Hvir002731.1
Basic Information
- Insect
- Heliothis virescens
- Gene Symbol
- Trm1
- Assembly
- GCA_002382865.1
- Location
- NWSH01000508.1:98144-115853[-]
Transcription Factor Domain
- TF Family
- NCU-G1
- Domain
- NCU-G1 domain
- PFAM
- PF15065
- TF Group
- Unclassified Structure
- Description
- NCU-G1 is a set of highly conserved nuclear proteins rich in proline with a molecular weight of approximately 44 kDa. Especially high levels are detected in human prostate, liver and kidney. NCU-G1 is a dual-function family capable of functioning as a transcription factor as well as a nuclear receptor co-activator by stimulating the transcriptional activity of peroxisome proliferator-activated receptor-alpha (PPAR-alpha) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-96 1e-91 307.3 0.4 1 346 601 935 601 936 0.95 2 2 8.2e-80 1.2e-75 254.4 0.0 71 352 934 1209 932 1210 0.94
Sequence Information
- Coding Sequence
- ATGAATGTACTAAAATATCGTAGAATAGCTACGATTGTTACTCAGaaaattatgaaaatggaTGCTTCTACAAGTCAGAAGTCGATAAAAGAAGGGAAGGCTGAAATATGCCTCAAAACTGAGAAGGTATTTTACAACCCAGTGCAGGAATTCAATAGAGATTTAAGTATTGCTGTCTTGAGTATATTTACCAGTGACTTTAAAGCTGAGAAGATTGCAAAGGCTGAAAAGAAGGCGAAgaatagaatattgggaacgaagGAGGATGTTGAAGGAGGCGAAGGGGATTCCGAGATAGACATATCAATTCTAGAAGCATTATCGGCAACCGGACTACGAAGCATTCGGTACGCTAAGGAAGTACCAAACGTAACTAAGATAGTTGCCAATGACCTATCGGAGCAAGCGGTGGAGACTATTAAAGCTAATATTGTACATAATCAGGTGGAACACTTGATTGAGACTAGCCATGACGATGCTTGCATGGTGAtgtacaaacacaaacaaacctCCAAGCGGTTTGCAGCAATAGACCTAGATCCATATGGTTGTCCTTCTGTATTCCTGGACTCGGCAGTCCAAAGTGTGCAGGACGGAGGCCTATTGCTCATAACTGCAACAGACATGGCAGTACTGGCTGGCAACTCTCCTGAAACATGCTACTGTAAATATGGTGCTATTAGTATGAAAACTAAGTGCTGTCATGAAGTAGCTCTAAGAATAATGCTGCAATGCATAGAATCGCACGCAAATCGCTATAGCCGTTACATAGTGCCGCTGCTCAGTATATCTGCTGACTTTTATATAAGGGTGTTTGTGAAGGTCTACACTGGCGCTATTCATTGTAAGAAAACTACTAGCAAGCTATCAATGGCATACCAGTGTACTGGCTGCGACAACATAACCCTGCAACCGCTGGGGGGATTCAAGCCGAACCCTACGGAGCGCAACCCCTCCCAGACGAAGGCGTACCTGCCCTCCGCGCCACCTGTCGGCGAGTTTTGTGCTAATTGTAATCAGAGGCATCATCTAGGAGGTCCCCTCTGGTCAGCACCAATCCACGACGAAGTCTTCGTATCCCGGGTGCTAACCCATGTGGAAGACAACCCGGATCTCTTCGGCACCTCCAAGCGTATAGCCGGAGTACTGGCCATGGTGCGCGAAGAGTTGCAGGATGTACCGCTATACTATACCATGGATAAACTGTTCGGGAGGGTGCATTTGGAAACTATGCCTATGTTGGTTATGAGGTCAGCAATATTAAACGCGGGCTACAAGGTATCGTACTCGCACGCCTCGCGCATGTCCATAAAGACAGCTGCGCCGGCGCAGCTCGTGTGGGACATCATCAGGACGTGGGCCAAGACACATCCCGCTAAACCTGCCAAACTAGAAGCAGACCCCGTAGCTCGTTACATTCTATCTCAAGAAATTAAAACAGTGATCGACTTGAGCGAGCGCAGTGACGCCAACCCCATCAGCCGGCGCGACGGCCGTCTGCGCTTCCAGTACAACCCCACGCCGCACTGGGGACCCGGCTCCAGGGCTGCTGTTAATGTGGGAGAAGAGAAGATGACCAAAGCTCTCAAAAATCAAAACAAGCACAGCAAGGATAAAAAGAATAGCAAGAGGCAGCACTCACCAAGCGATGacgaagaaagaaagaaagccAATATAGGCGATGAaactgttttGATGCATTTACagactttatttattgtatttctaCTATCATTTGCGTGTGGACAAGATAGACAGATAATATCAAGCCTAAACCCTGGCTGTGAGAACTGTGACGTCACCCTCGTGTACATCAAGGCAGTTGGCAGCCATGACACGGTCCACCAGCTGTGGGACTTCTCCCGAGGAATGCCGACCATCATATACCTCATCACGAAGCTCAACTCCACGGTAGCAGTGACCTGGGAGGGCCAACAGCCGAGCCAGTTTAAGATCATTGAGAAACCAGTTTATAGTTTTGCTGCAACTATTGATAAGctGCAAGAATACAACGACATAAACAGCAATGGGCACATAGACAACAAATGTCCGCAGCGGCCTGTCCCCCTGCGCGATGTAGTGTGGAAGCGAGGAGACACCGTCCTCACCGGGGACGAGGTCATGGTGCATATGCGAGGATACTTCCCCGACAGCCGGCAGAAGGGGACCCTTGATATGAAGCTAGACCTGCTCCCCTTCAAAGACTACGCAGTGGAGCTCCCCCACCTCATTCACACGGCGAACTCGACCCTCGTGGACGTCAGCCTGGTGAACCTGACGACCTCTCGCGATTACAACGCGTCGCGGTTCGCGATACACATCACCATGGTCAGCACGGACGCCTGGAGCGACGCCATGAGTTACACCATGAGGAAGAGCCTCGATGATGAGCATACTCCTGGCGTGTTCGAGATCTTCGAGATAAAGACGCCGCGCTCCGTAGCGTCAGACGACGGCGGCTACGTGCAGTTCCGGCCGGTCAGCTATACGGAGCCCGAGCGAAGTGTCTCGTCCTCCACCAACGCTTACATCACTAACTTTACTAGTACACACCTCCCCAAATCGAGCACTCTGCGTATATTCTACCGCGACTTCAATCGTGACAACCTGCTAGTACAGGACACGTTCATATCGTTCGGCCTGCCCGGAGACGGCAACTATAAGCAACATAACTATACTTCTTGGTCATTCACAATAGGCTACGGAGTTCCCCCAGTAGAAAAATTCTCCCTCTTCGTGATCATCATTATATCGATCGGCCTAGGCGTGCCAGTACTCCTAGCCGTATCAGGCATCGCTTATctGCAAGAATACAACGACATAAACAGCAATGGGCACATAGACAACAAATGTCCGCAGCGGCCTGTCCCCCTGCGCGATGTAGTGTGGAAGCGAGGAGACACCGTCCTCACCGGGGACGAGGTCATGGTGCATATGCGAGGATACTTCCCCGACAGCCGGCAGAAGGGGACCCTTGATATGAAGCTAGACCTGCTCCCCTTCAAAGACTACGCAGTGGAGCTCCCCCACCTCATTCACACGGCGAACTCGACCCTCGTGGACGTCAGCCTGGTGAACCTGACGACCTCTCGCGATTACAACGCGTCGCGGTTCGCGATACACATCACCATGGTCAGCACGGACGCCTGGAGCGACGCCATGAGTTACACCATGAGGAAGAGCCTCGATGATGAGCATACTCCTGGCGTGTTCGAGATCTTCGAGATAAAGACGCCGCGCTCCGTAGCGTCAGACGACGGCGGCTACGTGCAGTTCCGGCCGGTCAGCTATACGGAGCCCGAGCGAAGTGTCTCGTCCTCCACCAACGCTTACATCACTAACTTTACTAGTACACACCTCCCCAAATCGAGCACTCTGCGTATATTCTACCGCGACTTCAATCGTGACAACCTGCTAGTACAGGACACGTTCATATCGTTCGGCCTGCCCGGAGACGGCAACTATAAGCAACATAACTATACTTCTTGGTCATTCACAATAGGCTACGGAGTTCCCCCAGTAGAAAAATTCTCCCTCTTCGTGATCATCATTATATCGATCGGCCTAGGCGTGCCAGTACTCCTAGCCGTATCAGGCATCGCTTATGTCCTAGCCCGAAGGTGTAAGCAAAGAAACCCACCCACAAGATTCACTGATGACGAGTAA
- Protein Sequence
- MNVLKYRRIATIVTQKIMKMDASTSQKSIKEGKAEICLKTEKVFYNPVQEFNRDLSIAVLSIFTSDFKAEKIAKAEKKAKNRILGTKEDVEGGEGDSEIDISILEALSATGLRSIRYAKEVPNVTKIVANDLSEQAVETIKANIVHNQVEHLIETSHDDACMVMYKHKQTSKRFAAIDLDPYGCPSVFLDSAVQSVQDGGLLLITATDMAVLAGNSPETCYCKYGAISMKTKCCHEVALRIMLQCIESHANRYSRYIVPLLSISADFYIRVFVKVYTGAIHCKKTTSKLSMAYQCTGCDNITLQPLGGFKPNPTERNPSQTKAYLPSAPPVGEFCANCNQRHHLGGPLWSAPIHDEVFVSRVLTHVEDNPDLFGTSKRIAGVLAMVREELQDVPLYYTMDKLFGRVHLETMPMLVMRSAILNAGYKVSYSHASRMSIKTAAPAQLVWDIIRTWAKTHPAKPAKLEADPVARYILSQEIKTVIDLSERSDANPISRRDGRLRFQYNPTPHWGPGSRAAVNVGEEKMTKALKNQNKHSKDKKNSKRQHSPSDDEERKKANIGDETVLMHLQTLFIVFLLSFACGQDRQIISSLNPGCENCDVTLVYIKAVGSHDTVHQLWDFSRGMPTIIYLITKLNSTVAVTWEGQQPSQFKIIEKPVYSFAATIDKLQEYNDINSNGHIDNKCPQRPVPLRDVVWKRGDTVLTGDEVMVHMRGYFPDSRQKGTLDMKLDLLPFKDYAVELPHLIHTANSTLVDVSLVNLTTSRDYNASRFAIHITMVSTDAWSDAMSYTMRKSLDDEHTPGVFEIFEIKTPRSVASDDGGYVQFRPVSYTEPERSVSSSTNAYITNFTSTHLPKSSTLRIFYRDFNRDNLLVQDTFISFGLPGDGNYKQHNYTSWSFTIGYGVPPVEKFSLFVIIIISIGLGVPVLLAVSGIAYLQEYNDINSNGHIDNKCPQRPVPLRDVVWKRGDTVLTGDEVMVHMRGYFPDSRQKGTLDMKLDLLPFKDYAVELPHLIHTANSTLVDVSLVNLTTSRDYNASRFAIHITMVSTDAWSDAMSYTMRKSLDDEHTPGVFEIFEIKTPRSVASDDGGYVQFRPVSYTEPERSVSSSTNAYITNFTSTHLPKSSTLRIFYRDFNRDNLLVQDTFISFGLPGDGNYKQHNYTSWSFTIGYGVPPVEKFSLFVIIIISIGLGVPVLLAVSGIAYVLARRCKQRNPPTRFTDDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -