21 487 507 487 508 0.95

7 12 0.00045 0.037 15.0 2.9 1 23 519 541 519 541 0.99

8 12 1.3e-06 0.0001 23.1 4.5 1 23 547 569 547 569 0.98

9 12 0.00046 0.038 15.0 5.2 1 23 575 597 575 597 0.97

10 12 0.00032 0.027 15.5 2.9 1 20 603 622 603 625 0.93

11 12 4.7e-05 0.0039 18.1 0.9 1 23 629 651 629 651 0.98

12 12 0.00026 0.022 15.8 0.1 1 23 659 682 659 682 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.6	50	5.2	1.0	2	20	7	26	6	28	0.87
2	12	7	5.8e+02	1.8	0.1	3	20	35	52	34	54	0.91
3	12	0.33	28	6.0	0.2	1	12	205	216	205	225	0.88
4	12	3.8e-05	0.0032	18.4	0.2	1	23	378	400	378	400	0.98
5	12	7.5e-05	0.0062	17.5	1.1	1	23	413	435	413	435	0.99
6	12	2.9e-05	0.0024	18.8	0.5	1	21	487	507	487	508	0.95
7	12	0.00045	0.037	15.0	2.9	1	23	519	541	519	541	0.99
8	12	1.3e-06	0.0001	23.1	4.5	1	23	547	569	547	569	0.98
9	12	0.00046	0.038	15.0	5.2	1	23	575	597	575	597	0.97
10	12	0.00032	0.027	15.5	2.9	1	20	603	622	603	625	0.93
11	12	4.7e-05	0.0039	18.1	0.9	1	23	629	651	629	651	0.98
12	12	0.00026	0.022	15.8	0.1	1	23	659	682	659	682	0.96

Sequence Information

Coding Sequence: ATGGAAGACTTAAAGTTAAAATGCCCACTTTGTTGCGATATTTTTTTTAATTCCAAACAGCAGCTGTTAGATCACCTTACAAAACGTTTAGATAATTTATTATGCCCTATTTGCACCAATAAATGGTCAACAGTAGATCATCTGATTGAACATTTGACCCTTGATAATTGCCAAAATAATAGCTTATCTAATAGTTTAAGCTTAGACGATGATGCCCAAGTACTTAACATAGGCACTACAGCAGAAAACACTGTTAATGAAATTATGACTGATAGTTCAAATTCAATCTCAGAAAATAGTTTTCCTGGAGTCCAAGGCTTAGACTCTGTAGTTGAGAATGGTGAAGTTGGTAAAATGTATGTTGAGTTACTCGGCAAACAGTTACTAAAGCCGTGTTTGCAGACACAAGAGCTAAAGCTTGTGAAGCATGATGGAGGGACTCACTATGTTATAATCACTCAACCTACTGCACAGCTTAGTGTTGATACTATAGTAGCCAGACAGAATAATGATGGCACTATATCAATGACTACTGTGGAAGATATGCAAATGAGTTCAGACACATTAATAGCTCCAACAGAAAATGAGCCAGAAGACAACCAAGAGGAGCTATACAGTTGTAATACTTGTGGGGTGTCGTTCGCATCAGTCTTGGACCACATACAGAACTATCATAATGACCAAGATGTTGTTGTTGAGGAGCCTGTGGAAGAGCCAGAAAATAATGTGCAGTTTGTGGCTCCCGAGGATACAGCAGCTGGTGACAAACTTGCGTCAAGGAGGATGATTACTGAAACTGGTGACATTGTAGTAGCACCTTCACTGCCTAAGGATGAACCACTTAGTGGTGAACCACCTCCAGAGCTAATGGCCACTTCGAATGATGCAGCAGGACAATCTACACGTGTGTACGCCACACGCTACGTGAAAATTGATAACTTGTGTGACAGTGTTGTGAGGGACATCAAGGATTCTGAAAATAAAAATGAAAATGGTCCGTACCACAAAGTTGTCGTGAAAGAATTGAAGACACAAACGGGCACTATCTTTAAAATGTATCATTGCAAATCGTGCCAGGTTTACAAAAGCGATTTGAAAGACTTCAAAACCGACCCTTGTAAACCATTGAAATACGCTTGCCCGCATTGTCCTGTAACGTATGGAAATGCCAAGTCACTGTACGCACATATGAAAGTTCACATAGAAAAAAGGGTGGATCCCGACGCGCCCGTGACATACGAGTGTGCAGTTTGCTCCACCAAGTTCCCAACTAACAAATCGTTAAAATTGCATAAAAGAATGCACGATCCCATGAAAGTTCGACCGATAGAACTACCAGTTGAGAACAAAGACGGTTCAATGGTGTCCAGTAGTAAATACTTGTGTCAGATATGTGATAAACTAATACCCATGGACTATAGGACGGTGCATCAGAACTCGCACAAGTCTGCCAACATGTACAACTGCAGTATATGCAACAAGAAATTCACGTCCAATGAATATTTAGATATGCATATGAAAGTTACAGTTAGTAAGCAAGATAAATTGTTGCCGTACAAATGTTTGTATTGCAATAGAAAATTTGCCAGACCGCATGAGAAAGTGAAACATGAAAGGATACACACAGGAGAGAAGCCTCACTCGTGCGAGATCTGCGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCCCGGCCCTACGCCTGTCCGCACTGCGGGAAACGGTTCAAGGCCCACAGCGTGTACAATCACCATTTATTAACACATTCGGAAGTGCGTGCGTACAAGTGTCCGTTTTGTCCTAAAACATTCAAGACTTCAGTGCAGCTGGCAGGACATAAGAACTGTCATACAAAACCTTTCTCATGTCAACACTGTAACAGGCCGTTCGCGTCGCTGTACGCGGTGCGCGTGCACATGGAGACGCACCTGCGGCAGAACAACCTGAAGTTCTCGTGCTCGCTGTGCGGCGCGAGCTACGCGCGGGCCTTCGCGCTCAAGGACCACGTGCGCCAGGCGCACGACCGGGACGTCGACGCCAAGGAGAACGAACTGGTCGCCACAACCACACCATCTACACTACTCAAGACGAGGAATGGACGCAAAGAGAAACGGAAAACGTACAAACTCTAA
Protein Sequence: MEDLKLKCPLCCDIFFNSKQQLLDHLTKRLDNLLCPICTNKWSTVDHLIEHLTLDNCQNNSLSNSLSLDDDAQVLNIGTTAENTVNEIMTDSSNSISENSFPGVQGLDSVVENGEVGKMYVELLGKQLLKPCLQTQELKLVKHDGGTHYVIITQPTAQLSVDTIVARQNNDGTISMTTVEDMQMSSDTLIAPTENEPEDNQEELYSCNTCGVSFASVLDHIQNYHNDQDVVVEEPVEEPENNVQFVAPEDTAAGDKLASRRMITETGDIVVAPSLPKDEPLSGEPPPELMATSNDAAGQSTRVYATRYVKIDNLCDSVVRDIKDSENKNENGPYHKVVVKELKTQTGTIFKMYHCKSCQVYKSDLKDFKTDPCKPLKYACPHCPVTYGNAKSLYAHMKVHIEKRVDPDAPVTYECAVCSTKFPTNKSLKLHKRMHDPMKVRPIELPVENKDGSMVSSSKYLCQICDKLIPMDYRTVHQNSHKSANMYNCSICNKKFTSNEYLDMHMKVTVSKQDKLLPYKCLYCNRKFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYACPHCGKRFKAHSVYNHHLLTHSEVRAYKCPFCPKTFKTSVQLAGHKNCHTKPFSCQHCNRPFASLYAVRVHMETHLRQNNLKFSCSLCGASYARAFALKDHVRQAHDRDVDAKENELVATTTPSTLLKTRNGRKEKRKTYKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00290955;
90% Identity: -
80% Identity: -