Basic Information

Gene Symbol
Kdm5d
Assembly
GCA_907164795.1
Location
OU015456.1:10083113-10093405[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.1e-26 3e-22 79.3 0.0 2 89 101 184 100 184 0.94

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAGGCTAATGTCGAAGTTAGCATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTCACGTTCACCCCGCCTCCAGAGGCTCCTGTCTTCGAGCCAACCCCAGAAGAGTTCCTGGACCCACTGGCGTATATCAGTAAAATACGACCTATCGCCGAGAAATCGGGCATTTGCAAGATAAAACCACCAGCGCACTGGCAGCCACCGTTCGCTGTGGACGTAGACCGGCTCCGGTTCACGCCGAGGATACAACGACTCAATGAGCTTGAGGCTATCACAAGAGTGAAGTTGAATTTTCTCGATCAGATTATCAAGTTTTGGGAGCTCCAGGGTTCACACCTCAAGATCCCTACAGTAGAAAGGAAACCACTGGATTTATATTCATTACACAAGATTGTACGTGAGGCCGGTGGCTTCGAAATATGTTCCTCTGAACGCAAATGGTCGAAGATAGCGCGGCGCATGGGCTACCCTCAAGGCAAGGGAGTCGGCTCCATACTAAAGAGCCATTACGAGCGCATTCTGTACCCTTACGATGTGTTCAAGAGCAACGGTGCCGTGGGAGACAATAAGGAGACGAAGATCGAGGTGAAGGGCGAGCAGACGCCGGAGAAGGCGTCGGGCACGCGCAGCCGCTCCAGCAGCAAGTGCGGGGGCAGCGCGGCCGCCACGCCGCCGCCCGCGCGCCGCTACAAGCCCGAGCCCGAGCCCGCGGCCGAGGGCAGCCACGCGGAGGGCGCGCTGCCGCCCGGACACTTGCCACCCGGACACCCCGCGCCCGGACACCTGCCGCCCGGACACCTCCCCGCGCTGCACACGCCCGTCAAGGACGAGCCCTCCGACACCAGGCGCACAAGTCAGTATACATACAGCGCTACGGGGACCATTTGGCACATGGCCAAAATCGAAACTATCGCCGCCATCTTGTAA
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTPPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSHLKIPTVERKPLDLYSLHKIVREAGGFEICSSERKWSKIARRMGYPQGKGVGSILKSHYERILYPYDVFKSNGAVGDNKETKIEVKGEQTPEKASGTRSRSSSKCGGSAAATPPPARRYKPEPEPAAEGSHAEGALPPGHLPPGHPAPGHLPPGHLPALHTPVKDEPSDTRRTSQYTYSATGTIWHMAKIETIAAIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-