Hhel015043.1
Basic Information
- Insect
- Helleia helle
- Gene Symbol
- Zfy1
- Assembly
- GCA_963853865.1
- Location
- OY971424.1:2318242-2343239[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.044 4.6 8.7 3.8 1 23 306 328 306 328 0.95 2 11 6.8 7.2e+02 1.8 2.3 1 23 335 358 335 358 0.87 3 11 3.5 3.7e+02 2.7 3.9 1 23 362 384 362 384 0.93 4 11 0.0034 0.36 12.2 5.8 1 23 389 412 389 412 0.97 5 11 0.025 2.6 9.5 0.3 1 23 416 439 416 439 0.88 6 11 1.9 2e+02 3.6 0.1 3 21 453 471 452 476 0.86 7 11 0.41 43 5.7 0.1 2 23 512 534 511 534 0.93 8 11 1.5e-05 0.0016 19.7 0.3 3 20 550 567 549 570 0.93 9 11 9.9e-05 0.01 17.1 3.3 1 23 576 598 576 598 0.98 10 11 0.0004 0.042 15.2 5.3 1 23 605 627 605 627 0.98 11 11 0.0022 0.23 12.9 4.3 1 23 633 656 633 656 0.92
Sequence Information
- Coding Sequence
- ATGATTTCAGAAACAAAATTTTTATCACTGCAATGGGCACCAAATGATGATCATGTCACATGTACAGTTGAGgatGCAAATGAAGAATTGGATGCCCCAGCATCACTGCAGGTTTGCAGGATTTGTCTAGCATTTGATGTCAAAATGTATCATATTACCGACTATAAGCTtagtaaatattttcaacaaataaCTGGTATTTTGattcatCCTGATGACAGGCTACCAAAGATGTTATGTTGGGAGTGCGTAGGGAGACTCACATCTGCCAATATATTCAGAGATAAAGCACTTCGGTCCCACAGCCTGCTGTCAAGGAAAGTAAACATGAAaacctatATGACTATGAGAGATGTAAAATCAATAAACAGAATATTTAACAGACTTCAGTCTACTCTCTCTATGGAATTTTTTGAATGTGATGACAGCAATCTGACAATACATACCGATGAAGATGTTAAATCCGAGTGGGAAGTAGAATATTTAGAGCATGATTTTACTGATGACAATGAAGAAGAGATTACACGGGATCTGGTGCTGCAAGTTAAAGATCTCTATGATGAGGAATGTGATGGAAatgagtctgatgatgatggtttgaATGTGATAAAGAGAAAATCTAAAGTGAAGTACAAGAAGACTGTGGACGATGATAGTCAATCTGTTACCACACGTAGcCGGCTAAAAGGACCGACCGTACGTCGTAAGCGCTCAGTGGACAACGAGATTGTGCAGGCCGGCTCGTCGACGCGCACGGACAAGCCCCGCCCACTACCCGCATACAGGAACAAGAGCAGCCCCGGAGCCGCGGGCGGACTGGACGAGACGCTGTTCACGATCACGGCGCTGACACAAGCGGAGCAGGTAGCCGAGGTGCAGCGCCGTCGTGACTCGCACGCCTACCGCACCGCGCGGTACCGCTGCACCGTATGCTACAAGGTGTTCCACTCACAGACCAGCTACGACGAGCACGCATTCAAACACTCCGACCGGTATGGCGCGTTCGAGTGCTCGATCTGCAGGATCCGCGCGAAGACGGCACGCATATTGCGCAAGCACTTCACGAATTGCCACACGCGCCGCTTTTCCTGCAATAAGTGCCCCTTCACCACCAGGAACAGgTGTGTAGCGACAGGGCACCAGAAGTACCATACAGGAGTGACGTACCAGTGTCCGCACTGCCACAGACAGTTCGAtaaGTCGACGACGTACTTCGGGCACATACGCCTCAAGCACGTGTCGCGGTTCGTGTGCGAACTTTGCGGGTATGCCTTTATCAACCAGAGGGGCATCGACGTACACAAGTTCAAGAAGCACAAGCTACTCGCCGGAAACGTGGAGCTGACGGGTCCATACTGCGCGGAGTGCGACGTGCGGTTTGTGTCAGAGGAGGCACACGCGCGCCACCTGCAAATGTCCGCCGTGCACAGCACTGATAATGACCGAGAGGGCCGCATCAACGACCTTTATTTTGCGGAGCGCGCGGACGAGCGTATGCAGAAGACGGACACCAATAAGAAATACAGGACCGTCTCCTGCGAGCAGTGTGGCGAGATACTGGCGGATTACCGATCGTATTTGCAGCACTTCCTGCGCATGCATCCGGGCGTCAACAGCACCAAGTATATCAGGCACGCGTCGCGCATGTGCGAGCAGTGCGGCAAGATCTTCAAGAACAGTGTGAATCTGCGCAGCCACATGTGGGTGCACACGGGCGAGAAGCCGTTCAAGTGCGCGCACTGCGACAAGACCTTCACCACCAAGACGGTACTGGACCTGCACGTCAAAAGACACACCGGCGAGCAGCCCACCTTCATGTGCCATATCTGTGGCAAGCACTTCACCTTCGACTACAACAGGAGCAGGCACATGCTAATCCACACGGGGCTGAAGCCATTCCAGTGCGAGACGTGCGGCAAGTGCTTCAAGACGACTACGGAACAGCGCTCGCACGTCGCCCACGTGCACCTCAAGATACCCTGGCCCAAGAGGACGCGCGTCCGGCCCCCTGCGCCGCCCCGCGACCATGTTTGA
- Protein Sequence
- MISETKFLSLQWAPNDDHVTCTVEDANEELDAPASLQVCRICLAFDVKMYHITDYKLSKYFQQITGILIHPDDRLPKMLCWECVGRLTSANIFRDKALRSHSLLSRKVNMKTYMTMRDVKSINRIFNRLQSTLSMEFFECDDSNLTIHTDEDVKSEWEVEYLEHDFTDDNEEEITRDLVLQVKDLYDEECDGNESDDDGLNVIKRKSKVKYKKTVDDDSQSVTTRSRLKGPTVRRKRSVDNEIVQAGSSTRTDKPRPLPAYRNKSSPGAAGGLDETLFTITALTQAEQVAEVQRRRDSHAYRTARYRCTVCYKVFHSQTSYDEHAFKHSDRYGAFECSICRIRAKTARILRKHFTNCHTRRFSCNKCPFTTRNRCVATGHQKYHTGVTYQCPHCHRQFDKSTTYFGHIRLKHVSRFVCELCGYAFINQRGIDVHKFKKHKLLAGNVELTGPYCAECDVRFVSEEAHARHLQMSAVHSTDNDREGRINDLYFAERADERMQKTDTNKKYRTVSCEQCGEILADYRSYLQHFLRMHPGVNSTKYIRHASRMCEQCGKIFKNSVNLRSHMWVHTGEKPFKCAHCDKTFTTKTVLDLHVKRHTGEQPTFMCHICGKHFTFDYNRSRHMLIHTGLKPFQCETCGKCFKTTTEQRSHVAHVHLKIPWPKRTRVRPPAPPRDHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -