Hfuc000844.1
Basic Information
- Insect
- Hemaris fuciformis
- Gene Symbol
- ZFX_1
- Assembly
- GCA_907164795.1
- Location
- OU015450.1:13637230-13643029[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.61 51 5.2 2.3 1 23 181 204 181 205 0.96 2 28 5.3 4.4e+02 2.2 2.2 1 23 251 273 251 273 0.95 3 28 7.4 6.1e+02 1.8 0.1 6 23 285 303 285 303 0.94 4 28 0.0023 0.19 12.8 0.2 2 23 312 334 312 334 0.94 5 28 1.6e-06 0.00014 22.7 1.0 2 23 357 378 357 378 0.97 6 28 4.9e-07 4.1e-05 24.3 0.5 1 23 385 408 385 408 0.97 7 28 0.0048 0.4 11.8 0.0 1 23 414 436 414 436 0.97 8 28 0.0001 0.0084 17.1 0.6 1 23 442 464 442 464 0.98 9 28 0.00013 0.011 16.7 7.2 1 23 470 492 470 492 0.98 10 28 0.88 73 4.7 5.1 1 23 607 629 607 629 0.95 11 28 0.0006 0.05 14.6 2.0 2 23 636 658 635 658 0.92 12 28 3e-06 0.00025 21.9 2.3 1 23 664 686 664 686 0.98 13 28 2.8e-06 0.00023 22.0 3.5 1 23 692 714 692 714 0.99 14 28 0.0048 0.39 11.8 2.7 1 23 720 742 720 742 0.96 15 28 3.2e-05 0.0027 18.6 3.3 1 23 748 770 748 770 0.95 16 28 0.075 6.3 8.0 0.1 1 17 776 792 776 792 0.92 17 28 0.099 8.2 7.6 1.4 2 23 838 858 838 858 0.97 18 28 1.7e-05 0.0014 19.5 0.0 1 23 864 887 864 887 0.95 19 28 3.2e-06 0.00027 21.8 4.3 1 23 893 915 893 915 0.97 20 28 0.0011 0.094 13.8 0.1 1 23 921 943 921 943 0.98 21 28 0.00015 0.013 16.5 0.1 1 23 948 970 948 970 0.97 22 28 0.028 2.3 9.4 0.2 5 23 979 997 976 997 0.95 23 28 0.00076 0.063 14.3 1.2 2 23 1158 1180 1158 1180 0.96 24 28 4.3e-05 0.0036 18.2 0.2 3 23 1188 1208 1187 1208 0.95 25 28 0.00019 0.016 16.2 1.1 1 23 1214 1236 1214 1236 0.98 26 28 0.0074 0.61 11.2 0.9 1 23 1242 1264 1242 1264 0.94 27 28 5.3e-05 0.0044 17.9 2.6 1 23 1270 1292 1270 1292 0.98 28 28 0.00012 0.01 16.8 0.4 1 23 1299 1322 1299 1322 0.96
Sequence Information
- Coding Sequence
- ATGAATAGGAAAACAAAACAGCGATTCGTTATGAACGCAAATGATAATCAGCCTTCGTCAACAGCCCAGAGACTACTGGAAACGATTGCAGCGGCTCAAGTCAATCTCGAGAATGTGCAAGAATTTTCCAATGTGTGTCGAATATGTGCCACCGACACCGAGTTTGTTATACCAATATTTGAAGGTGAAGGGTTGCAGAACAACCTTGCAGAGAAGATACAGAAGTATTTACCCATAACGGTCACAGAACAGGATGTACTGCCCAGAGTGGTGTGCTACCAATGTGCTAGTACATTATTTGCATGGCATGAACTGGTCAATTGCTGCGTGCAGGCAGATGCCGCACTTAAATCCCGTTTGCCAAAACCACCTTCTGCTCAACAGGATGTAAAACCATCTGTATCCGGAACCAGCCAACCTGTCAACACAAACCAAAAAACCAAGTGTGACACTCCCATAGAATTTTATGATAAGGTTAGAATTGTTCTGACTGATTACTATCACACATTGAACATTGATGAAAATGAATCAGATATGAAATACGTATGCCAGAAATGTACTGCAAAATCACTGACTACTACAGCCATGTTGGCTGATCACCTACATACTCATCACTATGATGAAGTCTGCAAAAACCTTGAAATGTGTATCAAAGAGTTTATAACATTTGAAGAAACTTTAATGTCTGAAGCGTCAGATCGTGAAGAGCAATCTGATAAAGAAGAAATGCCTGATAAAGAAATACCCAATTACTTCTGCCCATTCTGTGAAAATATTTACTCATCTCCAACGCGACTGCTCTGCCATTTGAATAAACACGTGGAACTGAGCTTAGAAGACGGTGTCATGTGCTGCGAAGTCATTTACAAGGATAAAAACGCGTTCGTAACCCATTTGCAAAAGGACCATGTGGATCGTGTCGCTACGAACAACGTTTGCAAAACCTGCGGCTACAGTACAAATGATGTCAATGATTTACAAAAGCACATCAATGATCTACACGTATCTGACAACTCTGTAAAAGAAAAGACGTCGCAGAGCATTAGGAACCAAAAGTACATCCCAGCCGTTTGTCCGGAATGTAACAAGACATTCTCCAACAAATACAACATGTTTGTACATCTAAAAAGCCATAGCGAAAAGAGTGCGATGTATTCCTGTGATAAATGTAATAAAGTTTACACAAATCCAGGCAATCTGAAGAGCCACCAGCGTCTGGCACATGAAGGGATTCTCAAATATGTGTGTTCTGAGTGTGGAGAAGGTTTCCCAAGCCGTGCCAGTCGCGACGTACACGCCAGGATACACTCCGGAGTAAAACCTTTCCGATGTGATCAGTGCGGCAAAGCATACCGAGCCAAGAACACGCTGGACCGCCATTTAGAAACCCATTTAGACCTGAGGAAATACGAATGCCACATCTGCAACAAGAAATTTCGAAAACGAACACATTTAAACTATCACGTGAGCACGCACGCAAAGAAAAGTAACGGAAGTTGTTTAATCGACGACGATGACGAACCACTGTCAAATCTAGCGAACAAAAAAACAAACGATCTATATAACAATTTTTACAAAGCTTTAGTAAACTTCAAAAACCATTTCGCTACCAAACATAAATCTTTAGAAACGTACCCACAGCTCACTGATTCTAGTGACTCGGAGGCTTTAGATGATATCGAAGAAAGTAACGTAAATGGAGACAGCATTGAAAACTACGATGATCTCTCACAGTGCAATATGAGAAAAGATCGCATGGACGAGGAGTCTAGGCTAGAACTCGTACAAGTACAGAGAAAAGTCAATGGAAAAGTGTACTACACTTGCAAGATATGCGATAAAAATTTAAGTTCCACTCACACTTACTTCTTCCACAAGCGAATTCATACAGGAGAGCGTCCCTGCGTGTGTCACGTGTGCGGGAAGCAGTTCCGAGCACCCAATGGCTTGCAGAGACATCTGACGGAAACACACGAGCGCCTCCGAAGACATACATGCCTGCTGTGCCCTAAGAAATTCGCGAACTCTCAGAACCTCAAACAGCATATGAGAATCCACACTGGAGAGAGGCCTTACGTTTGCGTTCATTGCGGAAAGCGGTTCACCCAGAGCGGCTCTTTGCACGTCCATTTGAAGACCCATAGCGAACAATATCCTCATCATTGTGCTGAATGTGGAGCCAAATTCAGACTTCGAGCTGGACTCACTCGCCATAGGCTAAAACATACTGGTGAAAGACCCCACGCATGCGTACATTGCGGGAAAGGGTTTAGACAGAGGCACGAACTAAACAACCACATAATAATCCACACGGACGCGAAGCCCCACACTTGCGTTGTCTGCGGAACGGCCTTCAAGCAGCGACGAGCTTTGAGACCGACTAAAATATCGTCAGCAAATCAGTTAAACGAAGACGAAGCACGCGAAGTCACGAAAGCTGAACTAAAAATATTGATAGACAAACATCCTAGGCGTCTAGTGAGTGTCGGCGAGGACGGTAAGAAGTACGCCAAGTGCAAGTATTGCGATAAGAACATCATTCTAAGTTCTTGGAAGCGTCATATCAGACGTCACGAGGGCGAGAAACGCTACAGCTGTCCCACCTGCGGGCTCGGGTTCAACGATAACGGCAATCTGGCCAGACACGTGAAAGCCTTGCACAGTAAACAGCGACCTCACGTCTGCGAGCTTTGCAACAAATCGTTCTCACGAAACAGTCACTTGCAAGACCACGTCAAATCGCATTCAGAAAGTAGAGACTTCGTGTGCGACGTTTGTGGAAAAGCTTCAAAATCGGGTGCGGCGTTGAGAATGCACCGGAGCACTCACAAGGAGTGCCGGTTCGAGTGCATGCAGTGCGGCGCCAGGTTCAAGCGGCGCGGCGAGCTGGCGGCGCACGTGTCGGTGCACACGGGGGAGAGGGCGCACCGCTGCGGCTGCGGCAGGGCCTTCCGCCTGCCCGCGCAGCTCGCCGCCCACGCCAGGGCGCACCGCCACCGTGACCAACAACATCTTGCGACCAACCAACCACACCTCCCAGAACCTATGTTCGAGCCCCATATGGTTGACAAACACCCTGGAATGGTGTTCCTCTGCGAAGAATGTGACTCTTATATCGGTATGGAAAACTTCCTGGTCCACATGACCGACCACGACAAGGAGTACACCAACGCAGCAAGATTTGCGCAGGAACAAAGCCAGGAACCGAAGGTTGTTCAAAATAAAAATAAAAAAGACGAGAATGACAACACTGCCCCGGAAAGTGTTCCGGAGACCCCGCCCCAAGATAACACCTCTCCCCCCAACGATACCACTAATGCCAATGAAAGTTCAAGCGAGCTCGGACCTATACCTGAATCAGCGATCGAAATTGTAGATGATTCCTGCGACAACACCACTGCCGGGCAGTCAACTGACCAACCAGCGTCGAACGACGGGGCACAAACGCGATCAAAATCGAAGAAATCCCGGACTTGTCCCATCTGCTCGAAGAGTTACAGGGCGTCATCCAGCTATTTCTATCACATGAAGAACTTCCACGGCAAGAAACAGGAGCACGGGTGCGACATATGCGGCAAGAAGTTCGCATCCAAAGCGAATCTGACGCAGCACGGCTTCATCCATTCGAAGGAGTACCGGTACGAGTGCAAGACGTGCTCGAAGCGGTTCAAGGGCCGCGCCAACCTGTACATCCACGCGCAGAGCCACGCGGGCACGCCGCGGCACGCGTGCGCGCAGTGCGGGCGCGGCTTCCGCTGGCGCTCCTCCCTCACCAAGCACGAGGCGCGCCACGCGGCCCACAAGGCGCACCGCTGCGACGCGTGCGGCCGCGCCTTCAGTACGCGCTGCGACCTCGCGCGGCACGCACGCACGCACGCACGCACGCGCGCGCGCTTCCCGTGCGACTCGTGCGGCCGCAGCTACGCACAGCAGCGCTACCTCAACGCGCACGTCACCACCAAGCACTCCGCGCCACAGAACAAAAACAACAAAAAAACACGCACTACTTAA
- Protein Sequence
- MNRKTKQRFVMNANDNQPSSTAQRLLETIAAAQVNLENVQEFSNVCRICATDTEFVIPIFEGEGLQNNLAEKIQKYLPITVTEQDVLPRVVCYQCASTLFAWHELVNCCVQADAALKSRLPKPPSAQQDVKPSVSGTSQPVNTNQKTKCDTPIEFYDKVRIVLTDYYHTLNIDENESDMKYVCQKCTAKSLTTTAMLADHLHTHHYDEVCKNLEMCIKEFITFEETLMSEASDREEQSDKEEMPDKEIPNYFCPFCENIYSSPTRLLCHLNKHVELSLEDGVMCCEVIYKDKNAFVTHLQKDHVDRVATNNVCKTCGYSTNDVNDLQKHINDLHVSDNSVKEKTSQSIRNQKYIPAVCPECNKTFSNKYNMFVHLKSHSEKSAMYSCDKCNKVYTNPGNLKSHQRLAHEGILKYVCSECGEGFPSRASRDVHARIHSGVKPFRCDQCGKAYRAKNTLDRHLETHLDLRKYECHICNKKFRKRTHLNYHVSTHAKKSNGSCLIDDDDEPLSNLANKKTNDLYNNFYKALVNFKNHFATKHKSLETYPQLTDSSDSEALDDIEESNVNGDSIENYDDLSQCNMRKDRMDEESRLELVQVQRKVNGKVYYTCKICDKNLSSTHTYFFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERLRRHTCLLCPKKFANSQNLKQHMRIHTGERPYVCVHCGKRFTQSGSLHVHLKTHSEQYPHHCAECGAKFRLRAGLTRHRLKHTGERPHACVHCGKGFRQRHELNNHIIIHTDAKPHTCVVCGTAFKQRRALRPTKISSANQLNEDEAREVTKAELKILIDKHPRRLVSVGEDGKKYAKCKYCDKNIILSSWKRHIRRHEGEKRYSCPTCGLGFNDNGNLARHVKALHSKQRPHVCELCNKSFSRNSHLQDHVKSHSESRDFVCDVCGKASKSGAALRMHRSTHKECRFECMQCGARFKRRGELAAHVSVHTGERAHRCGCGRAFRLPAQLAAHARAHRHRDQQHLATNQPHLPEPMFEPHMVDKHPGMVFLCEECDSYIGMENFLVHMTDHDKEYTNAARFAQEQSQEPKVVQNKNKKDENDNTAPESVPETPPQDNTSPPNDTTNANESSSELGPIPESAIEIVDDSCDNTTAGQSTDQPASNDGAQTRSKSKKSRTCPICSKSYRASSSYFYHMKNFHGKKQEHGCDICGKKFASKANLTQHGFIHSKEYRYECKTCSKRFKGRANLYIHAQSHAGTPRHACAQCGRGFRWRSSLTKHEARHAAHKAHRCDACGRAFSTRCDLARHARTHARTRARFPCDSCGRSYAQQRYLNAHVTTKHSAPQNKNNKKTRTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -