Basic Information

Gene Symbol
-
Assembly
GCA_002382865.1
Location
NWSH01000851.1:147041-153695[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.38 2.6e+02 1.6 0.3 3 14 73 84 71 127 0.84
2 7 0.0042 2.9 7.8 0.0 21 44 340 364 333 366 0.87
3 7 0.00011 0.073 12.9 0.4 10 45 424 464 412 465 0.69
4 7 0.00099 0.67 9.9 0.2 22 46 576 610 564 610 0.75
5 7 5.1e-05 0.035 14.0 0.1 3 44 661 711 659 713 0.88
6 7 8.9e-05 0.06 13.2 0.1 13 42 838 874 823 878 0.81
7 7 0.018 12 5.8 0.1 3 15 1032 1044 1030 1091 0.80

Sequence Information

Coding Sequence
ATGGAGTCCATAGTTGTGAAAACTGAAATGCAACCCAATGGGGAAATATTGCTATTCTATGTTGATGaaAATGGTGGCAACGAGGAAGGTGTGCTAACAACAGTTGAGAACATAGAAAACCAAGCAATACAACTCCAGCAAGATGACTCTTACATAATACCGGACGTCGGAGACGATCCTAACGAGATGAACATTGATCTATCCGCACTCACTGACAACTGGACCGAGGAAGACACTAAAAGACTCCTCGTATTCTACAATGATAATAAACAGACTTTCATATCCGGAACAACTAAGAAAAAACATCTTTGGACTGTGGCTTGCAAAACCATGCTTATCGGTAAGACCCCGACTGCGTGTGAAGCTAAACTCCTCAGTCTCCAAGCCAAGTACAATGAAATCTGTAGCCATATACAAAAAGGGGTCTACATAAAATGGCCGTACTTTGAACTGTGCCATCAAACATTCCAGGATGACACCCCTGTGATCACCGTTGAAACCTTAAACACTCTGGAACCACAAATAATCAAAGTTCCCGCTTTAAAACAGAATTTTGACAATGTCATGGTGGTGAAGAAGGTGAATAGTCGAGCTGATGAGAAGGTGGAAATGATGTTAAACTTGTATTTGAAGTACAAGAAGAACTTTCAAGAGGAGTACTGGAGACGGGGTATATGGGAGACTATTGCCCTAGAGTTGGGGGAGGATAATGGAGAGTACTGGCAAAAGCGCTTCTTGAACTACAAACAACACTACTTAAGATTACTGGACAAGAGACAAGAAAGTGGCTCCGAAGGCATCAATTGGCCCTACATGGATCTATTTGACAAAATATTCGAAGGTGATGAAGATTTCCATAGAAAATATCTAAATGAAGAGTACACTTTGATTGAAAATGAAGCAATATCTGAGGTGGAGGAACCGCCAAGAATTGAAGATTGGGACAGTACCGAAATGACTGTACTAGTGAAGTACTGTTTTGACTGCTTCGAAGAGTTCGAAGACCCTACAATTCCCAACAATTTCTTATGGAATGAGATTGgccgattattagacaagacagCTGACAATTGCAAGTCTAAGTACGAAGAGCTTAAAAACGAGCATTTAGACAAGTACATAGCTGGAGGCTATGACTTACGAACAAGGAAAACTATTGAGATTTTATTTGACAACATAATATCTAAAGAAGTCGAGATTCAAATGTCTAAAGCTGGCAGGAAGCCTGAATTTGAGTCATGGAAGACAGAAGAATTGGATGAACTGGTTCAGTTCTTCTATGAGAATATAGAGATGTATAAAGACGTGATCTGCCACTTTGTTTGTTGGGCAGCAGTAGTTAAGAAGATGAAAAGAACTATGCAGAGTTGCAAAAGTCAGTGGGAAGATTTATTAAGCCTGTATAAGACGATATTGAATGATAAGAAAGAAAACCCCGATATGCAGATAGATTGGCGGTACATAGAGATTTTTGATAGGATATTTGACTATGGAATGGATACTAATTTGCTTTCCGGGTATGAAAATTTGAAGGGCGAAAGTAACAATGACTCGGGGAAGGTTGGTGtaaaaaaagtaaatatcaaAACTGAGGACTCCATGAATGAAGAGTTAAGTGAGGACGAAGAGTCCTACGATGAGCGCGGTTTCACCAAGCGCACGAAACGACGCTCCGGAGACTCGAAAGCTTTCAAAATCCTCGAGTACTACCAGAAGAATAAAGACAAGTTCTCTACAACCAATAGGAACAAGCATTCCTTATGGGAATTACTGGCTAAACAGCTGGGGATATCGGCAACACAATGTGCTCATAGGTTCAGGAATCTTAAACAGGTGTATACAGCTTATGTACAGAGAGAGATCAATAAACCAGAGATGCCAATCCTCTGGCCTTATTACGCTCTTTGCAAGAAAGTCTTCGGCTACCGAGCAATAAAATCTAAACTCAAAAACGGTAAAATAGACTCCGATGACAGCGAAGACTGGTcagtaaaagaaataaaacaattatttaattatttctcaCAAAACTTctatgaaattaataataatattgatgacTCTTCCAAATGGTCGGATTTGGCTGGTGAGATAGGTAAAAGTGAGAATTCTTGCCGTGAAAAGTTTATTGAACTTCGAAAGTCTTACCGCAAGCTGAAAACTATGAGGACCAGGAACCCTGATGTTAAAATCTCTTGGAAGTACTttaatatgtttgaaaatatttataatagcaAGGAGAatggtgtttcggaaggtatgGAAGTCGATGAGACGTATGTCGAAATACCCATGGGGTCTGATGAGAAGAATGAACAAGAAGAAGACGATTATCAATGCATCATAGTCATTCCAGAAGGTCAAGATTTGTCACAGATAGAAAACGCTCAGTTCATAATACAAGAACAACTTGACACAGATTCACAGGAAACTATCAATGAAGAACCTACAAAACCCGTCAAACTCGTCAAATGGACCAAGAGAACTAAAAAGAGGCTACTTATCTTCTATATAAACTACATAAGATCGCATAAAGGAAAAGAAATTATTGCCAAAGatatgtgggcagaaatagcaGGCAAACTACCAGATAAAACTCCGCTTTCCTGCAGAAAAATGTTTGCTAAACTCAAGGCAAACCATAAACAGGTCGACGAAACAGATCCGAATGCAAAGAAAACTCCATATTACTCGTTAATGGAAAAAGTAATGCGATTGAAACCAAAATTCGCCAAAACGCAACAAAATAAAGCGCTAAAAGATGGAAAAGTATACAAAGATGTATCTTTACCTGATGATAAGGTCACACAAGCATTGCAATACTATTTAGAAAATATAGAAGACTTTGTTAGTCCACGATTTGAGAAAAAATACCTATGGACTGAATTGGCTAACTACATTTGTGAGCCGGTAACAAAAgtgtttaacaaaattaattatttgaaacaatACTACAGCAATGAACCGTCTGATGATGCAGAAAAAGCTCCTTTTGCTGACCTAGTAAAGGAAATATTAGCTAAAGAGATagctataaaattatttttggaaaatcaaCCGAAACCAGTTATTGAAGAATCTTGTGTAGAAGAGACTTGGACAGACGAAGAGACGGAACAACTTTTGGAATGGTATCTAAGCAATTTGGATAAATTCAAGAACCCTAAATTTGTGAGAAGTTACTTATGGATGGAAGTTTCTAGTATGTTGAATAAGAGTGCCATCACTTGTTCGAAGAAAATGTCTGAAATTAGGACACAGTATAGAAATATGGTCAGAGAAAGACCTGAGGAGTTGAATGAATGGAGGTTCCTTGATCTCTGTCAAAAGATCTATGGGACTGGAAAGAAAGCGGCACAGGCTAACACTAATTAA
Protein Sequence
MESIVVKTEMQPNGEILLFYVDENGGNEEGVLTTVENIENQAIQLQQDDSYIIPDVGDDPNEMNIDLSALTDNWTEEDTKRLLVFYNDNKQTFISGTTKKKHLWTVACKTMLIGKTPTACEAKLLSLQAKYNEICSHIQKGVYIKWPYFELCHQTFQDDTPVITVETLNTLEPQIIKVPALKQNFDNVMVVKKVNSRADEKVEMMLNLYLKYKKNFQEEYWRRGIWETIALELGEDNGEYWQKRFLNYKQHYLRLLDKRQESGSEGINWPYMDLFDKIFEGDEDFHRKYLNEEYTLIENEAISEVEEPPRIEDWDSTEMTVLVKYCFDCFEEFEDPTIPNNFLWNEIGRLLDKTADNCKSKYEELKNEHLDKYIAGGYDLRTRKTIEILFDNIISKEVEIQMSKAGRKPEFESWKTEELDELVQFFYENIEMYKDVICHFVCWAAVVKKMKRTMQSCKSQWEDLLSLYKTILNDKKENPDMQIDWRYIEIFDRIFDYGMDTNLLSGYENLKGESNNDSGKVGVKKVNIKTEDSMNEELSEDEESYDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTNRNKHSLWELLAKQLGISATQCAHRFRNLKQVYTAYVQREINKPEMPILWPYYALCKKVFGYRAIKSKLKNGKIDSDDSEDWSVKEIKQLFNYFSQNFYEINNNIDDSSKWSDLAGEIGKSENSCREKFIELRKSYRKLKTMRTRNPDVKISWKYFNMFENIYNSKENGVSEGMEVDETYVEIPMGSDEKNEQEEDDYQCIIVIPEGQDLSQIENAQFIIQEQLDTDSQETINEEPTKPVKLVKWTKRTKKRLLIFYINYIRSHKGKEIIAKDMWAEIAGKLPDKTPLSCRKMFAKLKANHKQVDETDPNAKKTPYYSLMEKVMRLKPKFAKTQQNKALKDGKVYKDVSLPDDKVTQALQYYLENIEDFVSPRFEKKYLWTELANYICEPVTKVFNKINYLKQYYSNEPSDDAEKAPFADLVKEILAKEIAIKLFLENQPKPVIEESCVEETWTDEETEQLLEWYLSNLDKFKNPKFVRSYLWMEVSSMLNKSAITCSKKMSEIRTQYRNMVRERPEELNEWRFLDLCQKIYGTGKKAAQANTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00771874;
90% Identity
iTF_00785147;
80% Identity
-