Basic Information

Insect: Heliothis virescens
Gene Symbol: ZIPIC
Assembly: GCA_002382865.1
Location: NWSH01002900.1:15808-17440[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0034 0.2 11.9 0.5 2 23 160 181 159 181 0.97

2 11 0.00022 0.013 15.6 1.4 1 23 187 209 187 210 0.95

3 11 0.00028 0.017 15.3 0.3 1 23 217 239 217 239 0.98

4 11 1.3e-06 8e-05 22.6 0.8 1 23 245 267 245 267 0.98

5 11 3.3e-05 0.002 18.2 2.8 1 23 273 295 273 295 0.97

6 11 2.3e-06 0.00014 21.9 2.0 1 23 301 323 301 323 0.98

7 11 2.6e-07 1.5e-05 24.9 0.4 3 23 331 352 330 352 0.97

8 11 0.0011 0.067 13.4 0.6 2 23 358 376 357 376 0.79

9 11 0.00011 0.0067 16.6 1.0 1 20 382 401 382 405 0.91

10 11 0.01 0.6 10.4 0.4 1 23 411 436 411 436 0.94

11 11 7.6e-05 0.0045 17.1 4.5 1 23 442 465 442 465 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0034	0.2	11.9	0.5	2	23	160	181	159	181	0.97
2	11	0.00022	0.013	15.6	1.4	1	23	187	209	187	210	0.95
3	11	0.00028	0.017	15.3	0.3	1	23	217	239	217	239	0.98
4	11	1.3e-06	8e-05	22.6	0.8	1	23	245	267	245	267	0.98
5	11	3.3e-05	0.002	18.2	2.8	1	23	273	295	273	295	0.97
6	11	2.3e-06	0.00014	21.9	2.0	1	23	301	323	301	323	0.98
7	11	2.6e-07	1.5e-05	24.9	0.4	3	23	331	352	330	352	0.97
8	11	0.0011	0.067	13.4	0.6	2	23	358	376	357	376	0.79
9	11	0.00011	0.0067	16.6	1.0	1	20	382	401	382	405	0.91
10	11	0.01	0.6	10.4	0.4	1	23	411	436	411	436	0.94
11	11	7.6e-05	0.0045	17.1	4.5	1	23	442	465	442	465	0.97

Sequence Information

Coding Sequence: ATGGAGTCCAAAATATGCCGTATTTGTCTCAAGAAAACCGCGACAATGTCCATATTTGACAAGCAGGATGATATTCAATTCAGCACTAAGGTGATGCGATGCGTGAATGTGGCGGTGGTGGAGGGCGACGGGCTGCCCGAAAACATCTGCGGCGAGTGCGCTGCGGAGCTGTGCACGTCCTATGAGTTCGTGAACAAGTGCGAGGCGTCCGACAGGGCGCTGCGCTGCGCAGACATCACCAGCCTCTACGACGACCTGGTGCCCAAGACCGAACTACCCATCAAGCTAGAACAAATCAAGGAGGAGAGTGGAGCTGACGACCACGATCATTTTGATAATTACTTATTAGATACTGTCACTGAGTCTTGTAATGATTACACTGAGAACAAAGTCAAAGTTAAGAGAAAGTATACAAAGACGAAAAAGTTTAGAGATCATATTGATGGTAGGAAGTTAAAACCAAAATTGGGTCCAGTGAGATGCATGGTATGTGGGCTGGTGGCTTCATGTCGCTCTGCCCTGGAGAATCACATGAGGACCCACACCGGCGAGAAACCATTTGCATGTGACTCCTGTGGTGCTCGGTTCAACCTGAAGGGCACTCTCAAAAGACATACTATAACTCATCACACACAAAGAGAAAGGAAATTCATTTGTGAGACTTGTGGCAGCAGCTTCTTCTCAAAGAATGATATAATAACACACATAAGAGTCCACACTGATGAGCGACCATACTCCTGCTCGTACTGTGGGAAGGCATTCAGACAGATTGCTTCAATGATCAGACACAAACGCATGCACACCGGGGAGAAACCATTCTCTTGTCCCATCTGCTTCAAGAAGTTCATAGACATGAGCCACATGCAGCGGCACCAGTTTGTGCACTCTGATGAGAAGAACTTCACTTGTCACCTGTGCAGTAAATCTGTCAAGACTAGAAATGCCCTGACGGCTCATATGCGAATACACTCTAATGAAAAGCACAACATTTGCAATTACTGTGGTATGACATTCTCATTTAAAGGCAACCTGCAAGTTCACATAAGAAGAATACACTCTGAGAAGTCTGGTCAGTgcaatgtttgtttgaagacaTTCTCAGACTTGGAGGCTCACATGCGTAAACACACGGGTGAAAAACCCTTTGTGTGTAAGCTGTGTGATCAAAGCTTTGCAACCAAGCGAAGTTTGTCAAACCATGTAGGCTTTAAACATGAgaatgcttcaaagttcaaatgtTCTATTGGTGAATGCACTAAAACATTCCCAACGGCTATGATGCTGGAGTTCCACCTCCTCAAACAGCATACCAACCACACACCATACGTCTGCCATCACTGCTCCCGAGGGTTCTTCAGGATGAGTGATTTATCTCGACACCTCAAAGTTAGTCATATGGATACACTGGAGTCTAGAAGACCAAGACCACAGCTAACAGTGTCTCCAATCATTCAAAACAATTGTACTCTAGAGATTGTTAATCAGTGA
Protein Sequence: MESKICRICLKKTATMSIFDKQDDIQFSTKVMRCVNVAVVEGDGLPENICGECAAELCTSYEFVNKCEASDRALRCADITSLYDDLVPKTELPIKLEQIKEESGADDHDHFDNYLLDTVTESCNDYTENKVKVKRKYTKTKKFRDHIDGRKLKPKLGPVRCMVCGLVASCRSALENHMRTHTGEKPFACDSCGARFNLKGTLKRHTITHHTQRERKFICETCGSSFFSKNDIITHIRVHTDERPYSCSYCGKAFRQIASMIRHKRMHTGEKPFSCPICFKKFIDMSHMQRHQFVHSDEKNFTCHLCSKSVKTRNALTAHMRIHSNEKHNICNYCGMTFSFKGNLQVHIRRIHSEKSGQCNVCLKTFSDLEAHMRKHTGEKPFVCKLCDQSFATKRSLSNHVGFKHENASKFKCSIGECTKTFPTAMMLEFHLLKQHTNHTPYVCHHCSRGFFRMSDLSRHLKVSHMDTLESRRPRPQLTVSPIIQNNCTLEIVNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017562;
90% Identity: iTF_00784609;
80% Identity: -