Hhel007359.1
Basic Information
- Insect
- Helleia helle
- Gene Symbol
- -
- Assembly
- GCA_963853865.1
- Location
- OY971418.1:8041312-8042418[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-09 4.7e-06 27.1 0.0 6 42 2 37 1 39 0.85
Sequence Information
- Coding Sequence
- ATGCTTAAGGCCCTTCAATTGCATAGAACAGGCGAAAGTATTAGAAAAGCAGCGAAAACTTATGACATTGCGTACCCAACTTTACGACGCTACGTAGAAAAAAACTTGCACGTCAACGTAGAGGACCTTGCTAGGAAGAGATTGCTACCGAATTATGAAAATCATCTCATTTTTACCAGCGAACAAGAAGATGTTTATAAAGAGTACATTATAGAATGCgctttaaaattttatggaCTGACCCCAAAAGACTGTCGTAAAGTAGCGTACCAAATGGCGATGGTAAATAACATAACTATCCCATATAGTTGGCAGCGAGAAAAAATGGCAGGAAAAGAGTGGTTTCGGTCATTTAGAAAACGTCACCTTGACCTTTCAATAAAGAAACCTGAAGCTTGCAGTTTAGCCCGTGCGACAGCATTTAACAGGAAGACGGTCACATCATTCTTTGATAATCTGAAGACGGCAATGAGTCGTCATGCGTCCTTCAGTTCTGGTTGCCGGTTGTACAATTTAGATGAAACAACAACGACAACTGTCCAGTGTCCACAAAAAGTTGTAGGGCCTAAGGGAAAACACAATATTGCGAAGGTCACAAGTGGCGAAAAGGGAGTTTTAGTAACCACATGCCTTATAGTATGTGCTTCAGGTCAAGCCTTACCGCCTGCGCTTGTATTCCCGCTGAAAAATTTCAAAGACATCATGTTGAGAGGTGCTCTTCCAGGTTCTCTTGGGTTGGCACATACTTCGGGGTGGATGACATCTAATTTATTTGTTGAAATTATGAAGCATTTTATCAAACATACCGCTGCTAGCCTAGAGAACCCAGCACTCCTAATCTTAGATAATCACGAGTCACATCTGTCATTCGAAGCTTTGGAATTAGCAAAAAGTTCAGGTGTCACAATTCTTACATTGCATCCTCACACCACAGCCAAAATGCATCCTCTAGATGTCGGATTAAATGGCCCCTTTAAAGTCTATTATAACAGCGCAATCGACTCCTGGATGGTGAGACATCCAGGAAGGTCTATGACTATCTACGATGTGGCGGAGTGTGTTGGAGAAGCCTACGCTAGAGCCTGTGAACATTTTCGCAGCTTTTAA
- Protein Sequence
- MLKALQLHRTGESIRKAAKTYDIAYPTLRRYVEKNLHVNVEDLARKRLLPNYENHLIFTSEQEDVYKEYIIECALKFYGLTPKDCRKVAYQMAMVNNITIPYSWQREKMAGKEWFRSFRKRHLDLSIKKPEACSLARATAFNRKTVTSFFDNLKTAMSRHASFSSGCRLYNLDETTTTTVQCPQKVVGPKGKHNIAKVTSGEKGVLVTTCLIVCASGQALPPALVFPLKNFKDIMLRGALPGSLGLAHTSGWMTSNLFVEIMKHFIKHTAASLENPALLILDNHESHLSFEALELAKSSGVTILTLHPHTTAKMHPLDVGLNGPFKVYYNSAIDSWMVRHPGRSMTIYDVAECVGEAYARACEHFRSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786698;
- 90% Identity
- iTF_00744541;
- 80% Identity
- -