Basic Information

Insect: Heliothis virescens
Gene Symbol: ZNF296
Assembly: GCA_002382865.1
Location: NWSH01001171.1:10891-18677[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 6e-05 0.0036 17.4 1.1 2 23 75 96 75 96 0.98

2 11 3.8e-05 0.0023 18.0 3.0 1 23 102 124 102 124 0.99

3 11 0.045 2.7 8.4 3.0 1 23 190 212 190 212 0.96

4 11 0.63 38 4.8 0.3 2 23 220 241 219 241 0.96

5 11 0.0011 0.063 13.5 2.2 1 23 247 269 247 269 0.96

6 11 0.00087 0.052 13.8 0.4 2 23 276 297 275 297 0.96

7 11 0.0085 0.51 10.7 4.1 1 23 306 328 306 328 0.99

8 11 0.0001 0.006 16.7 1.8 2 23 374 395 374 395 0.97

9 11 0.00032 0.019 15.1 3.5 1 23 412 434 412 434 0.98

10 11 5.9e-07 3.5e-05 23.8 0.7 1 23 440 462 440 462 0.98

11 11 6.9e-06 0.00042 20.4 5.3 1 23 468 491 468 491 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	6e-05	0.0036	17.4	1.1	2	23	75	96	75	96	0.98
2	11	3.8e-05	0.0023	18.0	3.0	1	23	102	124	102	124	0.99
3	11	0.045	2.7	8.4	3.0	1	23	190	212	190	212	0.96
4	11	0.63	38	4.8	0.3	2	23	220	241	219	241	0.96
5	11	0.0011	0.063	13.5	2.2	1	23	247	269	247	269	0.96
6	11	0.00087	0.052	13.8	0.4	2	23	276	297	275	297	0.96
7	11	0.0085	0.51	10.7	4.1	1	23	306	328	306	328	0.99
8	11	0.0001	0.006	16.7	1.8	2	23	374	395	374	395	0.97
9	11	0.00032	0.019	15.1	3.5	1	23	412	434	412	434	0.98
10	11	5.9e-07	3.5e-05	23.8	0.7	1	23	440	462	440	462	0.98
11	11	6.9e-06	0.00042	20.4	5.3	1	23	468	491	468	491	0.98

Sequence Information

Coding Sequence: ATGGATTCCGAGTTCGACGTGAAGGTCAAGCAGGAGGTGTCGGATGACGAGGGCGGGGCGGGTGACGGGGGGGACGCGGCGGATGATGCGGGTGACGGGGGCGGGGATGCCTTCGATGTTAAAGGGGAGGATGGTTCTTCAGACGAGGACTACTTCCCGTCCAACACGTGGGCGGCGCCGCCCCccccggcgccggcgccggcggcgcggcgcgggtcGCGCACGTGCCCGGTGTGCCACAAGCGCGTGTCCAGCGCCTCCTACATGCGCGTGCACGCGCGCACGCACACCGGCGAGCGCCCCTACAAGTGCTACCAGTGCGGACGCGGGTTCATCACCTCCAGCAAGATGCACAGGCATGTGCTGACCCATCAGACAGATAAAGGCGAGGACACAAAGGTAGAACCTGAAACAGAGACGCCGGCCGATGATCAGCCGACTGACACCCCCGCGGCCGAAGACGACGGCGACACCAAGCCAGCAAAGAAGAAGTCCAAAATGAAATCAAAGTCACCGAAAGCCGACAGCACAGGGGAGAAACCGCGACGCAAACATCAGAAGCGACCGCACGCCTGCGAGTACTGCAACCAGAAGTTCCTGCACCTCAACATGCTGGAGGTGCACCGGCAGTCTCACGCGGACGAGTCGAAGGTGCTGCGCTGTCAGTTCTGCCTGGAGACTTGCGCCGACGCAGAGGCGAGGGCGGAGCACCAGGCCACACACACGGGACCGAAGCCCTACCTGTGTACCATATGCGGCAAGCAGTATAAGAAGAGGGAGACTATGGTGTACCACCGCAAGCGCCACTCCTCAGACAAGGAGCTGGTCTGCGAGGTGTGCAGCAAGAGGTTCAGCGCGGCGTGCAAGCTGGCGGCGCACGCGCGCTCGCACGGGCGGGCGCGCGGCGTGCTGCGCTACGAGTGCCCCGTCTGCGCGCACCTGTTCCACACCGCCTACCACGTGCGCATGCATCTGCGCACGCACCAGCGGGAGGGACTCATCGGCGAAGAGAACCGCGCCGCCGTGCTGGCGATGGTGCTGCAGAACGCGCGCGCGCTGCCGGCGCAGGGCGCGGCGCCGCAGCTGACGGCCAGCATGCCGGCGGACGAGCGCTCCCGCGTCTGCAACATATGCGGGGAGGTGTTCCACCACTTCTACTACCTGGAGGAGCACCTCAAGAGCCACGGCTCCCGGATAGCCGTCGCCGACATGGACAAGCCGGAGGACAACAAGTACATCTGCCAGATATGCAACAAAGGCTTCAAGCTCCACTACTACCTGAAGCTGCACCTCTTCACGCACTCCAAGGAGAAGCCGTTCATCTGCCAGCAGTGCGGGAAGGGCTTCATCACTAAAGGCAAGCTCAAGAGGCACTTGGAGACTCACACGGGCCTCAAGAAGTACCAGTGTCATATCTGCTGCAAGTTCTTCACGAGGCCCAGCTACCTCCGGATACATATTCGAACTATTCATGGCACGCAAGATTATAATTTCAGCTTTGACAAGAGCTATGGCTTGCCGATGTCCCACGGGCCCATGTCAGACGTCACTCAGGGTAGTCTATGA
Protein Sequence: MDSEFDVKVKQEVSDDEGGAGDGGDAADDAGDGGGDAFDVKGEDGSSDEDYFPSNTWAAPPPPAPAPAARRGSRTCPVCHKRVSSASYMRVHARTHTGERPYKCYQCGRGFITSSKMHRHVLTHQTDKGEDTKVEPETETPADDQPTDTPAAEDDGDTKPAKKKSKMKSKSPKADSTGEKPRRKHQKRPHACEYCNQKFLHLNMLEVHRQSHADESKVLRCQFCLETCADAEARAEHQATHTGPKPYLCTICGKQYKKRETMVYHRKRHSSDKELVCEVCSKRFSAACKLAAHARSHGRARGVLRYECPVCAHLFHTAYHVRMHLRTHQREGLIGEENRAAVLAMVLQNARALPAQGAAPQLTASMPADERSRVCNICGEVFHHFYYLEEHLKSHGSRIAVADMDKPEDNKYICQICNKGFKLHYYLKLHLFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICCKFFTRPSYLRIHIRTIHGTQDYNFSFDKSYGLPMSHGPMSDVTQGSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -