Hfuc021678.1
Basic Information
- Insect
- Hemaris fuciformis
- Gene Symbol
- -
- Assembly
- GCA_907164795.1
- Location
- OU015458.1:566131-576875[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.3e-05 0.0011 19.8 4.1 1 23 627 649 627 649 0.97 2 12 0.0066 0.55 11.4 2.5 1 23 655 677 655 677 0.97 3 12 0.00029 0.024 15.6 3.2 1 19 683 701 683 704 0.94 4 12 0.00018 0.015 16.3 0.7 1 23 711 733 711 733 0.98 5 12 0.0029 0.24 12.5 0.7 1 22 739 760 739 763 0.90 6 12 0.013 1.1 10.4 3.6 2 23 824 845 823 845 0.94 7 12 0.00053 0.044 14.8 0.7 1 23 850 872 850 872 0.98 8 12 5.7e-05 0.0048 17.8 1.5 1 23 877 899 877 899 0.97 9 12 4.1e-05 0.0034 18.3 0.1 1 23 904 926 904 926 0.97 10 12 0.0005 0.041 14.9 4.4 1 23 932 954 932 954 0.93 11 12 0.78 65 4.8 2.3 3 23 962 982 960 982 0.89 12 12 0.012 0.97 10.6 0.7 1 21 988 1008 988 1009 0.96
Sequence Information
- Coding Sequence
- ATGCAGATCAATCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAAAATCACTTATCAACGACCAACAGAGGCTGCAGCTAAATCTAGAAAAGTGGAGGTTCACGTAGAATATGAAGAACAACAGGCGAGGCTTCAAGATGAATTGGAATTGCGGGCAGGAATATACGGTAGAGCTAGATTGGACGTAGAAATAGACACTGATGAAGACATATCAATTGCCAACGATATAGACGACGCTGAACAACTAGAGATAATAGAATACCCCCAATCCACGAATGAAATTGATTGTATCATTGAGGAGAATGTGCTGAATCTCATAGATGAAGATTGGATGTCTTTAACAGGAAATGTATTTTGTAGTATGGATGAAATTGAACATTGGAGGCGTTTGAGGGTGAATTCAAACGCTGATGAGAAGTTTTTCAACAACAACAACATACGTGATGCGGAATATGATGAAATGAATTTCAAAGGAGATGATTACGGAAAAGCGGGACAAAAAAATATACAAAAAGAGACCGCAAAATTAGACCGAAAAAAAGAAAAAAGAAAAAAACGGAAAAGGAATAAGAGTTTGGAGGAAAAAACAGTACACGCACAAAAGAAAGAACAAACCAGTAATGAAAGTACAGGAGATACAACCGTTGCTCTTAACATAAAAGCTGAAGAAGACAACTTAGAATTAAAAGGAAGGCGTGCTTCTGGAGCTTTACAAGACAAAGAAGTAAATCGACAACCCGTTAACCAAAATAAGCTTCCGGAACACAGTTCAAGCAACAAAGATGAAACAGCTTCTACTCAATCAAAAACAAAGAAGATAAATAAAAAGCACCGTCATACAAAGGATAAAACCAAAAAGAATGTAGAAACTGATGAAAAAATTGTTAACGATTCAGTCTCGACACCAGTTGTGGAAGTAACTACAGTAGAAGTGGTCCAACCAGAAATAAAATCAGATGAACACGATACAAAAGCTCGGGAAGGATCAAAATTGCAAAATCGCAGAGGACTTGAAAGATATTTACATCTGGAAGACGTTGGCAGTAAAGATGTAAAAGCACGTGCTCCAAAAAAATCGCGGAGAGACGAAAAAAAATTGAAAGATCAAAACAACACAGCTAGGGTTGTAACTATAATGACATCCAAAAAAGAAATGAAGAAAGGACAACCTGTTGGTACATCTGATGTATTTGAAACAGGCAACCAGCAGCAACATCGAGAAAAACCTCCTAAAAAGGAACGCGAAGAACGCTCTGATTCTAAAAATGAAACTAATACAAAACAAATACATAAAGATCGTTCTGATTCCAAATATGTTCCTGAGGAAATTTCTCAATCTAAACATCAATCCAATTCTAAAAAGAAAAAACGTAGGCATTCCAAATCAAAGAGCAGATCTAGAATAGATAATAAGGAACCTTCCAATTCGGGAGATAAATCTGACGCAAATGAACGCGGGAAACATTCCGACTCGAAACACAAGCGTCATAAAAAAAGTAGAGACAAACATTCTGAATCAAAGTCTAAAAACCACCCAAAACAACGAGAAGAATTCAAAACGCAAAATGATTTGGAATCGAAATCGGATAAATTGAAAGAAGTTCAAGATAAGCTGGCTTCCAAGAGCAAAAAAAGAAAGCATAAATTGGACACTAAATCTCAATCAAAAAATGAAGCACATTCAAAAATCAAAGCAGCATTTGAACATACAACATATTCTTCTTCTCAGATTGTGTCAGAGGATGGACGTACTAAAATCAAAATAAAAAGGCATTTAAATTCACAACCAAAAGATTATATATGTAAAAACTGCCATGAATCCTTTTCCACCCAGAGCCTATTGACAAAGCACAGCAAATCGCACATTAAAAAAAAGCGGTTTGCGTGCACTTACTGCAGTAAAAAATACTTACGAAAATCATATTGGATACGCCACGAGAAAACGCACCGAGGCGTTAAGGACTATGAGTGTCAAATATGCGATAAAAAATTCAGCAACCGTACGGCCTATACGCGACACAACTGTAAGAAAGCTACATTAAAGAAATACCGCTGCCCATTTTGTCCTAAAGTTTTTACGGCCAGAGAGACGTTCGTTAATCATTATAATCTGCACACTGGCAAAGATCCCTTCAAATGTATAGACTGTAGCAAAATTTTCGTATCAAACGAACAACTCTTGGCTCACATTTGCGTTGAAAAACATAAAATTGTTCGTAACATAATTGATGCTGATAGGTTAACATCTAACTCTTACACCACTGAGCCACCAAAAGCTGCTAATTTTAAAAACGATGATATACAAGTAAATCCTTCGAAACGTAAGATAATAGCTTCAATTGGGAATTCAGATGGTGAACACAGCGCTTCAAAAAAAAGAGGACTTCACTGCGATAAATGCAATGAAAAATTCAACGATGTAAATAAATTCAAAAGGCACATGACTGACCACAACAAACCTATGTTCACTTGCGATGTTTGCGAACGATCGTTCAATCAAAAAGCTATTATGGTAAAACACATGAAATCACATTCGGGAAACGATTTTATCTGCGACATCTGCAATAAGAAATTCTCAACTCGGCAAGTGTACAGGATCCATATGCTGAAACACCCTGGGCGGAACTATGCTTGTGAATATTGCGGAAAGATTTTTGAAACCAATCCCGCTTTGTTGATCCACAGTAGGTCCCATATTGGGAATTCTCCGCACCACTGCAATATATGCACCAAAACCTTTAATGACCTCTCGAGTCTCCTGAGGCATAAGACTGCGCACGCCTCTGAAAAACTGTTCGCTTGCTTGTGCTGCCCCAGGCGAGGCATGACCAAGTCCCAATACCAGTCCCATTTACAAACTCATACTGGAGAAACTCCGTATGTTTGTGACAAATGCAGCGACGGTTTCGCAACTAAGACAAAAATGAAAAAGCATATGAAGTCTTGCAAAGGTAAATAA
- Protein Sequence
- MQINPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKITYQRPTEAAAKSRKVEVHVEYEEQQARLQDELELRAGIYGRARLDVEIDTDEDISIANDIDDAEQLEIIEYPQSTNEIDCIIEENVLNLIDEDWMSLTGNVFCSMDEIEHWRRLRVNSNADEKFFNNNNIRDAEYDEMNFKGDDYGKAGQKNIQKETAKLDRKKEKRKKRKRNKSLEEKTVHAQKKEQTSNESTGDTTVALNIKAEEDNLELKGRRASGALQDKEVNRQPVNQNKLPEHSSSNKDETASTQSKTKKINKKHRHTKDKTKKNVETDEKIVNDSVSTPVVEVTTVEVVQPEIKSDEHDTKAREGSKLQNRRGLERYLHLEDVGSKDVKARAPKKSRRDEKKLKDQNNTARVVTIMTSKKEMKKGQPVGTSDVFETGNQQQHREKPPKKEREERSDSKNETNTKQIHKDRSDSKYVPEEISQSKHQSNSKKKKRRHSKSKSRSRIDNKEPSNSGDKSDANERGKHSDSKHKRHKKSRDKHSESKSKNHPKQREEFKTQNDLESKSDKLKEVQDKLASKSKKRKHKLDTKSQSKNEAHSKIKAAFEHTTYSSSQIVSEDGRTKIKIKRHLNSQPKDYICKNCHESFSTQSLLTKHSKSHIKKKRFACTYCSKKYLRKSYWIRHEKTHRGVKDYECQICDKKFSNRTAYTRHNCKKATLKKYRCPFCPKVFTARETFVNHYNLHTGKDPFKCIDCSKIFVSNEQLLAHICVEKHKIVRNIIDADRLTSNSYTTEPPKAANFKNDDIQVNPSKRKIIASIGNSDGEHSASKKRGLHCDKCNEKFNDVNKFKRHMTDHNKPMFTCDVCERSFNQKAIMVKHMKSHSGNDFICDICNKKFSTRQVYRIHMLKHPGRNYACEYCGKIFETNPALLIHSRSHIGNSPHHCNICTKTFNDLSSLLRHKTAHASEKLFACLCCPRRGMTKSQYQSHLQTHTGETPYVCDKCSDGFATKTKMKKHMKSCKGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -