Hhel010949.1
Basic Information
- Insect
- Helleia helle
- Gene Symbol
- JARID2
- Assembly
- GCA_963853865.1
- Location
- OY971420.1:20304351-20321410[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-19 1.4e-15 58.3 0.1 6 89 609 689 606 689 0.93 2 2 8.7 2.2e+04 -3.3 0.0 56 84 777 806 771 808 0.57
Sequence Information
- Coding Sequence
- ATGAATGAGACACCTAGACTACCCCCAGTTAAACCCATTTATCTTAACGAGTATATTCACAGACACATACAACCTATAGTGTTAGTAAAAAGACTCGAAAACACTTTAGAAGCAATTCAAAAGGAACGACGCATTCACAATCATTCAACACAAAATCAAACGATTGAAAATCAGAATGCCATAAAATTGCCTCCTCATACAATTACCTCCTCAGCACAATTCACAAAAAAGGCTTTGAAATTTACTATACGTCGGAGCAGCAGACTTCGATGTAAGCCATCTCTGAACTTTAAAAAAGCCACTTTATCTACAAATAACATTAAACCCAAGGGTAAAATTATTACCACTAAGAGAATCATCAAATATGTGAAGGCTCCAGATGACACAGctgATGTGCTATCCGCATTAGAAACAGAACCATCCAGCGAGTCTGTCCAAGTTCAAACAATTCCAGCTAGTACAGatTCTAATAACGCTGCGCTATATTACGGGACCAACAGTATAGAACGATGGATATCAGAGAGCACAAAAGATATCACTCAAAGTAAAGATTGTAAAATACCCGAGGTGccacaaaagaaaaagaaaattgatgaaagtgctatgaaaactccaaacgtttcaaaaaatattaactcACCAAAGCATACCTGTTCAGAAAAAAATACCCGCCCAGCAAGTGATATATTTTGCCTAGCACATAACAACCTGCCCCAAAAAACTACTCTGCCAACAAAGACTACCCCTCCAGCAAAAACTGTTCCGTCAAAAAAGACTCAGTTAGTAAAAACTGCTTCGTCAGCAAACGATGCTCTGCCAGCAAACGATGCTCCGCCAGCAAACGCTGCCCCGCCACCAAACGCTACTCTGCTAGCAACTGCTGCTCCGCCAGCGGAGACTACTCTGCAAGAGGATAATACATCTCCTGAAAAGAAAATATGTCCATCGGTCAAATTTTTATATCTCAAAGATGTTTTGTCAGCGTCCCAAGAAGATATTGACATTATCTGCAATAACTGCCCAAGATGTGAAATTATCAAGAAGATCGTTGAGTTGTCCACTCTTATCCAAGACACGCGTAAAACTACCCGAAGTGGCACGTTAGACAATGATCCTCACACGGATATGACTGTGTCTGCACACACCAATATACCAAGCCCGCTTGTCCACGGCACTAGCAGCCGCGCAAACAATGAGGATGGACAAGGGTTATTCTACATAGACCTCTTACCTGCAACGAATAAAACAGTGGAAGTATCGTGGTATAAAATGCCGAACCGTAGAGATTCGCTCATGAGGACTCGTCTCGTACCGAAAACTAATTTGACGACTCCCTATGAAGTAACACTCTCAAATAATGATACACTGTTAAACAAATTACTTGAGCTGTATAAAGAGAAGCTGCATGAAACAAACTTGCCACAGGAAACCGAAGACGTAGTTCTCGTTAACGTTCCAGAGACAAATGGTGATAAGCAACCCAGTGTAACCCAACCAACAACCTCATCAGAGAAAAGACCACATCCTAATGATAGCACGACGAATGATGCCAAGAAgaagaaaatagaaaataattttccTAGAAGCTTAGATCGTGCGAAGCTTGTAGACGCTCCAGTATTTTATCCTACCGAAGCTGAATTTACAgACCCAATAAGTTATTTCGAGAAGGTGATGCCAATAGCGTCCCAGTTCGGTATATGCAAGGTAGTGCCCCCCGCCGACTTCGACCCTGCGTGTACGCTTAGCGAGACCAATCGCTTCACCGTCACTAACCAGTACATACCGCGTCTGTACACCCGCTGGGGGCCCGCGTTTCGGGAGATGTGCGCGATACGATCGTATCTCGCCTCGCAGAATGTTCACTTCACGAGGGCTCCACTGTTAGAGGGTCTCGAAGTAAACTTACCAAAAATGTATCATACAGTGCAGCGGCTTGGTGGATTGATGAATGTTAGTGATAAAAAGAGGTGGAACCGAGTCGCCGAAAAAATGCATTTCTATCAGCTTACGAATCCGAGGAAAAAGCTGGAACCAATTTATGTTAAATACCTCCTGCCGTATGACACTCTGACCAACAGAGGAAGGCAATTGAAAGTATCTGAGGTAGAACAGATGTGGCAAAGGAAAAACAAGAAGATGCTGGCTCGAGCTATCAACCCGTTGGTCCGGAAAAAACGTCTGCTTGGCGACTCCAATTCAGACTCGCGCTCCGATCATGGCGTGGGTTCTGATTCGGACGAGGAGACCTCGGACCACGCGAATGACCCGCTGGCTGAGGCCGAAGAGTGCATCGTGCCAGGGCGGACCATGAACCTGAACGACTTTAAGGAgGTGGCCCAGAACGCGTTCAAGATGTACATTCCGCCCAACGAGGAGGCGAGCACGCGCACCATCGAGAACCTGTACTGGAAGTTAGTGCTGTTCGGGGCCGACCACGTGTGCGTCAACAGCGCCTCTATCGACACCGGCGATAACGGATACGGTTTTACCAAGAACAAGAACAGCTCGTATGGAAAACATCCGTGGAACTTGAAGATGATAAGCCAGAACAACGGTAACATCCTCCGTCCGCTGGGCGGAGTGCAGGGACTGACGGTGCCCACACTGCACCTGGGCATGATCTTCTCCACCAGCTGCTGGCACCGCGACCCGCACGGCCTGCCTTCGGTCGAGTACATGCACGAGGGACCGGAGAAGATATGGTATGGAATACCGGACGAACAAAGTCGAAACTTTCGTAATGCTGTGGAAGTACTGTGTCCCTCGGTGTGCCAGAACAAGGGTATTTGGCTGTCGTCAGACATCACCATGATACCTCCCAACATACTGCTAGAACACGAGGTGTCTTTATCCAAGATCACCCAGAAGCCGCGCGAGTTCGTCATAGTGTTCCCCAAGGCGTACTCCAGCTCCTTCTGCACGGGGTACACTATATCGGAGACCGTGTACTTCGCAACGCAGTCCTGGCTTAGTACGACGGATAGTGTATTCCAGGTTTTGAACAATTTGTCTTGTTTTCACAAGTATCGAGAACATtga
- Protein Sequence
- MNETPRLPPVKPIYLNEYIHRHIQPIVLVKRLENTLEAIQKERRIHNHSTQNQTIENQNAIKLPPHTITSSAQFTKKALKFTIRRSSRLRCKPSLNFKKATLSTNNIKPKGKIITTKRIIKYVKAPDDTADVLSALETEPSSESVQVQTIPASTDSNNAALYYGTNSIERWISESTKDITQSKDCKIPEVPQKKKKIDESAMKTPNVSKNINSPKHTCSEKNTRPASDIFCLAHNNLPQKTTLPTKTTPPAKTVPSKKTQLVKTASSANDALPANDAPPANAAPPPNATLLATAAPPAETTLQEDNTSPEKKICPSVKFLYLKDVLSASQEDIDIICNNCPRCEIIKKIVELSTLIQDTRKTTRSGTLDNDPHTDMTVSAHTNIPSPLVHGTSSRANNEDGQGLFYIDLLPATNKTVEVSWYKMPNRRDSLMRTRLVPKTNLTTPYEVTLSNNDTLLNKLLELYKEKLHETNLPQETEDVVLVNVPETNGDKQPSVTQPTTSSEKRPHPNDSTTNDAKKKKIENNFPRSLDRAKLVDAPVFYPTEAEFTDPISYFEKVMPIASQFGICKVVPPADFDPACTLSETNRFTVTNQYIPRLYTRWGPAFREMCAIRSYLASQNVHFTRAPLLEGLEVNLPKMYHTVQRLGGLMNVSDKKRWNRVAEKMHFYQLTNPRKKLEPIYVKYLLPYDTLTNRGRQLKVSEVEQMWQRKNKKMLARAINPLVRKKRLLGDSNSDSRSDHGVGSDSDEETSDHANDPLAEAEECIVPGRTMNLNDFKEVAQNAFKMYIPPNEEASTRTIENLYWKLVLFGADHVCVNSASIDTGDNGYGFTKNKNSSYGKHPWNLKMISQNNGNILRPLGGVQGLTVPTLHLGMIFSTSCWHRDPHGLPSVEYMHEGPEKIWYGIPDEQSRNFRNAVEVLCPSVCQNKGIWLSSDITMIPPNILLEHEVSLSKITQKPREFVIVFPKAYSSSFCTGYTISETVYFATQSWLSTTDSVFQVLNNLSCFHKYREH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -