Basic Information

Gene Symbol
ct
Assembly
GCA_907164795.1
Location
OU015451.1:12540014-12546442[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.6e-32 4.1e-28 97.8 0.0 4 77 337 411 335 413 0.96
2 2 5.6e-31 4.9e-27 94.3 0.0 3 75 540 613 538 617 0.95

Sequence Information

Coding Sequence
ATGTGGGTGCAGAAATTCACCTCTGCCTACCTCTTCGGGGTATACAGGCTTGGGACTAAGGATGGCACACCAGGACCAGGATTTGGCCGACCCGATGGCGAAGGAGATGAACGACTGGCGCATATCCTGAACGAGGCCTCTCATTTGATGAAGACGCCTACAGGCCAACCTAACAACGATGACTCGAGGAGCAATGATGATTCCAGCTCTCCACGGACGCAGTGTCCTTCTCCATTCTCCAATAAGGACTCGAGTCAAAACCGAAGACTTAAGAAGTACGAGAACGACGACATTCCCCAGGAGAAGGTGGTTCGCATATATCAGGAGGAGCTCGCCAAGATCATGACTAGGCGGGTGGAGGACATGCGTCATAGTCGCGAGGGTTTCCCTGGCATGTTCCCACCATTTTTCAGTGGAGGCATGCCGCCGCACATGGAGAGACCGCCCGAAGACATCCGCATGGCCTTGGAGGCGTATCATCGGGAACTGGCGAAGATTCAACCCGGAGGTAACATCCCCAATCTGCATAACTTACCAGGAATGCCACCATTCCCCAACATTCTCGCACTGCAGCAGCAGGCCATGCAGCAAGCTCAGAACCAGCACATGAATGGCTCTGGAGCCATCCAGGACTTGTCCCTGCCAAAAGACAAAAATGCCAAAATGAATGGAATGACTGATAGCGATAAGGATAAACCGTTGGACGCCGAGGAGGCAATTAGACACGCGGGAAGCGCGTTCTCCTTAGTCAGGCCAAAACTTGAACCTGGACAGCAGTCGACAGGTTCCTCCGCGTCCAGCCCACTAGGAAATGCCATCTTGCCACCGGCAATAACGCCGAATGAGGATTTCAGTAGTTCAGCAGCAGCAAGCCCCTTGCAGCGGATGGCTTCCATAACAAACAGTCTGATCTCCCAGCCCAACAACCCTCCCCATCATCCACCGCCACAGAGGTCAATGAAAGCTGTCCTGCCGCCAATTACCCAACAACAGTTCGACCTCTTTAATAATCTCAATACTGAGGAAATCGTCCGAAGAGTGAAGGAAGCTTTGAGTCAGTACTCCATCAGTCAGCGGCTCTTCGGAGAGTCCGTTTTGGGGTTGTCTCAAGGGTCTGTCAGCGATCTGTTAGCACGACCGAAGCCCTGGCATATGCTGACACAAAAGGGCAGAGAGCCGTTCATCCGGATGAAGATGTTCTTGGAAGACGACAACGCTGTACACAAGCTAGTTGCGTCGCAATACAAGATTGCGCCGGAGAAGCTGATGAGGACTGGAAATTACAGCGGAGCACCTCCATGTCCGCCAAACATGACCAAGCCGATGCCGCCGACGCAGAAAATGATCTCAGACGCCACTTCTCTGCTAAGCAAAATGCAACAAGAGCAACTATTGGGGCCTGGCCACTTGGGCCACCTCGGTCAACCGACGCCATTACTACTTACTCCTCCGGGCTTCCCTCCTCATCACGCGGTGACCTTACCGCCGCAGCACCACGACAACAACAACAAGGAGAGGAAGCCGCCACCTCCACCGCAGCCCCATCACCCGCCGCCAGTCATGCGCAATCTACACCAACATATATCGCCGAGTGTCTACGAAATGGCGGCCCTGACACAGGATCTCGATACACAGACCATTACGACTAAAATTAAAGAAGCCCTCTTAGCCAATAATATAGGACAAAAAATATTTGGAGAAGCTGTTCTTGGCCTTTCCCAAGGATCTGTTAGTGAGTTGTTATCAAAGCCAAAACCTTGGCATATGCTCAGCATTAAAGGCAGGGAGCCATTTATCAGAATGCAGTTGTGGTTGAGCGATGCGCACAATATTGACCGTCTTCAAGCGCTTAAGAATGAAAGACGAGAGGCCAACAAACGACGGAGATCTAGCGGTCCGGGACAAGACAACTCGTCAGACACATCATCCAATGATACTTCTGAATTCTACCACTCAAGTTCACCTGGCCCCACAGCTGGAGCGCCATGCGCAAAGAAACAACGAGTTCTGTTCTCAGAGGAACAAAAAGAAGCATTAAGACTGGCCTTCGCTTTAGATCCTTACCCAAACATGCCAACGATAGAATTCCTTGCAGCTGAACTAGGATTATCAACACGAACCATAACAAATTGGTTCCACAATCACCGAATGAGGCTAAAGCAACAAGCCCCTCATGGATTACCTGCAGAGCCACCAGCAAGGGACCAGTCATCTGCGCCTTTTGACCCAGTCCAGTTCCGACTGCTCTTGAATCAGAGATTGTTGGAACTCCAAAAGGAAAGAATGGGGTTAGCCGGTGTGCCGTTACCCTATCCGCCATACTTCGCTGCCAACTCAAATTTAGCTGCACTGATAGGTCGTGGTCTCATCCCTCCTGAGGAAGGTGGGAAAGACCAGGCAAGCGGACTCGATTTAACGATGCCTTTAAAACGCGAGCCTGACGGGGACGATTTTGAAGATGACGATGTAGAAAGCAACCTCGGATCCGAGGACTCAATGGATGACGAATCAAAGACTGAGCCGAAAGCGGCGTCCACGCCCCATGCAGGCGGACGTTCGAACAGGCGAAAACCGGCGGCACCGCAATGGGTGAATCCTGACTGGCAGGACGAGAAACCCCGCAACCCTGATGAAATCATCATCAATGGAGTTTGCGTGATGAGAAGCGACGACTTCAGGAGAGAGTCAGAGGAAACAGTACGTGTGGAGCCTTCTCCAGTTCCGCGCGAAACGTCTCCCGCGCCCCGCACGCCGCTGACCCCGCACACGCCGCGGCCCCCGCACACACCCGACGACGTCATCCCAGAAGACAAAATCAAATCAGAGAACGATGACGACCGATGGGAGTATTAA
Protein Sequence
MWVQKFTSAYLFGVYRLGTKDGTPGPGFGRPDGEGDERLAHILNEASHLMKTPTGQPNNDDSRSNDDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDMRHSREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFPNILALQQQAMQQAQNQHMNGSGAIQDLSLPKDKNAKMNGMTDSDKDKPLDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFSSSAAASPLQRMASITNSLISQPNNPPHHPPPQRSMKAVLPPITQQQFDLFNNLNTEEIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMTKPMPPTQKMISDATSLLSKMQQEQLLGPGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPQPHHPPPVMRNLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEEGGKDQASGLDLTMPLKREPDGDDFEDDDVESNLGSEDSMDDESKTEPKAASTPHAGGRSNRRKPAAPQWVNPDWQDEKPRNPDEIIINGVCVMRSDDFRRESEETVRVEPSPVPRETSPAPRTPLTPHTPRPPHTPDDVIPEDKIKSENDDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00947788;
90% Identity
iTF_00947788;
80% Identity
iTF_00787504;