Hfuc004330.1
Basic Information
- Insect
- Hemaris fuciformis
- Gene Symbol
- -
- Assembly
- GCA_907164795.1
- Location
- OU015452.1:2846749-2847726[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3 3e+03 -1.4 0.0 29 40 2 13 1 14 0.81 2 2 2.5e-10 9e-08 32.3 0.0 1 38 16 53 16 58 0.94
Sequence Information
- Coding Sequence
- ATGCCTAGACAAACTCTATCTTCGATGAAAAAACAGAAGACCTGGGACCCTGAACAAATGAAAAAAGCAATCGAGGCAGTGAGGCATAAGGTCATGGGATATAAAAAAGCTGAAAAACTGTTTTCTGTGCCCAGATCTACACTGAAACGGTTAGTAAAGGATCCACAAGAGTCTTTAGAGTTAATTGTACACAAACCACTAGGTCGGAAACCTATACTACCACTTAGCCTGGAAGAAAAGTTAGTGGAATATATTTTATTTATGGAGGCTAGGTACTATGGACTCACTAAGATAGATGTTAGAAAAATGGCTTATCAGCTGGCGGTGAAAAATAATATTCAGAATACTTTCAAGAATGGAGTAGCAGGGCGTGCTTGGTTGGATCACTTTTTAAGGCGACATAAAGATCAAATATCCTTGCGTAGACCAATGGGGACATCATATGCTCGTGCTCATGGCTTTAACCGTGAAGCAGTTAAAGAATTTTTTGATATTTTGGAAGCCGAAATGAGTAAAACGAACTATCCTGCCGACAGAATTTTTAATGTCGATGAGACTGGGTTAACTATCGTACAATCAAAAGTACCACAAGTGTTAGGTAAAAAAGGGAAAAGGCAGATAGGAGCCCTGACTGCTGCTGAACGAGGGTCACTGTGTACTCTTGTCTGCTGCATGAGTGCATCAGGTATATTTGTGCCGCCTATGATGATTTTTCCAAGAAAAAACTTTACGGATATTTTGTTAAAAGGTGCACCTCCTGGAACGATTGGCAAAGTTCATCCATCTGGTTGGATTCAGTCCAATTTATTCACTGAATGGTTCAGGCATTTTATTGATAAAACTAGCCCTAGGGCCGAGTCTCCCATATTACTTATATTCGACGGTCATTATAGTCACACGCGCAACATAGAAATAATAGCGCTTGCTCGCGTAAACCATGTTACGATCATCAGTCTTCCACCTCACACAACTCATTAA
- Protein Sequence
- MPRQTLSSMKKQKTWDPEQMKKAIEAVRHKVMGYKKAEKLFSVPRSTLKRLVKDPQESLELIVHKPLGRKPILPLSLEEKLVEYILFMEARYYGLTKIDVRKMAYQLAVKNNIQNTFKNGVAGRAWLDHFLRRHKDQISLRRPMGTSYARAHGFNREAVKEFFDILEAEMSKTNYPADRIFNVDETGLTIVQSKVPQVLGKKGKRQIGALTAAERGSLCTLVCCMSASGIFVPPMMIFPRKNFTDILLKGAPPGTIGKVHPSGWIQSNLFTEWFRHFIDKTSPRAESPILLIFDGHYSHTRNIEIIALARVNHVTIISLPPHTTH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -