Hhel000657.1
Basic Information
- Insect
- Helleia helle
- Gene Symbol
- ZNF212
- Assembly
- GCA_963853865.1
- Location
- OY971414.1:8188633-8190934[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.24 26 6.4 0.1 5 23 351 369 350 369 0.96 2 11 0.01 1.1 10.7 0.0 3 23 377 397 376 397 0.92 3 11 2.2 2.3e+02 3.4 0.9 3 23 406 426 404 426 0.79 4 11 7.3e-06 0.00077 20.6 2.0 2 23 431 452 431 452 0.98 5 11 0.00017 0.018 16.3 3.2 1 23 455 477 455 477 0.98 6 11 0.0028 0.3 12.5 0.0 1 20 481 500 481 502 0.95 7 11 0.00012 0.013 16.8 1.3 1 23 539 562 539 562 0.96 8 11 1.2e-05 0.0013 19.9 0.3 1 23 583 605 583 605 0.98 9 11 0.00012 0.013 16.8 5.2 1 23 611 633 611 633 0.98 10 11 0.0032 0.34 12.3 0.2 3 23 641 661 639 661 0.98 11 11 6.1e-05 0.0065 17.7 2.9 1 23 667 690 667 690 0.96
Sequence Information
- Coding Sequence
- ATGGAATCGTGGTCAAATTTGTGCCGATGTTGTTTGTCCCCCAATTCAGAAGTGTCActgttaaataacaaaaataatgtgaaaGACATTTTTTTGGAATTAACAACCATTGAGGTTAAAGAAGATGATGGGTTACCTCAAAAACTTTGTCTAGAATGTTTCTCAATCATGACTTCAGCATATCATTTCCGTACACAATGCATGAAAATGGATAAGGAACTAAGAGTACAACTCGatgcaataataaaacaaacaaaacacattATCTCACCTCAGTTTTCTGAGATAGATGCTCAAGTAAAGTCTAATGGGGACATATCTGTTGAAGATATTGCCAAAGAGTCGATGAAACAACTAGAATGTATTATGAAAAGTGAACCTAAGGATGACgacgattattattatgtccTAGTTATAGACAACTCAAAAGACAAAGATAGTGATCTAAAGAAGGAAATTAGTGAAAAGTTTCATACCAAAAAAGCATTAAGAGAAGTTAGCCAATTTGAAAACTGTGTTGATTCATTCATTGTGTCAAATACACATAATCCCAATAATGTGCCAGCtgcaatattagataataacgAAAGAGATAATGAGAGTCACTTCAAAATGGATATTGATGCCAATCAGGAAGCAGAAGAACAGGAATTATCATTTGTGCAAAATGAAGGACTAACAATTATCGAAAAGCCTTCAGTAACTGTTGTAGAAGATACTCAAGGACAATCTACGGATGACTATTCTGTAGCACTGACTGAGAAAGATGTAGAGAActctaaaaatatcattaaaatattgtcaCCATCGGGCAGTGAACAAGCAATATTTTTAAAGGATGATGACAGTATCAAATACTTGACTGATGCTCAACTGTCCAAGTCTGACAATACCGATATGCTGCAAGAACAGCAGGTTATATTCTGTGAAGAAGAAGACTCATCTCAGTTTCAAATACTTGAATGTGATGGATCAGAATTAGTCATAGAGTATACTGATGAGAGTCAAAATGCCACTGTCCTTCAGCAGGAGGATGGTACATTTCTCTGTGATTGTGGAGAACAGTTGGATGATTTAAGTCAGTATGAAGAACACCAAAACAAACATAATCTAGCGGGAGATCTTCTATGTAATTTATGTGGTAAAAGTTTTGAGACACCTGAGATTCTGGCTGGTCATATGGTCTTGCATAGTGTTACTACTGTATTTGTCAAATGTCTGTTTTGCAGTCAACTTGTTAAAAGGAAAAATTTGACAGAGCATatgaaatatgtacataatagtaAGCCAAAATGTAATGTTTGTCTAAAGACATTTGCTAACCAAACTAAACTTAAACGCCACATGCTGATGCATAAAGAGTTTGAATGTGACATTTGTCACAAGcgatttgccaaaaaaataacaATGCAGACACATAGATTGACACACATTAACCCCTATGAGTGTAATCAATGTGGTGGTATTTTTGAAAACAAAGAAAGCCTAGCAGCGCATAAAGATAATGAGCAGTGCTCTAAATCGAAGGTGCAAAAAGTAAACAACAGAGTCAACGAGGAACTTATGAAGACTGTCAAACAAGAAGTGACCAATAATTTAGGAAAATTACTAGGTTATGCCTGTTCTCtttgcaaaaaaatgttttcacatGAATCAGCATTTGTACAGCACATTGAAAGTACACATATTGAAAAGTTTGATGTGAGCTCAGATGATCAGTCCCTTAATAGAAAGGCGGCTAAAAGATTTACATGTAGTATGTGTGGCAAGGGATGTGTGAGCCCTGCATTGTTAATAAGGCATGAAAGAGTGCATACCAATGAAAGACCATATCCATGTCAGCGATGTTCTTTAcgatttaaaactaaaactcaTTTAAAGACTCACCAACTAACACATACTAGGGAAAAGAAATTTGGTTGTTCTGTTTGTATGAAATTCTTTGCCCTAAAGGGTAATTTAGTTGCTCATGTACGGACACATAGTGGTGAAAGACCTTATGTATGTCATTTGTGCAATGAAGCATTCATTGATTCAAAATACCTCAAAAGGCACAAGCTAAAGAAACATGGAATAGATAACCTCCCATGGAATCAATATAGTACATAA
- Protein Sequence
- MESWSNLCRCCLSPNSEVSLLNNKNNVKDIFLELTTIEVKEDDGLPQKLCLECFSIMTSAYHFRTQCMKMDKELRVQLDAIIKQTKHIISPQFSEIDAQVKSNGDISVEDIAKESMKQLECIMKSEPKDDDDYYYVLVIDNSKDKDSDLKKEISEKFHTKKALREVSQFENCVDSFIVSNTHNPNNVPAAILDNNERDNESHFKMDIDANQEAEEQELSFVQNEGLTIIEKPSVTVVEDTQGQSTDDYSVALTEKDVENSKNIIKILSPSGSEQAIFLKDDDSIKYLTDAQLSKSDNTDMLQEQQVIFCEEEDSSQFQILECDGSELVIEYTDESQNATVLQQEDGTFLCDCGEQLDDLSQYEEHQNKHNLAGDLLCNLCGKSFETPEILAGHMVLHSVTTVFVKCLFCSQLVKRKNLTEHMKYVHNSKPKCNVCLKTFANQTKLKRHMLMHKEFECDICHKRFAKKITMQTHRLTHINPYECNQCGGIFENKESLAAHKDNEQCSKSKVQKVNNRVNEELMKTVKQEVTNNLGKLLGYACSLCKKMFSHESAFVQHIESTHIEKFDVSSDDQSLNRKAAKRFTCSMCGKGCVSPALLIRHERVHTNERPYPCQRCSLRFKTKTHLKTHQLTHTREKKFGCSVCMKFFALKGNLVAHVRTHSGERPYVCHLCNEAFIDSKYLKRHKLKKHGIDNLPWNQYST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00926004;
- 90% Identity
- -
- 80% Identity
- -