Hhel028490.1
Basic Information
- Insect
- Helleia helle
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963853865.1
- Location
- OY971436.1:3506178-3527022[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-15 2.7e-12 47.1 0.0 1 40 175 215 175 219 0.92 2 2 2.4e-18 1.4e-15 57.6 0.0 1 43 380 423 380 425 0.95
Sequence Information
- Coding Sequence
- ATGGGGGCTACACATTCTAATTCTAACTCGCGGCCTCGACCAATGGCGGCCGAGGACGAACCAACATGGCGGTCGTGGGAACCGAGTCCGGCGTCAGAATCGGACAGCAGTTCTGTGTCGGGCGCGAAGAGTCCGGCTGGTCATCCCTTGCTGCAACACCTCCTGCAGCTGCAGCTGCAGGGACAGAACCCTCAGGCGATAGCACAGGCGTACACGGAGATGTGTGTGCAGTTCCAGCAGATGATCACGGCGCTGGCTGCGCTGGGCACGGGGCTGGTGCCGCCCGCGCTCTCGCAGGCCTGGATGATGCAGCGGCTGGCCTCGGCGAGGCCACAAGTCGACAGGATACCGGAGGGGGAGAAGGCGGCACCATCGTCCCCCACCGCAGAACAGCCCCTCGACCTGAGCGCCAAGTCCACCTCCAGCACCAGCGGGACCCCCCCACCGGATGGCAAGAATGACAACTCcagATTAAAACGAGCGGTCCTAGAGGGAGCCGGCAACAGTGCGAGACGAGCGTACACCGAGGATGAGCTGCAGCTGGCCCTGCGAGACATCCAGTCGGGGCGGCTGGGCACACGGCGCGCCGCCGTCGTGTACGGCATCCCCCGCTCCACGCTGCGGAACAAGGTCAACAAGTTCGGCCTCACCACCGAAGCACAGGAGTCTGACAATGACAGCGATCCTGAAAAACCAGACTCGCCTCCGTCGGTCATCCTCAAGATACCGACCTTCCCACCGCCCGACGACAAAAGCCCGTCACCGGCGATACCCGTGACCACCCCGGTCACACCCCTCACCCCCATCATCCAGCCCCCGCTCAACGCGCCCTCGCCGCTCCTCCTCCCCGCGTCGGTGTTCGCGGACCCGCCCACCAACCAGCACCTGTTTACGTCGTTGAGCGACGTCATAGCCAAGAGCATTAGCCAAAAGTTCCAACAGCCCCTGGACAGGCCCCAGGCGGACCTCCAATACATGCGGGCGCCTGACCGCCACGTGTCCGTCATCAAGACCCCGCCCGACAACCAGAGGAACTACGCGATGCCGAGCAACTCGAAGGGCCCGACGAACAACAACGGCCAGCCCGCCACCGGCGGCAAGGGCACGCGGCCCAAGCGAGGGAAGTACAGGAACTACGACCGGGACAGCCTCGTGGAGGCCGTGAAGGCGGTGCAGCGTGGTGAGATGTCGGTGCACCGCGCCGGCTCCTACTACGGTGTGCCACACTCCACGCTCGAGTACAAGGTCAAAGAGCGGCACCTCATGCGGCCGCGGAAGAGGGAGCCCAAGCCGCAGCAGGATATCAAGACGCAACCGCCTAAGCCGCCGCCGAAGCCCCCGAGCAAACCGTTCACGAACGGCCTCAACGGCCCCGAGCCCGGTTACCCGCCCGGCTACCCCTTCTGGACGGGCGGTGGGTTCGCGCCCCCGCCTGCGCCCGACCTGTACGCGTCGCACATGATGCGACGGCTGCGCGAAGAGGCGCCGCCGCCCGCCAACGGCTCCTTCCTCGAGGGCATCATCCGGTCGAGCCTGGAGCGGCCCGGTGCGGCGCTGCTGCAGCGACTGGGCGGGCCGGCGCCCCCGTCGCCGCCGGGAGGGGCGAGCGCCGGCGGGGGAGCCCTGCGGCGGCGCGCGGAGCCCGGAGACGAGCCTGCGGTGCGGCGCCCGCGCCTGGACGCCGATCACCAGCTGGCGGCCGACATGCGAGAGACGGTGCAGCGACTGCGCGCGGACAAGCTGCGCCCGCGCAACGGCACGCCCACACCGCCGCCCGACGACCGCGCCTAG
- Protein Sequence
- MGATHSNSNSRPRPMAAEDEPTWRSWEPSPASESDSSSVSGAKSPAGHPLLQHLLQLQLQGQNPQAIAQAYTEMCVQFQQMITALAALGTGLVPPALSQAWMMQRLASARPQVDRIPEGEKAAPSSPTAEQPLDLSAKSTSSTSGTPPPDGKNDNSRLKRAVLEGAGNSARRAYTEDELQLALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLTTEAQESDNDSDPEKPDSPPSVILKIPTFPPPDDKSPSPAIPVTTPVTPLTPIIQPPLNAPSPLLLPASVFADPPTNQHLFTSLSDVIAKSISQKFQQPLDRPQADLQYMRAPDRHVSVIKTPPDNQRNYAMPSNSKGPTNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDIKTQPPKPPPKPPSKPFTNGLNGPEPGYPPGYPFWTGGGFAPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLGGPAPPSPPGGASAGGGALRRRAEPGDEPAVRRPRLDADHQLAADMRETVQRLRADKLRPRNGTPTPPPDDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01078995;
- 90% Identity
- iTF_00925649;
- 80% Identity
- -