Hfuc001264.1
Basic Information
- Insect
- Hemaris fuciformis
- Gene Symbol
- -
- Assembly
- GCA_907164795.1
- Location
- OU015459.1:5041910-5062882[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 2.2e-05 0.0018 19.1 2.7 1 23 279 301 279 301 0.99 2 11 0.15 13 7.1 0.9 1 23 308 330 308 330 0.96 3 11 0.015 1.3 10.2 0.9 1 23 334 357 334 357 0.97 4 11 0.13 11 7.3 4.4 1 23 364 386 364 387 0.94 5 11 2.4e-06 0.0002 22.2 0.2 2 23 393 414 393 414 0.98 6 11 5.6e-05 0.0047 17.9 1.6 1 23 420 442 420 442 0.98 7 11 0.00049 0.041 14.9 1.7 1 22 448 469 448 473 0.93 8 11 0.0034 0.28 12.3 3.3 3 23 483 504 483 504 0.98 9 11 0.04 3.3 8.9 0.0 1 23 510 533 510 533 0.94 10 11 1.2e-05 0.001 19.9 0.6 1 23 542 564 542 564 0.98 11 11 0.00018 0.015 16.2 0.8 1 23 570 593 570 593 0.97
Sequence Information
- Coding Sequence
- ATGGATACGACAAGTTTAGACAACGTTGAAGACTTTAAACTAGATTTCGAAGTTGAAAAACCCTTGTGCAGGTGTTGTTTGACCACAGAAAGAAAAATGGCGAATGCTGCGTTATACGAAGCTTATATTCGAGATTTAGCCGGTACAGATATGTCCAACTCGGACGGACTACCGTCATATTTATGCTGGGAGTGCACAGCGTTACTTAAGAAGGCTGTCAAGTTTAAATACAAGATGTTGAGGGCTCATACACTTCTCTACGAATATGCCACGAGATGCGCACCATTCCCTATAGACGCCCAAGATCCTGAGCTGACGAAATACGCAAGTCCACATTTATTGACCACAAAGACACTCACTTTTGAAACGAACGGGAAAGGCAAAATTGGATTTCAGAAAGTCTTAGAACACGAGAAAGAAACACAGTCAGGCGACTTAGAAGTGGAGCTGCCCGTGTTGATAAACAAATTTGAAGAAGATTTCGTGAAAGAGGAGACCACCTTCAATGATTATGATGACGGAATCACTCTTGAGGAGTTCAGGACAAATAAGATAACAGAAGAGGATTTGAACAATTTCCTACAAGACGACGAACTTGTAGTGCCCAAAGAGGAGCCGGACGTCAAGAAGAAGACGAAAAAGAAGAAGAAAGAGGATAAAGTCAAGAAGAAAAAGCAGAGCGACACAACAGAAACAGAAGCGAAAAGCGAAAAGAAATCGTCAATAAGAAGAACTATTGAATTGGACCCAAATAAGATAAAAATAGTGATTTTAAACCCAGAGGAACAGATCAAACAGAGAGAGGAGGAGAGCAAGACCAATCTTAAGTTTCCATATCAATGCAATTTGTGCTTTAAAGGGTTCAATTTTGAGTCCAAATTGCAGAATCACATGAACAAACACAGCCCGTCCCGCGGCCCGTTCGAGTGCCAGTTGTGCCACATGTTCCTGCCGACCGCGTACAGCTTCAGCGTGCACTCGCTCATACACACGCGACGCTTCGAGTGCGTCAAGTGCGGACGCAGGATGACGGACAGATCGTCCATCCTCGACCATTTTCGGACGCAACACGAAGGCGTGATGACTCTCTACACATGTCAGATCTGTGGGAAAATGTCCAATAACAGCAAGACTCACAGAGGCCATGTCCGTAACCACCATTCAGGCGATAGACCCAAGTGCGACCAGTGCGGGAAGACTTTCGTCAACGCAGATTCTCTGGTGGAGCATCAACAGATTCACCAAGGCATAAAGAACTACGAGTGCGAATTGTGCGGCGCCAGGTTCCGAACCCGCGCTCAGATCAAGCACCACCAACTGAAACATTCCGCTGCCAAGGATTACTACTGCGTGGAATGCGATGCTCGGTTCAAATCTTCGCATGGCCTACGACAGCATTTGCAAAGGAGTTTGAAACACAAAGATGTTCAGAGCTTAAAGTGGGGCTGCCCGCGCTGCCACAAGCGGTTCGAGTCGGAGCGGCTGCTGTGTGCGCACGCGCGCGTGCAGCACGAGGGCGCGCGCCCGCACGCCTGCGCCTCGTGCGGCGCCGCGCTCGCCAGCCGCGCCTCGCTCGCCAAGCACCTCGCCACCGTGCACGCCGGCCGCCGCCCGCCGCCCCGCCACGTCTGCGACACCTGCGGGAAGGCGTTCCGGGGTCGCTCCGTGCTCGTGAACCACGTGCGCACGCACACCGGCGAGAAGCCGTTCGAGTGCGAACTGTGCTCGCGCAAGTTCACGCAACGCACCGCCATGCGCACCCACGTCAAGATCGTGCACCTGAAGCAGCGGCGCGGCGCCAAGCCCGGCCCGCGCGCGCGCCCCGCCCCGCCCGCCCCCCCCGCGCACGACGCGCCCTTCGACGCCTGGCCCGCGCCCTTCTACCCGCTGGGCGCCGGCCCCGCGTGA
- Protein Sequence
- MDTTSLDNVEDFKLDFEVEKPLCRCCLTTERKMANAALYEAYIRDLAGTDMSNSDGLPSYLCWECTALLKKAVKFKYKMLRAHTLLYEYATRCAPFPIDAQDPELTKYASPHLLTTKTLTFETNGKGKIGFQKVLEHEKETQSGDLEVELPVLINKFEEDFVKEETTFNDYDDGITLEEFRTNKITEEDLNNFLQDDELVVPKEEPDVKKKTKKKKKEDKVKKKKQSDTTETEAKSEKKSSIRRTIELDPNKIKIVILNPEEQIKQREEESKTNLKFPYQCNLCFKGFNFESKLQNHMNKHSPSRGPFECQLCHMFLPTAYSFSVHSLIHTRRFECVKCGRRMTDRSSILDHFRTQHEGVMTLYTCQICGKMSNNSKTHRGHVRNHHSGDRPKCDQCGKTFVNADSLVEHQQIHQGIKNYECELCGARFRTRAQIKHHQLKHSAAKDYYCVECDARFKSSHGLRQHLQRSLKHKDVQSLKWGCPRCHKRFESERLLCAHARVQHEGARPHACASCGAALASRASLAKHLATVHAGRRPPPRHVCDTCGKAFRGRSVLVNHVRTHTGEKPFECELCSRKFTQRTAMRTHVKIVHLKQRRGAKPGPRARPAPPAPPAHDAPFDAWPAPFYPLGAGPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00290950;
- 90% Identity
- -
- 80% Identity
- -