Basic Information

Insect: Heliothis virescens
Gene Symbol: -
Assembly: GCA_002382865.1
Location: NWSH01000228.1:110457-123161[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.0014 0.082 13.2 0.7 2 23 197 218 196 218 0.91

2 5 0.00011 0.0065 16.6 1.4 1 23 224 246 224 246 0.95

3 5 1.9e-06 0.00011 22.1 0.9 1 23 252 274 252 274 0.98

4 5 4.3e-06 0.00026 21.0 4.9 1 23 280 302 280 302 0.99

5 5 0.0013 0.079 13.2 2.7 1 23 308 331 308 331 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.0014	0.082	13.2	0.7	2	23	197	218	196	218	0.91
2	5	0.00011	0.0065	16.6	1.4	1	23	224	246	224	246	0.95
3	5	1.9e-06	0.00011	22.1	0.9	1	23	252	274	252	274	0.98
4	5	4.3e-06	0.00026	21.0	4.9	1	23	280	302	280	302	0.99
5	5	0.0013	0.079	13.2	2.7	1	23	308	331	308	331	0.94

Sequence Information

Coding Sequence: atgttttccgatgaagaaataaaagaagaaatGCCGGAGAGTGGTTTCATGCGACCGGGTGATGAGATAATAAGCATACGTGAAGTGTGTTTGAGTGACAAGTTTGATAAGAAGGAATTGGGATTCAATGGGGAGCCGCTCCTATCGAATTCAGGGAGAAATGATCTGGACGTTCCCCGCTGTCTATTCCGGGATGGTTTCTTCTCGGACGGCCTGGAACCTCAGCAGGCCAGGTTCGCATGGACGGAGGAGGATGGCAACATCGCATCCCTGGTCTCCGAACCAGGGTTCGGCACCACTGGCCAAACTACTTTTGGCAAGGATTTGGATGCTGCGCTTAAGAGTGAGATGAAGGAAGCTGATACGTCAAGTTCAGTTCTTCAGCCAACCAACAGAAACGGGCTCACgttcagtaaaaaaatctttggcgAACCTCATCTAGTCTCTTCTACGTCTACTGCAGCTGCTGGGCCAgGTACCGACAGAAGTAAGGGCCCCGGCACGTGCAAGGTGGACAAGGCCGATCCTCGCTCCCGTTTCCACTACGTGAAGTACGTTAAGAGACATGGACGAACTGTTAAGTTGTGGGAATGTGGTATCTGCAGCCGCGAGTTCCAGCACCAATACACCCTCATGCGTCACTTACCAACGCACACGGATGAGAGAAACTTCCACTGCGTGGCTTGTGGGAAGAGCTTCAGGCAGCTATCAACCCTCAGCCAGCACCGAGCTATACATTCTGCTGAGAGGCCTTATGCTTGCGAGGTATGCAACAAAACGTTCAACCGCGTGTCCACCCTAATTTCTCACCGCAAGACCCACTCCGATGAGAAGCCTTACAAGTGCCATATCTGTCCCAAAGGATTCCATCAAAAAGGAAATCTTCGCAACCACCTATTCACACATACCAACGAGCGTCCTTACCGCTGCAACATCTGCTTGAAAGGATTCAACCAGCAGTCCAACTTGGTGTGCCATAAAAACAAGGCACATCCCGATGACAACAACTGTCCGCCAGTGAATGTTCGAGGAAGATCTACTACTCCAAGGATCACTCGTTCAGCTACTGAAACTCAACCAGATTCCACCAGACCTCAAGTGGAACACTGCGAAGTGACATCCTCAGTGGGACCATACCTCCCATCCGTCGAAGGTCCCTCGTCCTCAACTTGGAACCCAAAACCAGACCTCTGGGAAATCCCCAAACCTTACCTGGAAACTGGGGACATTTGGAACGATGGCCCATGGGGGTCTATGAGCAGTGGGGTCATTGTAGACCCCATAAAGACTTATCATATGGGGGTTGCGTTGGCTACAAGACAGACCCCGTTTGCGTTATTGAAGCCTGATAATGGAATTCCTGTGTTGGTGAAGGTTGTTGATACCAAGCTTCCAGGTGGTAAACAGATGCTTGTACCAGCAACAGCAGAAGATTTGAGGGTCGGCGGCAAAATTGTTCTGAAGAATGACGCTGAAGGTGGTGTTGTACAGCATGGTGACATAGAACCTCGACTAGAACCAAACGGCGCGGTTCAGATCCGAGTGCCGGTGGTAGCGACTGTGGTGCCTCGCATCAAGCCTGGCGGGAGACTCACCCTCAGTGTGGAGGAACCGCATCATGCTTACCATACTGCCTTATCTGCTGAcgTAGGTGAAGTAAACGTAGAGCCGTGCACCACCCGTGACGACCCTCGCGCCGGACCCTCCGCGCTCGCTCGCGCCGAGCCGAGGCGCCTCGACTCCTGCAGCGGGTTCGAAGACGGACTGAGGACTGGTACTCGAATATCTTCGACGTGCGCGTTGCCACCGCCAGCACCATCTCCGCCACTCGACCTCATCGCCATGGACCTGTTTGAACCCATGGAATGCATACCATTAGGACCTCAAATCACGGCAGTAGACAACATCGACCAGGCTCCACCTTCTGATGATTCCGACATCTTTATTGGGGAATTTGAGTCTAAGCCAGGAACTAGCCAGACTAGGCTAGGCCAGGATACAGGTATCCCACTGGAAGTCTTAGAACAAACAAATTCAGCATGA
Protein Sequence: MFSDEEIKEEMPESGFMRPGDEIISIREVCLSDKFDKKELGFNGEPLLSNSGRNDLDVPRCLFRDGFFSDGLEPQQARFAWTEEDGNIASLVSEPGFGTTGQTTFGKDLDAALKSEMKEADTSSSVLQPTNRNGLTFSKKIFGEPHLVSSTSTAAAGPGTDRSKGPGTCKVDKADPRSRFHYVKYVKRHGRTVKLWECGICSREFQHQYTLMRHLPTHTDERNFHCVACGKSFRQLSTLSQHRAIHSAERPYACEVCNKTFNRVSTLISHRKTHSDEKPYKCHICPKGFHQKGNLRNHLFTHTNERPYRCNICLKGFNQQSNLVCHKNKAHPDDNNCPPVNVRGRSTTPRITRSATETQPDSTRPQVEHCEVTSSVGPYLPSVEGPSSSTWNPKPDLWEIPKPYLETGDIWNDGPWGSMSSGVIVDPIKTYHMGVALATRQTPFALLKPDNGIPVLVKVVDTKLPGGKQMLVPATAEDLRVGGKIVLKNDAEGGVVQHGDIEPRLEPNGAVQIRVPVVATVVPRIKPGGRLTLSVEEPHHAYHTALSADVGEVNVEPCTTRDDPRAGPSALARAEPRRLDSCSGFEDGLRTGTRISSTCALPPPAPSPPLDLIAMDLFEPMECIPLGPQITAVDNIDQAPPSDDSDIFIGEFESKPGTSQTRLGQDTGIPLEVLEQTNSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01026787;
90% Identity: iTF_01222002;
80% Identity: -