Basic Information

Insect: Hemaris fuciformis
Gene Symbol: -
Assembly: GCA_907164795.1
Location: OU015441.1:5768099-5771352[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.11 9.2 7.5 0.4 5 21 211 227 208 228 0.93

2 12 0.0096 0.8 10.8 2.9 2 23 254 275 253 275 0.95

3 12 0.0046 0.39 11.8 8.4 1 23 285 307 285 307 0.99

4 12 5.2e-06 0.00043 21.1 2.1 1 23 315 338 315 338 0.97

5 12 0.0013 0.11 13.6 2.1 1 23 343 365 343 365 0.98

6 12 0.00022 0.018 16.0 6.4 1 23 371 393 371 393 0.98

7 12 7.9e-08 6.6e-06 26.8 0.8 1 23 399 421 399 421 0.96

8 12 1.5e-06 0.00012 22.8 0.7 1 23 427 449 427 449 0.99

9 12 9e-07 7.5e-05 23.5 0.3 1 23 455 477 455 477 0.98

10 12 2.8e-05 0.0023 18.8 0.5 1 23 483 505 483 505 0.98

11 12 3.7e-05 0.0031 18.4 2.2 1 21 511 531 511 533 0.96

12 12 2.3e-06 0.00019 22.2 0.1 1 23 539 561 539 561 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.11	9.2	7.5	0.4	5	21	211	227	208	228	0.93
2	12	0.0096	0.8	10.8	2.9	2	23	254	275	253	275	0.95
3	12	0.0046	0.39	11.8	8.4	1	23	285	307	285	307	0.99
4	12	5.2e-06	0.00043	21.1	2.1	1	23	315	338	315	338	0.97
5	12	0.0013	0.11	13.6	2.1	1	23	343	365	343	365	0.98
6	12	0.00022	0.018	16.0	6.4	1	23	371	393	371	393	0.98
7	12	7.9e-08	6.6e-06	26.8	0.8	1	23	399	421	399	421	0.96
8	12	1.5e-06	0.00012	22.8	0.7	1	23	427	449	427	449	0.99
9	12	9e-07	7.5e-05	23.5	0.3	1	23	455	477	455	477	0.98
10	12	2.8e-05	0.0023	18.8	0.5	1	23	483	505	483	505	0.98
11	12	3.7e-05	0.0031	18.4	2.2	1	21	511	531	511	533	0.96
12	12	2.3e-06	0.00019	22.2	0.1	1	23	539	561	539	561	0.98

Sequence Information

Coding Sequence: ATGGAAATAACAATAGACGTGTTTGGGAAGATATGTCGTGCTTGTCTCTGTCAGTCTGCGAACATGAAATCATTATTCATGACAATAGATGGTGAAGATCGCAACCTTTTAGATGTTTTTAGAAATATAACTAATGTGAACATTAAAAGTGATGATAAACTGCCTAAACTTGTTTGCAATGAGTGTGAGATAATCATGTGCAATGCTGAAGCCTTCAAGCGTCGCTGTCTTGAGTCTGAGAATATTTTAAGGAGCATATCCGGAGAATCTAACTTAAATTTCGAAAGAGAAGAAAAAGACTTAAAAACTCTTATAAAGGTTGAAAAAAAAGATTGCATACTTAGAAATTTACTGGAAATAACAGGAGAAATCCCTATTGAGACGACTAACGAGGGGGTTGATACAAAAATGCCGATTTTGCAAGATGCTAGTAGTAATATGAACTGTGAAGAAAATTTCGACAAACCTGTGAACTGTAATGACGGGTTAGAAATAGTAAATAATGTCAAAGAAGAACTTAATGTAGAGTCCCAAAGTCATGATGACAATAGTTCCATTGGTGAGCCCTCACCATTAGTAGAAATCGCACCCACAGAATCATTTATTAAACCTGAGAATAAATATTCATGTCACTGTGGACTGAACTTTATTAACAAAGAAAAATACAAAGTGCATTTAAATGTGTTTAACTGTAACAAATTCAATAAACTATTTAAAAAAATTAATAATTCAAATTCTATACAAATAAAAAATCAGATATCATGCCAAAAGTGCAATCGGCAGTTCTGTACAGTGTCTGCATGGAATGCTCATCAACATGCTCATAGAGATGAGACTAAGACTGTCCAGATCTTTCAATGCTCCGTTTGCATGTGTAAATTTAAGCACCGTAAAACTTTAGTAAGGCACATGAGAAAACACAATGAATCTAATGCTGTGAAATATCAATGTGATAAATGTAAGCGAGAATTTAAGTATAAAGCTCATTTGGAGAACCATATAATATCAGTACATTCTCAAAATGGATTTACATGTGACTACTGTATGCAAAGTTTTAATGATAAAAATACTTTGGAGACTCATAGAGATAAACACAAAACGGATAAAAAACATCAGTGTGAAGTTTGTAAAAAGACATTTTATATGCTTTGTACATTAAAAGACCATATGAGGACACATACTGGAGAAAAACCATTCTTATGTTCTGTGTGTGGTAAAGGGTTCAGTCAAAAGACAAATTTGGCACAACATATGAGAAGACATCAAGGATTAAAACCATTTAAATGTGAAAGTTGTGAAAAAAGATTTGTGTCCAAGGGTGAGCTTGAAGCGCACACTCGTACTCATAGTGGCGCACACCCGTTCGTGTGCGACGAGTGTGGCAACGGTTTCACCACCTCCAGCTCACTGGTGAAACATCGCAGGATCCACACAGGAGAACGTCCGTACATCTGCGACCTGTGCCCGATGAGATTCTCTGCCTCGGGAACGTTGAAGAATCATCGAAGAACACATACGGGAGAGCGACCCTTCCAGTGTTCGTATTGCGAAAAGGCTTTCGTTCAGCGCAACGATCTGATCTCTCATATCCGCTGCCACACTGGGGAGCGTCCGTTCGTGTGCAGTCTGTGCGGACAGAGCTTCCGCAAGGCGTCGGGATTGAAGGCGCACGGGCGGGTGCACGCCCCCTCCGCTCACCCCGCGCACCCCCCACACCCGCCACACCTGCTGCAGGAACAATCACAGGACGTACTGCTCAACGTGCACTGCCAACCTACACACTGA
Protein Sequence: MEITIDVFGKICRACLCQSANMKSLFMTIDGEDRNLLDVFRNITNVNIKSDDKLPKLVCNECEIIMCNAEAFKRRCLESENILRSISGESNLNFEREEKDLKTLIKVEKKDCILRNLLEITGEIPIETTNEGVDTKMPILQDASSNMNCEENFDKPVNCNDGLEIVNNVKEELNVESQSHDDNSSIGEPSPLVEIAPTESFIKPENKYSCHCGLNFINKEKYKVHLNVFNCNKFNKLFKKINNSNSIQIKNQISCQKCNRQFCTVSAWNAHQHAHRDETKTVQIFQCSVCMCKFKHRKTLVRHMRKHNESNAVKYQCDKCKREFKYKAHLENHIISVHSQNGFTCDYCMQSFNDKNTLETHRDKHKTDKKHQCEVCKKTFYMLCTLKDHMRTHTGEKPFLCSVCGKGFSQKTNLAQHMRRHQGLKPFKCESCEKRFVSKGELEAHTRTHSGAHPFVCDECGNGFTTSSSLVKHRRIHTGERPYICDLCPMRFSASGTLKNHRRTHTGERPFQCSYCEKAFVQRNDLISHIRCHTGERPFVCSLCGQSFRKASGLKAHGRVHAPSAHPAHPPHPPHLLQEQSQDVLLNVHCQPTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00290902;
90% Identity: iTF_00290902;
80% Identity: -